FFCP PHASE1:Hg19::chr14:75079205..75079223,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:75079205..75079223,-
|short_description=p7@LTBP2
|description=CAGE_peak_7_at_LTBP2_5end
|association_with_transcript=82bp_to_ENST00000556359_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4053 | |EntrezGene=4053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |HGNC=6715 | ||
|TSSclassifier=strong | |||
|UniProt=G3V254 | |UniProt=G3V254 | ||
|association_with_transcript=82bp_to_ENST00000556359_5end | |||
|cluster_id=chr14:75079205..75079223,- | |||
|coexpression_cluster_id=C758 | |||
|description=CAGE_peak_7_at_LTBP2_5end | |||
|id=chr14:75079205..75079223,- | |||
|ontology_enrichment_celltype=CL:0000222!1.10e-19!119;CL:0000055!1.11e-19!180;CL:0000220!4.40e-17!246;CL:0002321!1.63e-16!248;CL:0002371!9.95e-15!591;CL:0000057!3.22e-14!75;CL:0000144!2.66e-13!625;CL:0000183!7.84e-13!59;CL:0000115!8.45e-13!35;CL:0000359!1.23e-12!32;CL:0002139!1.91e-12!24;CL:0000680!1.56e-11!57;CL:0000056!1.56e-11!57;CL:0000355!1.56e-11!57;CL:0000192!3.31e-11!42;CL:0000514!3.31e-11!42;CL:0000187!1.50e-10!54;CL:0002078!3.22e-10!44;CL:0000071!4.62e-10!18;CL:0002546!4.62e-10!18;CL:0000213!1.43e-09!57;CL:0000215!1.43e-09!57;CL:0000548!5.48e-09!679;CL:0000004!5.48e-09!679;CL:0000255!5.48e-09!679;CL:0000012!1.64e-08!682;CL:0000393!3.32e-08!60;CL:0000211!3.32e-08!60;CL:1000413!1.27e-07!9;CL:0002334!1.92e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.13e-14;24!CL:0000115;3.09e-13;36!CL:0000071;5.68e-12;18!CL:0000359;2.76e-11;32!CL:1000413;1.39e-09;9!CL:0002334;2.48e-09;12!CL:0002078;2.56e-07;45!CL:0000192;6.00e-07;43!CL:0002544;6.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.07e-15,121;CL:0000115,3.36e-14,36;CL:0002139,4.36e-14,24;CL:0002321,5.32e-14,250;CL:0000057,2.18e-13,76;CL:0000071,5.81e-12,18;CL:0002546,5.81e-12,18;CL:0000359,1.08e-11,32;CL:0002078,3.28e-11,45;CL:1000413,1.54e-09,9;CL:0002334,2.64e-09,12;CL:0000192,1.56e-08,43;CL:0000514,1.56e-08,43;CL:0000213,4.62e-08,58;CL:0000215,4.62e-08,58;CL:0000680,9.55e-08,58;CL:0000056,9.55e-08,58;CL:0000355,9.55e-08,58;CL:0002544,7.21e-07,6;CL:0000187,9.94e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;5.68e-12;18!CL:0000514;6.00e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!2.57e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.23e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.00e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.67e-30!79;UBERON:0007798!2.67e-30!79;UBERON:0000055!4.43e-26!69;UBERON:0001981!4.79e-25!60;UBERON:0007500!4.79e-25!60;UBERON:0004537!4.79e-25!60;UBERON:0006965!4.79e-25!60;UBERON:0004872!1.91e-22!84;UBERON:0004535!1.07e-21!110;UBERON:0001009!1.74e-21!113;UBERON:0001637!1.92e-20!42;UBERON:0003509!1.92e-20!42;UBERON:0004572!1.92e-20!42;UBERON:0003914!5.44e-19!118;UBERON:0004573!1.43e-15!33;UBERON:0004571!1.43e-15!33;UBERON:0000119!1.48e-14!312;UBERON:0000483!4.45e-14!309;UBERON:0000914!7.35e-14!83;UBERON:0002329!7.35e-14!83;UBERON:0003077!7.35e-14!83;UBERON:0003059!7.35e-14!83;UBERON:0007282!7.35e-14!83;UBERON:0009618!7.35e-14!83;UBERON:0007285!7.35e-14!83;UBERON:0000486!7.75e-14!82;UBERON:0000490!7.62e-12!138;UBERON:0000947!2.51e-11!21;UBERON:0010191!2.51e-11!21;UBERON:0000475!3.55e-11!365;UBERON:0000468!6.18e-11!659;UBERON:0005256!6.76e-11!143;UBERON:0004290!8.87e-11!70;UBERON:0000467!1.30e-10!625;UBERON:0000477!1.45e-10!286;UBERON:0000480!1.92e-10!626;UBERON:0003102!3.49e-10!95;UBERON:0001134!3.68e-10!61;UBERON:0002036!3.68e-10!61;UBERON:0003082!3.68e-10!61;UBERON:0002100!3.82e-10!216;UBERON:0002385!4.30e-10!63;UBERON:0001015!4.30e-10!63;UBERON:0000383!4.30e-10!63;UBERON:0001986!4.62e-10!18;UBERON:0004638!4.62e-10!18;UBERON:0004852!4.62e-10!18;UBERON:0004111!1.22e-09!241;UBERON:0001444!9.17e-08!48;UBERON:0003915!1.27e-07!9;UBERON:0004700!1.27e-07!9;UBERON:0001917!1.27e-07!9;UBERON:0000487!1.78e-07!22;UBERON:0006914!2.88e-07!25;UBERON:0005085!5.14e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.97e-19;42!UBERON:0003509;9.97e-19;42!UBERON:0004572;9.97e-19;42!UBERON:0004573;2.64e-17;33!UBERON:0004571;2.64e-17;33!UBERON:0007500;4.73e-14;56!UBERON:0001981;4.73e-14;56!UBERON:0004537;4.73e-14;56!UBERON:0000947;1.28e-13;21!UBERON:0010191;1.28e-13;21!UBERON:0000055;5.11e-13;65!UBERON:0002049;1.83e-12;75!UBERON:0007798;1.83e-12;75!UBERON:0004638;5.68e-12;18!UBERON:0001986;5.68e-12;18!UBERON:0004852;5.68e-12;18!UBERON:0003914;1.37e-11;74!UBERON:0003915;1.39e-09;9!UBERON:0004700;1.39e-09;9!UBERON:0001917;1.39e-09;9!UBERON:0000487;1.07e-08;22!UBERON:0010371;1.94e-08;31!UBERON:0006914;5.44e-08;25!UBERON:0000490;8.76e-08;33!UBERON:0004535;1.84e-07;109!UBERON:0000025;2.16e-07;93!UBERON:0000483;4.09e-07;136!UBERON:0001009;8.72e-07;112!UBERON:0000119;9.15e-07;139 | |||
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| ||
|short_description=p7@LTBP2 | |||
}} | }} |
Latest revision as of 01:26, 16 September 2015
Short description: | p7@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 82bp_to_ENST00000556359_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | G3V254 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.07e-15 | 121 |
endothelial cell | 3.36e-14 | 36 |
endothelial cell of vascular tree | 4.36e-14 | 24 |
embryonic cell | 5.32e-14 | 250 |
fibroblast | 2.18e-13 | 76 |
blood vessel endothelial cell | 5.81e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.81e-12 | 18 |
vascular associated smooth muscle cell | 1.08e-11 | 32 |
meso-epithelial cell | 3.28e-11 | 45 |
endothelial cell of artery | 1.54e-09 | 9 |
preadipocyte | 2.64e-09 | 12 |
smooth muscle cell | 1.56e-08 | 43 |
smooth muscle myoblast | 1.56e-08 | 43 |
lining cell | 4.62e-08 | 58 |
barrier cell | 4.62e-08 | 58 |
muscle precursor cell | 9.55e-08 | 58 |
myoblast | 9.55e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.55e-08 | 58 |
aortic endothelial cell | 7.21e-07 | 6 |
muscle cell | 9.94e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.47e-30 | 78 |
vascular system | 1.47e-30 | 78 |
vessel | 2.58e-27 | 68 |
epithelial tube open at both ends | 4.07e-26 | 59 |
blood vessel | 4.07e-26 | 59 |
blood vasculature | 4.07e-26 | 59 |
vascular cord | 4.07e-26 | 59 |
artery | 1.41e-24 | 42 |
arterial blood vessel | 1.41e-24 | 42 |
arterial system | 1.41e-24 | 42 |
cardiovascular system | 5.69e-23 | 109 |
circulatory system | 2.36e-22 | 112 |
splanchnic layer of lateral plate mesoderm | 2.83e-22 | 83 |
epithelial tube | 2.06e-18 | 117 |
systemic artery | 3.17e-18 | 33 |
systemic arterial system | 3.17e-18 | 33 |
aorta | 1.41e-13 | 21 |
aortic system | 1.41e-13 | 21 |
blood vessel endothelium | 5.81e-12 | 18 |
endothelium | 5.81e-12 | 18 |
cardiovascular system endothelium | 5.81e-12 | 18 |
endothelial tube | 1.54e-09 | 9 |
arterial system endothelium | 1.54e-09 | 9 |
endothelium of artery | 1.54e-09 | 9 |
multilaminar epithelium | 1.02e-08 | 83 |
simple squamous epithelium | 1.09e-08 | 22 |
cell layer | 1.71e-08 | 309 |
epithelium | 2.91e-08 | 306 |
epithelial vesicle | 3.63e-08 | 78 |
squamous epithelium | 5.67e-08 | 25 |
head | 1.05e-07 | 56 |
anatomical conduit | 1.52e-07 | 240 |
surface structure | 1.53e-07 | 99 |
unilaminar epithelium | 6.14e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.00e-09 | 14 |