FFCP PHASE1:Hg19::chr9:95709782..95709794,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89846 | |EntrezGene=89846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16027 | |HGNC=16027 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSP0 | |UniProt=Q5JSP0 | ||
|association_with_transcript=49bp_to_ENST00000375482_5end | |association_with_transcript=49bp_to_ENST00000375482_5end | ||
|cluster_id=chr9:95709782..95709794,+ | |||
|description=CAGE_peak_5_at_FGD3_5end | |description=CAGE_peak_5_at_FGD3_5end | ||
|id=chr9:95709782..95709794,+ | |id=chr9:95709782..95709794,+ | ||
|ontology_enrichment_celltype=CL:0000791!8.04e-23!18;CL:0000789!8.04e-23!18;CL:0002420!8.04e-23!18;CL:0002419!8.04e-23!18;CL:0000790!8.04e-23!18;CL:0000625!2.75e-16!11;CL:0000084!1.10e-14!25;CL:0000827!1.10e-14!25;CL:0000624!7.02e-10!6;CL:0000838!2.30e-07!52;CL:0000542!4.13e-07!53;CL:0000051!4.13e-07!53 | |ontology_enrichment_celltype=CL:0000791!8.04e-23!18;CL:0000789!8.04e-23!18;CL:0002420!8.04e-23!18;CL:0002419!8.04e-23!18;CL:0000790!8.04e-23!18;CL:0000625!2.75e-16!11;CL:0000084!1.10e-14!25;CL:0000827!1.10e-14!25;CL:0000624!7.02e-10!6;CL:0000838!2.30e-07!52;CL:0000542!4.13e-07!53;CL:0000051!4.13e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.59e-60;18!CL:0000789;3.59e-60;18!CL:0002419;3.59e-60;18!CL:0000084;4.16e-42;25!CL:0000625;3.91e-41;11!CL:0000624;2.54e-24;6!CL:0000898;2.64e-13;3!CL:0000542;1.69e-10;53!CL:0000815;1.94e-09;2!CL:0000792;1.94e-09;2!CL:0002677;1.94e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.30e-60,18;CL:0000789,1.30e-60,18;CL:0002420,1.30e-60,18;CL:0002419,1.30e-60,18;CL:0000790,1.30e-60,18;CL:0000084,2.02e-42,25;CL:0000827,2.02e-42,25;CL:0000625,9.97e-42,11;CL:0000624,3.45e-24,6;CL:0000838,2.07e-20,52;CL:0000542,6.12e-20,53;CL:0000051,6.12e-20,53;CL:0000898,2.82e-13,3;CL:0000815,2.11e-09,2;CL:0000792,2.11e-09,2;CL:0002677,2.11e-09,2;CL:0002087,8.42e-09,115;CL:0000738,9.09e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.59e-60;18!CL:0000051;1.69e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.88e-10!15;UBERON:0000179!4.88e-10!15;UBERON:0000463!4.88e-10!15;UBERON:0007023!1.44e-08!115;UBERON:0000365!5.80e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.40e-15;15!UBERON:0000179;5.40e-15;15!UBERON:0000463;5.40e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.93e-15,15;UBERON:0000179,3.93e-15,15;UBERON:0000463,3.93e-15,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,1.10926203050036,0,0,0,0,0.200544447470142,0.651032612147555,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,2.16380747125216,3.14408610199332,3.08402248499264,0.501559486172034,5.21475626613745,2.8406868344084,7.79306913631645,1.6711568532776,5.30290633454707,4.2091439970888,2.43723477388514,0.768547918354051,1.30059347559878,0.986627427622057,1.38175008892924,1.44901542867526,6.52460877913066,5.61835738988397,2.09071047609954,1.47302145506836,5.3650869104269,1.37450978193052,2.02415753615602,2.86708872891687,1.95325036156926,3.8018081777935,3.46322773878877,2.55973222308837,7.49584359314075,3.07810427657222,2.46338399076314,3.22570789159572,1.87208137048455,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.862510299438069,1.28343036279748,0,1.30139853857622,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,0.647142602455851,2.02782359826544,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.188287601553558,0.86101074534246,1.68471475667626,0.443430153536676,0.918893600827838,1.52234282769651,1.52927441428475,0.569647187174163,1.66762242820452,0.822724546172388,3.24236655596359,2.70015718619057,1.58625035258854,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0.227586896570999,0.254253650292766,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0.538651809526579,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,0,1.20990716048664,1.83643656978294,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0.77380195455795,0.0607495566580247,0.335434687599266,0,0.104909176269996,0,0.179287339332845,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.558867626472451,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,1.26035848110859,0.0691572524642179,0,0,0.490738592505128,0.353909170043221,0.366857197043358,0,0,0,0.596748666348824,0,0,0,0,0,0.591424344868181,0,0,0,0,3.28184885410932,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0.135939465953663,0.197318320688547,0,0.111231401892069,0.39246546425257,0.314231179832004,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0.3414369541879,0,1.72090943528111,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0.102662806856247,1.1598144313382,0,6.08242605001475,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,1.30905207102113,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0.740872583160463,0.0717222053926763,0.332660356546013,0.488419611665847,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 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| ||
|short_description=p5@FGD3 | |short_description=p5@FGD3 | ||
}} | }} |
Latest revision as of 07:53, 18 September 2015
Short description: | p5@FGD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FGD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000375482_5end |
EntrezGene: | FGD3 |
HGNC: | 16027 |
UniProt: | Q5JSP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.30e-60 | 18 |
alpha-beta T cell | 1.30e-60 | 18 |
immature T cell | 1.30e-60 | 18 |
mature T cell | 1.30e-60 | 18 |
immature alpha-beta T cell | 1.30e-60 | 18 |
T cell | 2.02e-42 | 25 |
pro-T cell | 2.02e-42 | 25 |
CD8-positive, alpha-beta T cell | 9.97e-42 | 11 |
CD4-positive, alpha-beta T cell | 3.45e-24 | 6 |
lymphoid lineage restricted progenitor cell | 2.07e-20 | 52 |
lymphocyte | 6.12e-20 | 53 |
common lymphoid progenitor | 6.12e-20 | 53 |
naive T cell | 2.82e-13 | 3 |
regulatory T cell | 2.11e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.11e-09 | 2 |
naive regulatory T cell | 2.11e-09 | 2 |
nongranular leukocyte | 8.42e-09 | 115 |
leukocyte | 9.09e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 3.93e-15 | 15 |
haemolymphatic fluid | 3.93e-15 | 15 |
organism substance | 3.93e-15 | 15 |