FFCP PHASE1:Hg19::chrX:102471235..102471248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56271 | |EntrezGene=56271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25475 | |HGNC=25475 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=153bp_to_BC148484,BC156670_5end | |association_with_transcript=153bp_to_BC148484,BC156670_5end | ||
|cluster_id=chrX:102471235..102471248,+ | |||
|description=CAGE_peak_3_at_BEX4_5end | |description=CAGE_peak_3_at_BEX4_5end | ||
|id=chrX:102471235..102471248,+ | |id=chrX:102471235..102471248,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002174;8.61e-11;1!CL:0000501;8.61e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,4.15e-11,1;CL:0000501,4.15e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006222;8.61e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.58e-15!34;UBERON:0003528!2.58e-15!34;UBERON:0001893!1.13e-14!34;UBERON:0002791!2.38e-14!33;UBERON:0001869!9.98e-14!32;UBERON:0001049!1.72e-13!57;UBERON:0005068!1.72e-13!57;UBERON:0006241!1.72e-13!57;UBERON:0007135!1.72e-13!57;UBERON:0002780!1.53e-12!41;UBERON:0001890!1.53e-12!41;UBERON:0006240!1.53e-12!41;UBERON:0003080!5.55e-12!42;UBERON:0002346!1.62e-11!90;UBERON:0002616!1.75e-11!59;UBERON:0000073!1.05e-10!94;UBERON:0001016!1.05e-10!94;UBERON:0000956!1.24e-10!25;UBERON:0000203!1.24e-10!25;UBERON:0003075!1.25e-10!86;UBERON:0007284!1.25e-10!86;UBERON:0005743!1.45e-10!86;UBERON:0003056!2.10e-10!61;UBERON:0002619!3.06e-10!22;UBERON:0001017!6.07e-10!82;UBERON:0001950!3.24e-09!20;UBERON:0000955!3.35e-09!69;UBERON:0006238!3.35e-09!69;UBERON:0007023!8.28e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;8.61e-11;1!UBERON:0000349;1.20e-08;5!UBERON:0002791;2.28e-07;32!UBERON:0002619;6.44e-07;22!UBERON:0001869;7.44e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,7.46e-11,1;UBERON:0001017,5.27e-10,81;UBERON:0001049,1.01e-09,56;UBERON:0005068,1.01e-09,56;UBERON:0006241,1.01e-09,56;UBERON:0007135,1.01e-09,56;UBERON:0001016,7.00e-09,89;UBERON:0000349,1.43e-08,5;UBERON:0003075,4.81e-08,82;UBERON:0007284,4.81e-08,82;UBERON:0000073,5.71e-08,53;UBERON:0002616,5.71e-08,53;UBERON:0002780,8.19e-08,41;UBERON:0001890,8.19e-08,41;UBERON:0003080,8.19e-08,41;UBERON:0006240,8.19e-08,41;UBERON:0000955,1.01e-07,68;UBERON:0006238,1.01e-07,68;UBERON:0002346,1.28e-07,86;UBERON:0010371,1.42e-07,104;UBERON:0002791,3.73e-07,32;UBERON:0001869,3.73e-07,32;UBERON:0002619,6.65e-07,22;UBERON:0003056,7.51e-07,61;UBERON:0003528,9.79e-07,34;UBERON:0002020,9.79e-07,34;UBERON:0001893,9.79e-07,34 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0.994192127183747,0,0,0,0,0.492484232307152,0,0,0.286235987131057,0.547497700291537,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0.28769239232215,0.512321413058201,0,0,0,0,0,0.545812300115692,0,0,0.641858054152187,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0,0,1.70763890732835,0,0.382273228125229,0,0,0,0,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0,0,0,0.506039384039006,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0.802320587350522,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.43917392846563,0.0654895377488563,0,0,0.324547393654683,1.0447784237956,0.531831842075461,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.487894824518382,0.132529768321485,0.69716365721711,0.829288440122964,0,1.09493207722749,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0.246217006087397,0,0.594524649154913,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0,0,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0.602878754119172,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0,0,0,0,0.821905290201534,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0.335032530668698,0.637938751653163,0,2.99161459204025,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0.521301686808497,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0.131124414959424,0,0.308061348417659,0,1.46139224653261,0.105551628892876,0,0.340187410553031,0.431831832204279,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.107420244868274,0.290033387828457,0.170453254832202,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0.307160702099232,0,1.1253553312841,0.556543525114529,0,0.211125408127993,0,0,0,0,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,1.11321717794222,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.844175070377856,0,0.442317039724898,1.18219047581419,0,0,0.139423744278603,0.153900517007594,0,0,0.0897576444097721,0.217294743844016,0.31900115973192,0,0.533034776018635,0,0,0.332423363800313,0.225595660617181,0,0.167821586975843,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0.134802265961354,0,1.63985112007737,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.547621515567972,0,1.71906176567983,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,2.38568906942791,0.136203406111576,0.160753148465019,0.137539436597234,3.32352270423348,0.2249738915515,0,0.182248669974074,0,0.157611414598396,0,0.211200673038813,0,0,0.714695326373367,0,0,0,0,0,1.19730191562487,0.410462603746695,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,6.9554970994119,0.250381861413,0,0.332787154610557,0.248385611765534,0.276697269872462,0,0.151649117541648,0,0.705797459094515,0.468334905806882,0.144921028610825,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.477890301491107,0,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.27651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| ||
|short_description=p3@BEX4 | |short_description=p3@BEX4 | ||
}} | }} |
Latest revision as of 19:21, 18 September 2015
Short description: | p3@BEX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BEX4_5end |
Coexpression cluster: | NA |
Association with transcript: | 153bp_to_BC148484, BC156670_5end |
EntrezGene: | BEX4 |
HGNC: | 25475 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 4.15e-11 | 1 |
granulosa cell | 4.15e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
putamen | 7.46e-11 | 1 |
central nervous system | 5.27e-10 | 81 |
neural tube | 1.01e-09 | 56 |
neural rod | 1.01e-09 | 56 |
future spinal cord | 1.01e-09 | 56 |
neural keel | 1.01e-09 | 56 |
nervous system | 7.00e-09 | 89 |
limbic system | 1.43e-08 | 5 |
neural plate | 4.81e-08 | 82 |
presumptive neural plate | 4.81e-08 | 82 |
regional part of nervous system | 5.71e-08 | 53 |
regional part of brain | 5.71e-08 | 53 |
regional part of forebrain | 8.19e-08 | 41 |
forebrain | 8.19e-08 | 41 |
anterior neural tube | 8.19e-08 | 41 |
future forebrain | 8.19e-08 | 41 |
brain | 1.01e-07 | 68 |
future brain | 1.01e-07 | 68 |
neurectoderm | 1.28e-07 | 86 |
ecto-epithelium | 1.42e-07 | 104 |
regional part of telencephalon | 3.73e-07 | 32 |
cerebral hemisphere | 3.73e-07 | 32 |
regional part of cerebral cortex | 6.65e-07 | 22 |
pre-chordal neural plate | 7.51e-07 | 61 |
brain grey matter | 9.79e-07 | 34 |
gray matter | 9.79e-07 | 34 |
telencephalon | 9.79e-07 | 34 |