FFCP PHASE1:Hg19::chr3:10291107..10291123,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC009749_5end | |association_with_transcript=0bp_to_BC009749_5end | ||
|cluster_id=chr3:10291107..10291123,- | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_1_at_BC009749_5end | |description=CAGE_peak_1_at_BC009749_5end | ||
|id=chr3:10291107..10291123,- | |id=chr3:10291107..10291123,- | ||
|ontology_enrichment_celltype=CL:0000766!1.11e-22!76;CL:0000738!4.21e-21!140;CL:0000557!6.93e-21!71;CL:0000860!5.18e-20!45;CL:0002057!2.57e-19!42;CL:0002009!1.75e-18!65;CL:0000839!5.48e-18!70;CL:0000037!8.05e-18!172;CL:0000566!8.05e-18!172;CL:0002194!1.44e-17!63;CL:0000576!1.44e-17!63;CL:0000040!1.44e-17!63;CL:0000559!1.44e-17!63;CL:0000763!2.03e-17!112;CL:0000049!2.03e-17!112;CL:0000988!3.07e-17!182;CL:0002032!1.35e-16!165;CL:0000837!1.35e-16!165;CL:0002031!6.03e-16!124;CL:0002087!8.29e-16!119;CL:0000048!1.51e-12!430;CL:0000034!1.81e-12!444;CL:0000723!7.63e-12!436;CL:0000134!1.94e-11!358;CL:0002320!2.87e-11!365;CL:0000012!1.69e-10!682;CL:0000548!1.06e-09!679;CL:0000004!1.06e-09!679;CL:0000255!1.06e-09!679;CL:0000219!2.93e-09!390;CL:0000144!1.66e-08!625;CL:0000003!7.85e-08!722;CL:0002371!1.03e-07!591;CL:0000063!6.66e-07!578 | |ontology_enrichment_celltype=CL:0000766!1.11e-22!76;CL:0000738!4.21e-21!140;CL:0000557!6.93e-21!71;CL:0000860!5.18e-20!45;CL:0002057!2.57e-19!42;CL:0002009!1.75e-18!65;CL:0000839!5.48e-18!70;CL:0000037!8.05e-18!172;CL:0000566!8.05e-18!172;CL:0002194!1.44e-17!63;CL:0000576!1.44e-17!63;CL:0000040!1.44e-17!63;CL:0000559!1.44e-17!63;CL:0000763!2.03e-17!112;CL:0000049!2.03e-17!112;CL:0000988!3.07e-17!182;CL:0002032!1.35e-16!165;CL:0000837!1.35e-16!165;CL:0002031!6.03e-16!124;CL:0002087!8.29e-16!119;CL:0000048!1.51e-12!430;CL:0000034!1.81e-12!444;CL:0000723!7.63e-12!436;CL:0000134!1.94e-11!358;CL:0002320!2.87e-11!365;CL:0000012!1.69e-10!682;CL:0000548!1.06e-09!679;CL:0000004!1.06e-09!679;CL:0000255!1.06e-09!679;CL:0000219!2.93e-09!390;CL:0000144!1.66e-08!625;CL:0000003!7.85e-08!722;CL:0002371!1.03e-07!591;CL:0000063!6.66e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-37;33!CL:0002057;1.54e-37;33!CL:0000473;6.07e-34;39!CL:0000234;6.07e-34;39!CL:0000576;4.15e-23;48!CL:0000766;1.19e-22;69!CL:0000763;8.05e-12;100!CL:0000094;4.84e-10;8!CL:0000738;4.35e-08;136!CL:0000775;6.64e-08;3!CL:0000081;4.66e-07;11!CL:0002087;6.34e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.80e-47,72;CL:0000473,4.77e-47,48;CL:0000234,4.77e-47,48;CL:0000860,9.84e-43,42;CL:0002057,9.84e-43,42;CL:0000557,3.27e-41,67;CL:0000839,2.46e-37,66;CL:0002009,2.25e-36,61;CL:0000763,1.46e-35,108;CL:0000049,1.46e-35,108;CL:0002194,1.79e-35,59;CL:0000576,1.79e-35,59;CL:0000040,1.79e-35,59;CL:0000559,1.79e-35,59;CL:0000738,7.47e-27,136;CL:0000037,1.91e-23,168;CL:0002032,1.49e-22,161;CL:0000837,1.49e-22,161;CL:0000988,1.63e-22,177;CL:0002031,2.76e-20,120;CL:0002087,5.11e-19,115;CL:0000094,4.00e-10,8;CL:0000134,1.25e-09,354;CL:0002320,3.83e-09,361;CL:0000034,4.95e-09,441;CL:0000048,7.46e-09,427;CL:0000723,1.70e-08,433;CL:0000219,5.80e-08,386;CL:0000775,7.62e-08,3;CL:0000081,4.08e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.17e-30;42!CL:0000049;2.01e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.80e-19!80;UBERON:0002390!2.95e-17!102;UBERON:0003061!2.95e-17!102;UBERON:0001474!8.37e-17!86;UBERON:0002193!1.33e-15!112;UBERON:0004765!1.52e-14!101;UBERON:0001434!1.52e-14!101;UBERON:0002204!1.23e-13!167;UBERON:0002405!4.32e-12!115;UBERON:0002384!3.31e-10!375;UBERON:0003081!1.06e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.89e-10;9!UBERON:0001557;4.89e-10;9 | |||
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| ||
|short_description=p1@BC009749 | |short_description=p1@BC009749 | ||
}} | }} |
Latest revision as of 13:52, 29 July 2015
Short description: | p1@BC009749 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC009749_5end |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | 0bp_to_BC009749_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.80e-47 | 72 |
defensive cell | 4.77e-47 | 48 |
phagocyte | 4.77e-47 | 48 |
classical monocyte | 9.84e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.84e-43 | 42 |
granulocyte monocyte progenitor cell | 3.27e-41 | 67 |
myeloid lineage restricted progenitor cell | 2.46e-37 | 66 |
macrophage dendritic cell progenitor | 2.25e-36 | 61 |
myeloid cell | 1.46e-35 | 108 |
common myeloid progenitor | 1.46e-35 | 108 |
monopoietic cell | 1.79e-35 | 59 |
monocyte | 1.79e-35 | 59 |
monoblast | 1.79e-35 | 59 |
promonocyte | 1.79e-35 | 59 |
leukocyte | 7.47e-27 | 136 |
hematopoietic stem cell | 1.91e-23 | 168 |
hematopoietic oligopotent progenitor cell | 1.49e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-22 | 161 |
hematopoietic cell | 1.63e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 2.76e-20 | 120 |
nongranular leukocyte | 5.11e-19 | 115 |
granulocyte | 4.00e-10 | 8 |
mesenchymal cell | 1.25e-09 | 354 |
connective tissue cell | 3.83e-09 | 361 |
stem cell | 4.95e-09 | 441 |
multi fate stem cell | 7.46e-09 | 427 |
somatic stem cell | 1.70e-08 | 433 |
motile cell | 5.80e-08 | 386 |
neutrophil | 7.62e-08 | 3 |
blood cell | 4.08e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.90e-37 | 76 |
bone element | 2.49e-33 | 82 |
hematopoietic system | 6.69e-31 | 98 |
blood island | 6.69e-31 | 98 |
immune system | 1.58e-29 | 93 |
skeletal element | 2.50e-29 | 90 |
hemolymphoid system | 6.90e-27 | 108 |
skeletal system | 3.10e-25 | 100 |
musculoskeletal system | 4.87e-17 | 167 |
lateral plate mesoderm | 8.71e-16 | 203 |
larynx | 1.39e-09 | 9 |
mesoderm | 4.41e-09 | 315 |
mesoderm-derived structure | 4.41e-09 | 315 |
presumptive mesoderm | 4.41e-09 | 315 |
connective tissue | 1.74e-08 | 371 |