FFCP PHASE1:Hg19::chr2:98703643..98703674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200403 | |EntrezGene=200403 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28385 | |HGNC=28385 | ||
|TSSclassifier=strong | |||
|UniProt=F8WD48,Q502W6 | |UniProt=F8WD48,Q502W6 | ||
|association_with_transcript=0bp_to_ENST00000409460,ENST00000448079,ENST00000448638,ENST00000477737_5end | |association_with_transcript=0bp_to_ENST00000409460,ENST00000448079,ENST00000448638,ENST00000477737_5end | ||
|cluster_id=chr2:98703643..98703674,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_VWA3B_5end | |description=CAGE_peak_1_at_VWA3B_5end | ||
|id=chr2:98703643..98703674,+ | |id=chr2:98703643..98703674,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.63e-16!42;CL:0000860!1.05e-14!45;CL:0002194!5.45e-11!63;CL:0000576!5.45e-11!63;CL:0000040!5.45e-11!63;CL:0000559!5.45e-11!63;CL:0002009!2.04e-10!65;CL:0000766!1.60e-09!76;CL:0000839!3.85e-09!70;CL:0000557!6.56e-09!71;CL:0002087!9.83e-08!119;CL:0000738!2.72e-07!140;CL:0002393!3.17e-07!9;CL:0002397!3.17e-07!9 | |ontology_enrichment_celltype=CL:0002057!2.63e-16!42;CL:0000860!1.05e-14!45;CL:0002194!5.45e-11!63;CL:0000576!5.45e-11!63;CL:0000040!5.45e-11!63;CL:0000559!5.45e-11!63;CL:0002009!2.04e-10!65;CL:0000766!1.60e-09!76;CL:0000839!3.85e-09!70;CL:0000557!6.56e-09!71;CL:0002087!9.83e-08!119;CL:0000738!2.72e-07!140;CL:0002393!3.17e-07!9;CL:0002397!3.17e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.08e-12;33!CL:0002057;2.08e-12;33!CL:0000473;2.34e-08;39!CL:0000234;2.34e-08;39!CL:0000576;6.39e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-09,42;CL:0002057,1.01e-09,42;CL:0000473,2.28e-08,48;CL:0000234,2.28e-08,48 | |||
|ontology_enrichment_development_v019=UBERON:0006222;3.40e-08;1!CL:0002057;1.30e-07;42!UBERON:0009117;3.81e-07;10!UBERON:0005564;3.81e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-07!115;UBERON:0002371!4.10e-07!80 | |ontology_enrichment_uberon=UBERON:0007023!1.24e-07!115;UBERON:0002371!4.10e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;8.04e-16;2!UBERON:0003127;1.25e-15;2!UBERON:0002171;1.06e-08;1!UBERON:0006518;1.06e-08;1!UBERON:0008949;1.06e-08;1!UBERON:0000101;1.06e-08;1!UBERON:0002167;1.06e-08;1!UBERON:0001301;1.98e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,8.04e-16,2;UBERON:0003127,1.35e-15,2;UBERON:0002171,1.10e-08,1;UBERON:0006518,1.10e-08,1;UBERON:0008949,1.10e-08,1;UBERON:0000101,1.10e-08,1;UBERON:0002167,1.10e-08,1;UBERON:0001301,2.29e-08,1 | |||
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| ||
|short_description=p1@VWA3B | |short_description=p1@VWA3B | ||
}} | }} |
Latest revision as of 03:32, 19 September 2015
Short description: | p1@VWA3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VWA3B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000409460, ENST00000448079, ENST00000448638, ENST00000477737_5end |
EntrezGene: | VWA3B |
HGNC: | 28385 |
UniProt: | F8WD48Q502W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.01e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-09 | 42 |
defensive cell | 2.28e-08 | 48 |
phagocyte | 2.28e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
throat | 8.04e-16 | 2 |
open tracheal system trachea | 1.35e-15 | 2 |
lower lobe of right lung | 1.10e-08 | 1 |
right lung lobe | 1.10e-08 | 1 |
lower lobe of lung | 1.10e-08 | 1 |
lobe of lung | 1.10e-08 | 1 |
right lung | 1.10e-08 | 1 |
epididymis | 2.29e-08 | 1 |