FFCP PHASE1:Hg19::chr14:69444976..69445013,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:69444976..69445013,-
|short_description=p6@ACTN1
|description=CAGE_peak_6_at_ACTN1_5end
|association_with_transcript=0bp_to_ENST00000553659,ENST0000055561...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=87 | |EntrezGene=87 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=163 | |HGNC=163 | ||
|TSSclassifier=strong | |||
|UniProt=G3V380,G3V2W4 | |UniProt=G3V380,G3V2W4 | ||
|association_with_transcript=0bp_to_ENST00000553659,ENST00000555616,uc010ttd.1_5end | |||
|cluster_id=chr14:69444976..69445013,- | |||
|description=CAGE_peak_6_at_ACTN1_5end | |||
|id=chr14:69444976..69445013,- | |||
|ontology_enrichment_celltype=CL:0000183!1.03e-08!59;CL:0000187!1.58e-08!54;CL:0000055!1.62e-08!180;CL:0000680!1.86e-08!57;CL:0000056!1.86e-08!57;CL:0000355!1.86e-08!57;CL:0000393!9.72e-08!60;CL:0000211!9.72e-08!60;CL:0000192!7.80e-07!42;CL:0000514!7.80e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000192;4.97e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.84e-10,43;CL:0000514,1.84e-10,43;CL:0000187,1.23e-09,55;CL:0000680,9.04e-09,58;CL:0000056,9.04e-09,58;CL:0000355,9.04e-09,58;CL:0000393,5.32e-08,61;CL:0000211,5.32e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;4.97e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!8.46e-07!63;UBERON:0001015!8.46e-07!63;UBERON:0000383!8.46e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,3.41e-08,64;UBERON:0001015,3.41e-08,64;UBERON:0000383,3.41e-08,64;UBERON:0001134,9.20e-08,62;UBERON:0002036,9.20e-08,62;UBERON:0003082,9.20e-08,62;UBERON:0007524,6.36e-07,73 | |||
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| ||
|short_description=p6@ACTN1 | |||
}} | }} |
Latest revision as of 07:29, 25 September 2015
Short description: | p6@ACTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ACTN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000553659, ENST00000555616, uc010ttd.1_5end |
EntrezGene: | ACTN1 |
HGNC: | 163 |
UniProt: | G3V380G3V2W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.84e-10 | 43 |
smooth muscle myoblast | 1.84e-10 | 43 |
muscle cell | 1.23e-09 | 55 |
muscle precursor cell | 9.04e-09 | 58 |
myoblast | 9.04e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.04e-09 | 58 |
electrically responsive cell | 5.32e-08 | 61 |
electrically active cell | 5.32e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 3.41e-08 | 64 |
musculature | 3.41e-08 | 64 |
musculature of body | 3.41e-08 | 64 |
skeletal muscle tissue | 9.20e-08 | 62 |
striated muscle tissue | 9.20e-08 | 62 |
myotome | 9.20e-08 | 62 |
dense mesenchyme tissue | 6.36e-07 | 73 |