FFCP PHASE1:Hg19::chr14:68375236..68375240,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:68375236..68375240,+
|short_description=p9@RAD51B
|description=CAGE_peak_9_at_RAD51B_5end
|association_with_transcript=214bp_to_ENST00000468382_5end
|Ent...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5890 | |EntrezGene=5890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9822 | |HGNC=9822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=214bp_to_ENST00000468382_5end | |||
|cluster_id=chr14:68375236..68375240,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_9_at_RAD51B_5end | |||
|id=chr14:68375236..68375240,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;7.14e-26;4!UBERON:0007284;7.14e-26;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.55e-98;1!UBERON:0005208;2.55e-98;1!UBERON:0004145;2.55e-98;1!UBERON:0005946;2.55e-98;1!UBERON:0005965;2.55e-98;1!UBERON:0002078;2.55e-98;1!UBERON:0002081;4.52e-50;2!UBERON:0002133;4.52e-50;2!UBERON:0003978;5.96e-34;3!UBERON:0004151;5.96e-34;3!UBERON:0000946;5.96e-34;3!UBERON:0010313;3.02e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.55e-98,1;UBERON:0005208,2.55e-98,1;UBERON:0005946,2.55e-98,1;UBERON:0005965,2.55e-98,1;UBERON:0002078,2.55e-98,1;UBERON:0002081,4.52e-50,2;UBERON:0002133,4.52e-50,2;UBERON:0010227,4.52e-50,2;UBERON:0003978,5.96e-34,3;UBERON:0009751,5.96e-34,3;UBERON:0004151,5.96e-34,3;UBERON:0000946,5.96e-34,3;UBERON:0002523,5.96e-34,3;UBERON:0005983,5.96e-34,3;UBERON:0004145,5.96e-34,3;UBERON:0002165,5.96e-34,3;UBERON:0002062,5.96e-34,3;UBERON:0007280,5.96e-34,3;UBERON:0004797,1.91e-15,7;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0005062,3.02e-11,10 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426507697462265,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.862510299438069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.355709216742071,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,7.17826387635178,0.19924798825107,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0.274083849293502,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,1.43574604915363,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0.795229689809303,0,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0.567515953566836,0,0,0,0.255788742607303,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426507697462265,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.862510299438069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.355709216742071,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,7.17826387635178,0.19924798825107,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0.274083849293502,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,1.43574604915363,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0.795229689809303,0,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0.567515953566836,0,0,0,0.255788742607303,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | ||
|short_description=p9@RAD51B | |||
}} | }} |
Latest revision as of 05:44, 25 September 2015
Short description: | p9@RAD51B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RAD51B_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 214bp_to_ENST00000468382_5end |
EntrezGene: | RAD51B |
HGNC: | 9822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.55e-98 | 1 |
right atrium valve | 2.55e-98 | 1 |
outflow tract of atrium | 2.55e-98 | 1 |
outflow part of right atrium | 2.55e-98 | 1 |
right cardiac atrium | 2.55e-98 | 1 |
cardiac atrium | 4.52e-50 | 2 |
atrioventricular valve | 4.52e-50 | 2 |
future cardiac atrium | 4.52e-50 | 2 |
valve | 5.96e-34 | 3 |
cardiac mesenchyme | 5.96e-34 | 3 |
cardiac chamber | 5.96e-34 | 3 |
cardial valve | 5.96e-34 | 3 |
tunica intima | 5.96e-34 | 3 |
heart layer | 5.96e-34 | 3 |
outflow tract | 5.96e-34 | 3 |
endocardium | 5.96e-34 | 3 |
endocardial cushion | 5.96e-34 | 3 |
presumptive endocardium | 5.96e-34 | 3 |
blood vessel layer | 1.91e-15 | 7 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |