FFCP PHASE1:Hg19::chr14:73603140..73603255,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:73603140..73603255,+
|short_description=p1@PSEN1
|description=CAGE_peak_1_at_PSEN1_5end
|association_with_transcript=0bp_to_ENST00000261970,ENST0000032450...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5663 | |EntrezGene=5663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9508 | |HGNC=9508 | ||
|TSSclassifier=strong | |||
|UniProt=P49768,G3V2Y9,G3V519,G3V499,G3V4P4,G3V2G7,G3V490,G3V449,G3V2B1,G3V3P0,G3V4M0 | |UniProt=P49768,G3V2Y9,G3V519,G3V499,G3V4P4,G3V2G7,G3V490,G3V449,G3V2B1,G3V3P0,G3V4M0 | ||
|association_with_transcript=0bp_to_ENST00000261970,ENST00000324501,ENST00000344094,ENST00000357710,ENST00000394157,ENST00000553447,ENST00000553599,ENST00000553719,ENST00000554131,ENST00000555254,ENST00000556011,ENST00000556533,ENST00000556864,ENST00000556951,ENST00000557037,ENST00000557293,ENST00000559361,ENST00000560005,NM_000021,NM_007318,uc001xnq.3,uc001xnr.2,uc001xnv.2_5end | |||
|cluster_id=chr14:73603140..73603255,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_PSEN1_5end | |||
|id=chr14:73603140..73603255,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.97e-37!76;CL:0002009!8.43e-33!65;CL:0000557!1.91e-32!71;CL:0002194!9.58e-32!63;CL:0000576!9.58e-32!63;CL:0000040!9.58e-32!63;CL:0000559!9.58e-32!63;CL:0000839!7.46e-31!70;CL:0002057!3.14e-27!42;CL:0000860!2.51e-26!45;CL:0000763!7.31e-24!112;CL:0000049!7.31e-24!112;CL:0000738!4.17e-22!140;CL:0002031!5.53e-17!124;CL:0002087!2.28e-16!119;CL:0000037!6.30e-15!172;CL:0000566!6.30e-15!172;CL:0002032!1.55e-14!165;CL:0000837!1.55e-14!165;CL:0000988!9.40e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.75e-20;33!CL:0002057;2.75e-20;33!CL:0000473;1.78e-19;39!CL:0000234;1.78e-19;39!CL:0000576;5.18e-19;48!CL:0000766;1.75e-16;69!CL:0000763;1.97e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.55e-38,72;CL:0002009,5.71e-34,61;CL:0000557,1.88e-33,67;CL:0002194,6.45e-33,59;CL:0000576,6.45e-33,59;CL:0000040,6.45e-33,59;CL:0000559,6.45e-33,59;CL:0000839,8.18e-32,66;CL:0000473,3.58e-30,48;CL:0000234,3.58e-30,48;CL:0000860,3.14e-27,42;CL:0002057,3.14e-27,42;CL:0000763,4.01e-24,108;CL:0000049,4.01e-24,108;CL:0000738,3.25e-22,136;CL:0002031,4.60e-17,120;CL:0002087,1.87e-16,115;CL:0000037,6.89e-15,168;CL:0002032,1.67e-14,161;CL:0000837,1.67e-14,161;CL:0000988,4.14e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.83e-20;42!CL:0000049;1.00e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.84e-29!102;UBERON:0003061!2.84e-29!102;UBERON:0002371!2.43e-28!80;UBERON:0002193!3.92e-26!112;UBERON:0001474!1.96e-25!86;UBERON:0004765!5.55e-23!101;UBERON:0001434!5.55e-23!101;UBERON:0002405!1.24e-16!115;UBERON:0007023!1.57e-16!115;UBERON:0001049!5.02e-13!57;UBERON:0005068!5.02e-13!57;UBERON:0006241!5.02e-13!57;UBERON:0007135!5.02e-13!57;UBERON:0002616!1.17e-11!59;UBERON:0002780!1.56e-11!41;UBERON:0001890!1.56e-11!41;UBERON:0006240!1.56e-11!41;UBERON:0001017!3.32e-11!82;UBERON:0003080!3.88e-11!42;UBERON:0001893!1.42e-10!34;UBERON:0002020!1.53e-10!34;UBERON:0003528!1.53e-10!34;UBERON:0005743!1.82e-10!86;UBERON:0000955!3.27e-10!69;UBERON:0006238!3.27e-10!69;UBERON:0002791!3.94e-10!33;UBERON:0001869!1.56e-09!32;UBERON:0002204!9.64e-09!167;UBERON:0000073!1.26e-08!94;UBERON:0001016!1.26e-08!94;UBERON:0000062!4.04e-08!511;UBERON:0002619!9.07e-08!22;UBERON:0003075!1.01e-07!86;UBERON:0007284!1.01e-07!86;UBERON:0002346!4.82e-07!90;UBERON:0001950!5.43e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.29e-09;34!UBERON:0003528;8.97e-09;34!UBERON:0002020;8.97e-09;34!UBERON:0002780;9.48e-09;41!UBERON:0001890;9.48e-09;41!UBERON:0002791;1.61e-08;32!UBERON:0001869;1.91e-08;32!UBERON:0002619;1.05e-07;22!UBERON:0000073;1.42e-07;53!UBERON:0002616;1.42e-07;53!UBERON:0001950;6.34e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.79e-30,98;UBERON:0003061,9.79e-30,98;UBERON:0002371,5.03e-29,76;UBERON:0002193,1.92e-26,108;UBERON:0004765,2.83e-26,90;UBERON:0001474,6.08e-26,82;UBERON:0002405,6.42e-24,93;UBERON:0001434,3.34e-23,100;UBERON:0007023,3.93e-16,114;UBERON:0001049,2.21e-13,56;UBERON:0005068,2.21e-13,56;UBERON:0006241,2.21e-13,56;UBERON:0007135,2.21e-13,56;UBERON:0000073,4.24e-12,53;UBERON:0002616,4.24e-12,53;UBERON:0002780,1.56e-11,41;UBERON:0001890,1.56e-11,41;UBERON:0003080,1.56e-11,41;UBERON:0006240,1.56e-11,41;UBERON:0001017,1.93e-11,81;UBERON:0001893,1.42e-10,34;UBERON:0003528,1.53e-10,34;UBERON:0002020,1.53e-10,34;UBERON:0000955,1.85e-10,68;UBERON:0006238,1.85e-10,68;UBERON:0002791,1.32e-09,32;UBERON:0001869,1.56e-09,32;UBERON:0001016,2.18e-09,89;UBERON:0002204,7.27e-09,167;UBERON:0002619,9.07e-08,22;UBERON:0003075,1.42e-07,82;UBERON:0007284,1.42e-07,82;UBERON:0002050,1.81e-07,564;UBERON:0001950,5.43e-07,20;UBERON:0000923,5.55e-07,560;UBERON:0010316,5.55e-07,560;UBERON:0005291,5.55e-07,560;UBERON:0006598,5.55e-07,560;UBERON:0010317,5.55e-07,560;UBERON:0002532,5.55e-07,560;UBERON:0002346,6.95e-07,86 | |||
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|short_description=p1@PSEN1 | |||
}} | }} |
Latest revision as of 22:53, 15 September 2015
Short description: | p1@PSEN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSEN1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000261970, ENST00000324501, ENST00000344094, ENST00000357710, ENST00000394157, ENST00000553447, ENST00000553599, ENST00000553719, ENST00000554131, ENST00000555254, ENST00000556011, ENST00000556533, ENST00000556864, ENST00000556951, ENST00000557037, ENST00000557293, ENST00000559361, ENST00000560005, NM_000021, NM_007318, uc001xnq.3, uc001xnr.2, uc001xnv.2_5end |
EntrezGene: | PSEN1 |
HGNC: | 9508 |
UniProt: | P49768G3V2Y9G3V519G3V499G3V4P4G3V2G7G3V490G3V449G3V2B1G3V3P0G3V4M0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.55e-38 | 72 |
macrophage dendritic cell progenitor | 5.71e-34 | 61 |
granulocyte monocyte progenitor cell | 1.88e-33 | 67 |
monopoietic cell | 6.45e-33 | 59 |
monocyte | 6.45e-33 | 59 |
monoblast | 6.45e-33 | 59 |
promonocyte | 6.45e-33 | 59 |
myeloid lineage restricted progenitor cell | 8.18e-32 | 66 |
defensive cell | 3.58e-30 | 48 |
phagocyte | 3.58e-30 | 48 |
classical monocyte | 3.14e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-27 | 42 |
myeloid cell | 4.01e-24 | 108 |
common myeloid progenitor | 4.01e-24 | 108 |
leukocyte | 3.25e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 4.60e-17 | 120 |
nongranular leukocyte | 1.87e-16 | 115 |
hematopoietic stem cell | 6.89e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.67e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-14 | 161 |
hematopoietic cell | 4.14e-12 | 177 |