FFCP PHASE1:Hg19::chrX:153136578..153136582,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3897 | |EntrezGene=3897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6470 | |HGNC=6470 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-163bp_to_uc004fjd.1_5end | |association_with_transcript=-163bp_to_uc004fjd.1_5end | ||
|cluster_id=chrX:153136578..153136582,- | |||
|description=CAGE_peak_3_at_L1CAM_5end | |description=CAGE_peak_3_at_L1CAM_5end | ||
|id=chrX:153136578..153136582,- | |id=chrX:153136578..153136582,- | ||
|ontology_enrichment_celltype=CL:0000066!1.29e-12!254 | |ontology_enrichment_celltype=CL:0000066!1.29e-12!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.39e-11,253 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.62e-09;3!UBERON:0008947;2.45e-07;29 | |||
|ontology_enrichment_disease=DOID:305!8.78e-10!106;DOID:0050687!4.46e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.37e-10,106;DOID:0050687,1.21e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.64e-19!86;UBERON:0001017!1.70e-19!82;UBERON:0000073!1.70e-18!94;UBERON:0001016!1.70e-18!94;UBERON:0001049!1.69e-16!57;UBERON:0005068!1.69e-16!57;UBERON:0006241!1.69e-16!57;UBERON:0007135!1.69e-16!57;UBERON:0002619!1.34e-15!22;UBERON:0000955!2.17e-15!69;UBERON:0006238!2.17e-15!69;UBERON:0001950!1.41e-14!20;UBERON:0001869!3.18e-14!32;UBERON:0002780!3.79e-14!41;UBERON:0001890!3.79e-14!41;UBERON:0006240!3.79e-14!41;UBERON:0002020!5.84e-14!34;UBERON:0003528!5.84e-14!34;UBERON:0001893!9.56e-14!34;UBERON:0003080!1.45e-13!42;UBERON:0002791!2.79e-13!33;UBERON:0000956!6.99e-13!25;UBERON:0000203!6.99e-13!25;UBERON:0002616!9.39e-13!59;UBERON:0003075!4.31e-12!86;UBERON:0007284!4.31e-12!86;UBERON:0004121!8.82e-12!169;UBERON:0002346!1.44e-11!90;UBERON:0000924!1.62e-11!173;UBERON:0006601!1.62e-11!173;UBERON:0001737!1.29e-10!9;UBERON:0003056!3.05e-10!61;UBERON:0000033!3.35e-10!123;UBERON:0007023!7.04e-10!115;UBERON:0000153!2.04e-09!129;UBERON:0007811!2.04e-09!129;UBERON:0000064!5.18e-08!219;UBERON:0001871!7.56e-08!7;UBERON:0000062!2.60e-07!511;UBERON:0000922!6.63e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.48e-23;9!UBERON:0001557;1.48e-23;9!UBERON:0001950;4.02e-10;20!UBERON:0002619;4.62e-09;22!UBERON:0002791;2.63e-08;32!UBERON:0001869;5.34e-08;32!UBERON:0000956;8.78e-08;25!UBERON:0000203;8.78e-08;25!UBERON:0001893;5.08e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.70e-24,9;UBERON:0001557,3.04e-10,19;UBERON:0001950,6.41e-10,20;UBERON:0002619,7.01e-09,22;UBERON:0002791,3.48e-08,32;UBERON:0001869,3.48e-08,32;UBERON:0000956,1.26e-07,25;UBERON:0000203,1.26e-07,25;UBERON:0003528,1.43e-07,34;UBERON:0002020,1.43e-07,34;UBERON:0001893,1.43e-07,34;UBERON:0001049,2.15e-07,56;UBERON:0005068,2.15e-07,56;UBERON:0006241,2.15e-07,56;UBERON:0007135,2.15e-07,56;UBERON:0001017,5.51e-07,81;UBERON:0000073,5.86e-07,53;UBERON:0002616,5.86e-07,53;UBERON:0010371,9.75e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0.741800787835671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0.57978255948989,0,1.14721838155602,0.121973706129595,0.132529768321485,0.580969714347592,0.10366105501537,0,0,0,4.5026865673502,0,0,0,4.96888560167344,5.22612539242115,1.92808823906786,5.95587452754927,4.57546832594053,4.03360052488864,5.66291494272691,4.31687223275761,3.46272441251751,0.738155454624648,0,0,0,0,0,0,0,0.860919069801795,0,1.86575485194663,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.766765358330422,0,0,2.69526550203004,1.15295962733569,2.5248486685276,0.698476837213859,1.52795370223311,0,6.84289784090821,4.21592720083626,5.40617504119051,1.71495859578347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.670065061337395,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955719759148911,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,7.41873940122154,0,0,0,0,1.80479845162965,0.616122696835318,0,0,0.316654886678627,0,0,0,0,0,1.00337954770971,0.764628819135115,4.15538004464362,3.35812132083267,0,0,0,0,0.325378394664303,0,0,0,0,3.90036147621913,0,0,0,0,0,0,0.145016693914229,0,0.178064071293475,1.32227932288782,0.576570202095319,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0.86101074534246,1.68471475667626,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,3.99227596002388,0.7812832832557,0,0,0,0,0.236387681767936,0.344743373241465,0,1.90987494426621,0,1.4471572635049,4.5774520895125,4.31259113731776,3.84211904639612,0.87754158861589,0.10893846351899,0,0,0.341826167541004,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0.104421949505455,0.067401132980677,0,0.937057782901357,0,0,0.242780379534093,0.394584402849391,2.41981432097328,5.20323694771833,0,0,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0,0.261177619741208,0.52418000472609,0,5.12808555832151,4.09300175682639,3.85942648150083,0.290967049465258,0,1.35588444468319,0,0,0.569797163602908,0.195551382734803,0.160317640503067,0.213452994739353,11.7887669653457,0,0,0,0,0,0,0.543616824294456,1.255234155748,0.305994652908965,0,0,0.273810757783986,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.272406812223151,0,0.550157746388935,0.83088067605837,0,0,0.425246896606173,0,0.236417121897595,0.209818352539992,0,0.537862017998534,0,0.714695326373367,0.662091970365432,0,0,0.864221491201268,0.326587360109409,1.19730191562487,0,0,0.679872549120754,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,4.27091927156871,1.1267183763585,0,0.665574309221114,0,0.276697269872462,0,0,6.85116800507922,0.235265819698172,0.468334905806882,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.310525913752519,0,0,1.04349012362347,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0.192619830407303,0,0.782982875895635,1.58694147858591,1.85217979459067,0.489473409012935,0.895444205407437,1.23520578864389,0.438568099157414,0.530067437837643,1.3503982678964,0,1.53744911152768,2.07258205038719,0.303859956177382,0.553033744606923,0.194860308839388,0,0,14.7424431980886,10.3224621676562,0,0,0,0,0,0,0.139879507719444,0,0.639471856518258,0.323474434190045,0,0.873677105536111,0,0.425149840203366,0,0,0,0,0,0,2.1437183414724,0.321146125482298,1.41696576325585,0.638535436228605,1.02558182120378,2.26864526599546,0.553258019713743,1.77623210195036,0,0,0,0,0,0,0,0,0.0752103283492573,1.41193548092464,0.781514011233092,0,9.00745546305532,0.295712172434091,0.337687923091973,0,0.413373593002368,0.253663240775627,3.82882366312754,0.548257766857182,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0,1.71488009437418,0.339848664884159,0.72350050919134,0,0,0.156986185701028,1.72827148907602,0.280272163313789,0.913158720509496,0,0,0.500335809236594,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,8.2478472675858,0.31020638566432,1.911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| ||
|short_description=p3@L1CAM | |short_description=p3@L1CAM | ||
}} | }} |
Latest revision as of 01:06, 20 September 2015
Short description: | p3@L1CAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_L1CAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -163bp_to_uc004fjd.1_5end |
EntrezGene: | L1CAM |
HGNC: | 6470 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.39e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.70e-24 | 9 |
upper respiratory tract | 3.04e-10 | 19 |
neocortex | 6.41e-10 | 20 |
regional part of cerebral cortex | 7.01e-09 | 22 |
regional part of telencephalon | 3.48e-08 | 32 |
cerebral hemisphere | 3.48e-08 | 32 |
cerebral cortex | 1.26e-07 | 25 |
pallium | 1.26e-07 | 25 |
brain grey matter | 1.43e-07 | 34 |
gray matter | 1.43e-07 | 34 |
telencephalon | 1.43e-07 | 34 |
neural tube | 2.15e-07 | 56 |
neural rod | 2.15e-07 | 56 |
future spinal cord | 2.15e-07 | 56 |
neural keel | 2.15e-07 | 56 |
central nervous system | 5.51e-07 | 81 |
regional part of nervous system | 5.86e-07 | 53 |
regional part of brain | 5.86e-07 | 53 |
ecto-epithelium | 9.75e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.37e-10 | 106 |
cell type cancer | 1.21e-08 | 143 |