FFCP PHASE1:Hg19::chr2:81710247..81710252,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:81710247..81710252,+ | |||
|coexpression_cluster_id=C4246 | |||
|description=CAGE_peak_at_chr2:81710247..81710252,+ | |description=CAGE_peak_at_chr2:81710247..81710252,+ | ||
|id=chr2:81710247..81710252,+ | |id=chr2:81710247..81710252,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;7.45e-16;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,8.04e-16,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.78e-25!235;DOID:0050687!1.61e-24!143;DOID:14566!2.27e-24!239;DOID:305!2.03e-20!106;DOID:1749!2.13e-13!14 | |ontology_enrichment_disease=DOID:162!2.78e-25!235;DOID:0050687!1.61e-24!143;DOID:14566!2.27e-24!239;DOID:305!2.03e-20!106;DOID:1749!2.13e-13!14 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.34e-15;2!DOID:0060085;2.20e-08;1!DOID:3165;2.20e-08;1!DOID:3151;2.20e-08;1!DOID:0060121;2.20e-08;1!DOID:2438;2.20e-08;1!DOID:4418;2.20e-08;1!DOID:3149;2.20e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.47e-16,235;DOID:14566,9.30e-16,239;DOID:1909,1.67e-15,2;DOID:0050687,7.97e-13,143;DOID:3151,1.27e-08,1;DOID:3149,1.27e-08,1;DOID:0060085,1.37e-08,1;DOID:3165,1.37e-08,1;DOID:0060121,1.37e-08,1;DOID:2438,1.37e-08,1;DOID:4418,1.37e-08,1;DOID:305,1.35e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.40e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;7.12e-11;3!UBERON:0002294;5.96e-10;7!UBERON:0001173;5.96e-10;7!UBERON:0001282;2.20e-08;1!UBERON:0009842;2.20e-08;1!UBERON:0003704;2.20e-08;1!UBERON:0001171;2.20e-08;1!UBERON:0001172;2.20e-08;1!UBERON:0000014;5.61e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,7.49e-11,3;UBERON:0006242,7.49e-11,3;UBERON:0001282,1.48e-08,1;UBERON:0009842,1.48e-08,1;UBERON:0003704,1.48e-08,1;UBERON:0001171,1.48e-08,1;UBERON:0001172,1.48e-08,1;UBERON:0000014,3.41e-08,4;UBERON:0002294,6.91e-08,9;UBERON:0001173,6.91e-08,9;UBERON:0004912,6.91e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.661763836394364,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0,0,0,1.11362469558097,0,0,0,0,0,0,1.09224469574562,2.22886768554957,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75794698593172,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,0.269272933229316,1.3037684630641,0,0,0,0,0,0,0.225595660617181,0,0.503464760927528,1.3282761290693,0,1.26598838716816,0,0,3.02944095638928,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0,0,0,0,1.58971689362392,0,2.73771935828724,2.00397050628834,0,0.999048047910651,0,0.687219576995494,0,0,0,0,0,0,0,1.44475294950759,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0.0674035438541849,0.688992370603241,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,2.05231301873347,0,0.679872549120754,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0.395223263795889,0,1.27668251554036,0,0,0,0,0.942324577501406,0,0.122026264901963,0,0,0,0,0,0.37494122388632,1.21319294033318,3.14011866899464,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.655219697692825,0.491545817507439,0,0,0,0.861074898304078,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41664733254615,0.825788063434183,0,0.115525666150338,0.381382095467167,0,0,0,1.41193548092464,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,1.27865567904938,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0,0,0,2.41869136839944,0.905777061400041,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.71421575442263,0.705789743431384,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0.50141507858475,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,1.28072815053259,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.661763836394364,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0,0,0,1.11362469558097,0,0,0,0,0,0,1.09224469574562,2.22886768554957,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75794698593172,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,0.269272933229316,1.3037684630641,0,0,0,0,0,0,0.225595660617181,0,0.503464760927528,1.3282761290693,0,1.26598838716816,0,0,3.02944095638928,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0,0,0,0,1.58971689362392,0,2.73771935828724,2.00397050628834,0,0.999048047910651,0,0.687219576995494,0,0,0,0,0,0,0,1.44475294950759,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0.0674035438541849,0.688992370603241,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,2.05231301873347,0,0.679872549120754,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0.395223263795889,0,1.27668251554036,0,0,0,0,0.942324577501406,0,0.122026264901963,0,0,0,0,0,0.37494122388632,1.21319294033318,3.14011866899464,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.655219697692825,0.491545817507439,0,0,0,0.861074898304078,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41664733254615,0.825788063434183,0,0.115525666150338,0.381382095467167,0,0,0,1.41193548092464,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,1.27865567904938,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0,0,0,2.41869136839944,0.905777061400041,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.71421575442263,0.705789743431384,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0.50141507858475,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,1.28072815053259,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:81710247..81710252,+ | |short_description=p@chr2:81710247..81710252,+ | ||
}} | }} |
Latest revision as of 12:33, 29 July 2015
Short description: | p@chr2:81710247..81710252, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:81710247..81710252, + |
Coexpression cluster: | C4246_colon_melanoma_cholangiocellular_gall_maxillary_chronic_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 8.04e-16 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 7.49e-11 | 3 |
gall bladder primordium | 7.49e-11 | 3 |
intralobular bile duct | 1.48e-08 | 1 |
acinus | 1.48e-08 | 1 |
intrahepatic bile duct | 1.48e-08 | 1 |
portal lobule | 1.48e-08 | 1 |
hepatic acinus | 1.48e-08 | 1 |
zone of skin | 3.41e-08 | 4 |
biliary system | 6.91e-08 | 9 |
biliary tree | 6.91e-08 | 9 |
biliary bud | 6.91e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.47e-16 | 235 |
disease of cellular proliferation | 9.30e-16 | 239 |
melanoma | 1.67e-15 | 2 |
cell type cancer | 7.97e-13 | 143 |
skin squamous cell carcinoma | 1.27e-08 | 1 |
keratoacanthoma | 1.27e-08 | 1 |
organ system benign neoplasm | 1.37e-08 | 1 |
skin benign neoplasm | 1.37e-08 | 1 |
integumentary system benign neoplasm | 1.37e-08 | 1 |
dermis tumor | 1.37e-08 | 1 |
cutaneous fibrous histiocytoma | 1.37e-08 | 1 |
carcinoma | 1.35e-07 | 106 |