FFCP PHASE1:Hg19::chr2:97535773..97535843,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54910 | |EntrezGene=54910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10731 | |HGNC=10731 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0C4 | |UniProt=Q9C0C4 | ||
|association_with_transcript=-38bp_to_NM_017789,uc002sxh.3_5end | |association_with_transcript=-38bp_to_NM_017789,uc002sxh.3_5end | ||
|cluster_id=chr2:97535773..97535843,- | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_1_at_SEMA4C_5end | |description=CAGE_peak_1_at_SEMA4C_5end | ||
|id=chr2:97535773..97535843,- | |id=chr2:97535773..97535843,- | ||
|ontology_enrichment_celltype=CL:0000148!2.65e-07!10;CL:0000541!2.65e-07!10 | |ontology_enrichment_celltype=CL:0000148!2.65e-07!10;CL:0000541!2.65e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.91e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.41e-07,10;CL:0000541,2.41e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.49e-08;82 | |||
|ontology_enrichment_disease=DOID:3095!1.13e-07!22;DOID:2994!1.13e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.42e-08;22!DOID:2994;9.42e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.02e-07,22;DOID:2994,1.02e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.32e-31!115;UBERON:0000073!9.16e-23!94;UBERON:0001016!9.16e-23!94;UBERON:0001017!1.65e-22!82;UBERON:0005743!4.14e-22!86;UBERON:0001049!7.08e-21!57;UBERON:0005068!7.08e-21!57;UBERON:0006241!7.08e-21!57;UBERON:0007135!7.08e-21!57;UBERON:0002346!1.78e-18!90;UBERON:0003075!2.43e-18!86;UBERON:0007284!2.43e-18!86;UBERON:0000955!4.91e-18!69;UBERON:0006238!4.91e-18!69;UBERON:0002616!8.15e-18!59;UBERON:0000924!1.38e-17!173;UBERON:0006601!1.38e-17!173;UBERON:0004121!2.84e-17!169;UBERON:0002780!1.34e-15!41;UBERON:0001890!1.34e-15!41;UBERON:0006240!1.34e-15!41;UBERON:0003080!1.77e-15!42;UBERON:0001893!1.03e-14!34;UBERON:0002020!1.82e-14!34;UBERON:0003528!1.82e-14!34;UBERON:0002791!3.77e-14!33;UBERON:0001869!1.77e-13!32;UBERON:0000033!9.09e-12!123;UBERON:0000153!1.30e-11!129;UBERON:0007811!1.30e-11!129;UBERON:0003056!1.55e-11!61;UBERON:0002619!8.59e-11!22;UBERON:0000956!1.15e-10!25;UBERON:0000203!1.15e-10!25;UBERON:0001950!3.51e-10!20;UBERON:0000025!3.52e-10!194;UBERON:0000064!6.12e-10!219;UBERON:0004111!7.59e-10!241;UBERON:0000481!1.59e-08!347;UBERON:0000475!2.91e-08!365;UBERON:0000477!4.64e-08!286;UBERON:0000483!5.35e-08!309;UBERON:0000119!1.09e-07!312;UBERON:0005177!1.31e-07!107 | |ontology_enrichment_uberon=UBERON:0007023!5.32e-31!115;UBERON:0000073!9.16e-23!94;UBERON:0001016!9.16e-23!94;UBERON:0001017!1.65e-22!82;UBERON:0005743!4.14e-22!86;UBERON:0001049!7.08e-21!57;UBERON:0005068!7.08e-21!57;UBERON:0006241!7.08e-21!57;UBERON:0007135!7.08e-21!57;UBERON:0002346!1.78e-18!90;UBERON:0003075!2.43e-18!86;UBERON:0007284!2.43e-18!86;UBERON:0000955!4.91e-18!69;UBERON:0006238!4.91e-18!69;UBERON:0002616!8.15e-18!59;UBERON:0000924!1.38e-17!173;UBERON:0006601!1.38e-17!173;UBERON:0004121!2.84e-17!169;UBERON:0002780!1.34e-15!41;UBERON:0001890!1.34e-15!41;UBERON:0006240!1.34e-15!41;UBERON:0003080!1.77e-15!42;UBERON:0001893!1.03e-14!34;UBERON:0002020!1.82e-14!34;UBERON:0003528!1.82e-14!34;UBERON:0002791!3.77e-14!33;UBERON:0001869!1.77e-13!32;UBERON:0000033!9.09e-12!123;UBERON:0000153!1.30e-11!129;UBERON:0007811!1.30e-11!129;UBERON:0003056!1.55e-11!61;UBERON:0002619!8.59e-11!22;UBERON:0000956!1.15e-10!25;UBERON:0000203!1.15e-10!25;UBERON:0001950!3.51e-10!20;UBERON:0000025!3.52e-10!194;UBERON:0000064!6.12e-10!219;UBERON:0004111!7.59e-10!241;UBERON:0000481!1.59e-08!347;UBERON:0000475!2.91e-08!365;UBERON:0000477!4.64e-08!286;UBERON:0000483!5.35e-08!309;UBERON:0000119!1.09e-07!312;UBERON:0005177!1.31e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.34e-12;34!UBERON:0003528;2.18e-12;34!UBERON:0002020;2.18e-12;34!UBERON:0002791;3.09e-12;32!UBERON:0001869;3.49e-12;32!UBERON:0002780;1.67e-11;41!UBERON:0001890;1.67e-11;41!UBERON:0000073;2.33e-11;53!UBERON:0002616;2.33e-11;53!UBERON:0002619;7.32e-11;22!UBERON:0000956;1.23e-10;25!UBERON:0000203;1.23e-10;25!UBERON:0001950;3.13e-10;20!UBERON:0000955;1.01e-08;68!UBERON:0000922;1.42e-08;49!UBERON:0001017;1.65e-08;75!UBERON:0001016;1.90e-08;83!UBERON:0007023;2.74e-08;114 | |||
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| ||
|short_description=p1@SEMA4C | |short_description=p1@SEMA4C | ||
}} | }} |
Latest revision as of 02:01, 19 September 2015
Short description: | p1@SEMA4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEMA4C_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -38bp_to_NM_017789, uc002sxh.3_5end |
EntrezGene: | SEMA4C |
HGNC: | 10731 |
UniProt: | Q9C0C4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.41e-07 | 10 |
melanoblast | 2.41e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.02e-07 | 22 |
germ cell cancer | 1.02e-07 | 22 |