FFCP PHASE1:Hg19::chr2:9893979..9894004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:9893979..9894004,+ | |||
|description=CAGE_peak_at_chr2:9893979..9894004,+ | |description=CAGE_peak_at_chr2:9893979..9894004,+ | ||
|id=chr2:9893979..9894004,+ | |id=chr2:9893979..9894004,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.01e-09!25;CL:0000827!1.01e-09!25;CL:0000066!4.60e-09!254;CL:0000791!4.91e-08!18;CL:0000789!4.91e-08!18;CL:0002420!4.91e-08!18;CL:0002419!4.91e-08!18;CL:0000790!4.91e-08!18;CL:0000223!3.06e-07!59 | |ontology_enrichment_celltype=CL:0000084!1.01e-09!25;CL:0000827!1.01e-09!25;CL:0000066!4.60e-09!254;CL:0000791!4.91e-08!18;CL:0000789!4.91e-08!18;CL:0002420!4.91e-08!18;CL:0002419!4.91e-08!18;CL:0000790!4.91e-08!18;CL:0000223!3.06e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000895;2.74e-10;1!CL:0002379;2.74e-10;1!CL:0000084;6.87e-09;25!CL:0000791;3.11e-08;18!CL:0000789;3.11e-08;18!CL:0002419;3.11e-08;18!CL:0000625;5.73e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,1.89e-10,1;CL:0000895,1.89e-10,1;CL:0002436,1.89e-10,1;CL:0002427,1.89e-10,1;CL:0002428,1.89e-10,1;CL:0002429,1.89e-10,1;CL:0002433,1.89e-10,1;CL:0002431,1.89e-10,1;CL:0002432,1.89e-10,1;CL:0002379,2.74e-10,1;CL:0000084,5.22e-09,25;CL:0000827,5.22e-09,25;CL:0000791,2.52e-08,18;CL:0000789,2.52e-08,18;CL:0002420,2.52e-08,18;CL:0002419,2.52e-08,18;CL:0000790,2.52e-08,18;CL:0000625,4.85e-08,11;CL:0000838,7.51e-08,52;CL:0000542,1.09e-07,53;CL:0000051,1.09e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002427;2.74e-10;1!CL:0000790;3.11e-08;18 | |||
|ontology_enrichment_disease=DOID:1749!9.49e-21!14;DOID:305!5.04e-12!106;DOID:0050687!1.98e-07!143 | |ontology_enrichment_disease=DOID:1749!9.49e-21!14;DOID:305!5.04e-12!106;DOID:0050687!1.98e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.33e-23;14!DOID:4960;1.19e-10;1!DOID:0070004;1.19e-10;1!DOID:3620;2.74e-10;1!DOID:3565;2.74e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.33e-23,14;DOID:4960,1.30e-10,1;DOID:0070004,1.30e-10,1;DOID:3620,2.74e-10,1;DOID:3565,2.74e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.45e-08!169;UBERON:0000925!9.45e-08!169;UBERON:0006595!9.45e-08!169;UBERON:0000974!1.41e-07!10;UBERON:0001723!2.99e-07!3;UBERON:0001033!2.99e-07!3;UBERON:0010056!2.99e-07!3;UBERON:0001007!3.18e-07!155;UBERON:0001555!3.18e-07!155;UBERON:0007026!3.18e-07!155;UBERON:0000161!6.27e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.19e-10;1!UBERON:0004913;2.74e-10;1!UBERON:0003703;2.74e-10;1!UBERON:0001174;2.74e-10;1!UBERON:0004914;2.74e-10;1!UBERON:0003343;3.70e-10;4!UBERON:0004785;3.70e-10;4!UBERON:0000974;4.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.43e-10,1;UBERON:0004913,3.29e-10,1;UBERON:0003703,3.29e-10,1;UBERON:0001174,3.29e-10,1;UBERON:0004914,3.29e-10,1;UBERON:0003343,4.55e-10,4;UBERON:0004785,4.55e-10,4;UBERON:0000974,9.20e-09,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.616804496998528,0,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,1.53288197440768,0.34362744548263,0,0,0,1.90090408889675,0.150575119077773,0,0,1.4206635122641,2.46338399076314,0.604820229674197,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,3.36942951335251,0,0,0,0,0.569647187174163,0,0,1.29694662238543,0,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.445773537109913,0,0,0,0.307160702099232,0,0,0,1.81284261649436,0,0,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.593042257361244,0.617819694732514,0.104421949505455,0,0,0,0,0.19566461893209,0.728341138602278,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,2.09672001890436,0,0,0.0730893170861856,0,0.872901148395775,0,0.451961481561065,0,0,0,0,0.721429382263803,0,0.19980960958213,0,0,0,0,0,0.707082103850386,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0.496166021811951,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,2.2387947355906,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59441995455846,0,0.917142992608395,1.15525666150338,0,0,0,0,0,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49911733887393,5.8922799739867,6.35210769088245,1.5245859670942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0,0,0,0,0,0.870866991587845,0.342233301085281,0.606168477131288,0.0717222053926763,0.332660356546013,0.732629417498771,0,0,0.269475606319761,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.616804496998528,0,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,1.53288197440768,0.34362744548263,0,0,0,1.90090408889675,0.150575119077773,0,0,1.4206635122641,2.46338399076314,0.604820229674197,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,3.36942951335251,0,0,0,0,0.569647187174163,0,0,1.29694662238543,0,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.445773537109913,0,0,0,0.307160702099232,0,0,0,1.81284261649436,0,0,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.593042257361244,0.617819694732514,0.104421949505455,0,0,0,0,0.19566461893209,0.728341138602278,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,2.09672001890436,0,0,0.0730893170861856,0,0.872901148395775,0,0.451961481561065,0,0,0,0,0.721429382263803,0,0.19980960958213,0,0,0,0,0,0.707082103850386,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0.496166021811951,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,2.2387947355906,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59441995455846,0,0.917142992608395,1.15525666150338,0,0,0,0,0,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49911733887393,5.8922799739867,6.35210769088245,1.5245859670942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0,0,0,0,0,0.870866991587845,0.342233301085281,0.606168477131288,0.0717222053926763,0.332660356546013,0.732629417498771,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr2:9893979..9894004,+ | |short_description=p@chr2:9893979..9894004,+ | ||
}} | }} |
Latest revision as of 13:30, 29 July 2015
Short description: | p@chr2:9893979..9894004, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:9893979..9894004, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 1.89e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.89e-10 | 1 |
mature CD4 single-positive thymocyte | 1.89e-10 | 1 |
resting double-positive thymocyte | 1.89e-10 | 1 |
double-positive blast | 1.89e-10 | 1 |
CD69-positive double-positive thymocyte | 1.89e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.89e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.89e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.89e-10 | 1 |
meningothelial cell | 2.74e-10 | 1 |
T cell | 5.22e-09 | 25 |
pro-T cell | 5.22e-09 | 25 |
mature alpha-beta T cell | 2.52e-08 | 18 |
alpha-beta T cell | 2.52e-08 | 18 |
immature T cell | 2.52e-08 | 18 |
mature T cell | 2.52e-08 | 18 |
immature alpha-beta T cell | 2.52e-08 | 18 |
CD8-positive, alpha-beta T cell | 4.85e-08 | 11 |
lymphoid lineage restricted progenitor cell | 7.51e-08 | 52 |
lymphocyte | 1.09e-07 | 53 |
common lymphoid progenitor | 1.09e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.43e-10 | 1 |
hepatopancreatic ampulla | 3.29e-10 | 1 |
extrahepatic bile duct | 3.29e-10 | 1 |
common bile duct | 3.29e-10 | 1 |
duodenal papilla | 3.29e-10 | 1 |
mucosa of oral region | 4.55e-10 | 4 |
respiratory system mucosa | 4.55e-10 | 4 |
neck | 9.20e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.33e-23 | 14 |
bone marrow cancer | 1.30e-10 | 1 |
myeloma | 1.30e-10 | 1 |
central nervous system cancer | 2.74e-10 | 1 |
meningioma | 2.74e-10 | 1 |