FFCP PHASE1:Hg19::chr2:97561300..97561311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51252 | |EntrezGene=51252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28036 | |HGNC=28036 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXR5 | |UniProt=Q8IXR5 | ||
|association_with_transcript=-401bp_to_ENST00000494172,NM_001172667_5end | |association_with_transcript=-401bp_to_ENST00000494172,NM_001172667_5end | ||
|cluster_id=chr2:97561300..97561311,- | |||
|description=CAGE_peak_7_at_FAM178B_5end | |description=CAGE_peak_7_at_FAM178B_5end | ||
|id=chr2:97561300..97561311,- | |id=chr2:97561300..97561311,- | ||
|ontology_enrichment_celltype=CL:0000188!8.57e-09!9;CL:0000082!3.68e-07!19 | |ontology_enrichment_celltype=CL:0000188!8.57e-09!9;CL:0000082!3.68e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002553;3.25e-19;1!CL:0000082;3.62e-09;19!CL:0000188;4.80e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.71e-19,1;CL:0000082,3.62e-09,19;CL:0000188,4.43e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0001041;6.14e-10;30 | |||
|ontology_enrichment_disease=DOID:1324!2.33e-09!15;DOID:0050615!1.05e-08!16;DOID:1325!2.01e-07!7;DOID:3904!2.01e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.89e-11;15!DOID:0050615;8.97e-11;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.89e-11,15;DOID:0050615,8.97e-11,16 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002336;3.25e-19;1!UBERON:0002038;3.25e-19;1!UBERON:0011215;3.25e-19;1!UBERON:0001018;3.25e-19;1!UBERON:0009661;3.25e-19;1!UBERON:0002950;3.25e-19;1!UBERON:0002473;3.25e-19;1!UBERON:0005340;3.25e-19;1!UBERON:0003544;3.25e-19;1!UBERON:0005970;3.25e-19;1!UBERON:0002316;3.25e-19;1!UBERON:0001020;3.25e-19;1!UBERON:0001891;3.25e-19;1!UBERON:0002437;3.25e-19;1!UBERON:0001897;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0010225;2.72e-10;2!UBERON:0004802;3.62e-09;19!UBERON:0000115;3.62e-09;19!UBERON:0002048;5.39e-08;22!UBERON:0004807;5.39e-08;22!UBERON:0000117;5.39e-08;22!UBERON:0000171;5.39e-08;22!UBERON:0000170;5.39e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.88e-19,1;UBERON:0011215,1.88e-19,1;UBERON:0001018,1.88e-19,1;UBERON:0002473,1.88e-19,1;UBERON:0005340,1.88e-19,1;UBERON:0003544,1.88e-19,1;UBERON:0005970,1.88e-19,1;UBERON:0002316,1.88e-19,1;UBERON:0001020,1.88e-19,1;UBERON:0002437,1.88e-19,1;UBERON:0002038,5.62e-19,1;UBERON:0009661,5.62e-19,1;UBERON:0002950,5.62e-19,1;UBERON:0001891,5.62e-19,1;UBERON:0009616,5.62e-19,1;UBERON:0010286,5.62e-19,1;UBERON:0005162,2.07e-10,2;UBERON:0000122,2.07e-10,2;UBERON:0001897,2.72e-10,2;UBERON:0010225,2.72e-10,2;UBERON:0004802,3.62e-09,19;UBERON:0000115,3.62e-09,19;UBERON:0002048,5.39e-08,22;UBERON:0000117,5.39e-08,22;UBERON:0000171,5.39e-08,22;UBERON:0000170,5.39e-08,22;UBERON:0005597,5.39e-08,22;UBERON:0000118,5.39e-08,22 | |||
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| ||
|short_description=p7@FAM178B | |short_description=p7@FAM178B | ||
}} | }} |
Latest revision as of 02:10, 19 September 2015
Short description: | p7@FAM178B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAM178B_5end |
Coexpression cluster: | NA |
Association with transcript: | -401bp_to_ENST00000494172, NM_001172667_5end |
EntrezGene: | FAM178B |
HGNC: | 28036 |
UniProt: | Q8IXR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.71e-19 | 1 |
epithelial cell of lung | 3.62e-09 | 19 |
cell of skeletal muscle | 4.43e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 1.88e-19 | 1 |
central nervous system cell part cluster | 1.88e-19 | 1 |
axon tract | 1.88e-19 | 1 |
intercerebral commissure | 1.88e-19 | 1 |
dorsal telencephalic commissure | 1.88e-19 | 1 |
brain white matter | 1.88e-19 | 1 |
brain commissure | 1.88e-19 | 1 |
white matter | 1.88e-19 | 1 |
nervous system commissure | 1.88e-19 | 1 |
cerebral hemisphere white matter | 1.88e-19 | 1 |
substantia nigra | 5.62e-19 | 1 |
midbrain nucleus | 5.62e-19 | 1 |
regional part of midbrain | 5.62e-19 | 1 |
midbrain | 5.62e-19 | 1 |
presumptive midbrain | 5.62e-19 | 1 |
midbrain neural tube | 5.62e-19 | 1 |
multi cell component structure | 2.07e-10 | 2 |
neuron projection bundle | 2.07e-10 | 2 |
dorsal plus ventral thalamus | 2.72e-10 | 2 |
thalamic complex | 2.72e-10 | 2 |
respiratory tract epithelium | 3.62e-09 | 19 |
lung epithelium | 3.62e-09 | 19 |
lung | 5.39e-08 | 22 |
respiratory tube | 5.39e-08 | 22 |
respiration organ | 5.39e-08 | 22 |
pair of lungs | 5.39e-08 | 22 |
lung primordium | 5.39e-08 | 22 |
lung bud | 5.39e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.89e-11 | 15 |
respiratory system cancer | 8.97e-11 | 16 |