FFCP PHASE1:Hg19::chr2:63815597..63815625,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51057 | |EntrezGene=51057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28027 | |HGNC=28027 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000484073_5end | |association_with_transcript=8bp_to_ENST00000484073_5end | ||
|cluster_id=chr2:63815597..63815625,- | |||
|description=CAGE_peak_2_at_WDPCP_5end | |description=CAGE_peak_2_at_WDPCP_5end | ||
|id=chr2:63815597..63815625,- | |id=chr2:63815597..63815625,- | ||
|ontology_enrichment_celltype=CL:0000791!1.81e-07!18;CL:0000789!1.81e-07!18;CL:0002420!1.81e-07!18;CL:0002419!1.81e-07!18;CL:0000790!1.81e-07!18;CL:0000838!2.38e-07!52;CL:0000542!3.98e-07!53;CL:0000051!3.98e-07!53 | |ontology_enrichment_celltype=CL:0000791!1.81e-07!18;CL:0000789!1.81e-07!18;CL:0002420!1.81e-07!18;CL:0002419!1.81e-07!18;CL:0000790!1.81e-07!18;CL:0000838!2.38e-07!52;CL:0000542!3.98e-07!53;CL:0000051!3.98e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.23e-07;18!CL:0000789;1.23e-07;18!CL:0002419;1.23e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.51e-08,18;CL:0000789,5.51e-08,18;CL:0002420,5.51e-08,18;CL:0002419,5.51e-08,18;CL:0000790,5.51e-08,18;CL:0000838,3.90e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;1.23e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.55e-19!115;UBERON:0001049!8.52e-15!57;UBERON:0005068!8.52e-15!57;UBERON:0006241!8.52e-15!57;UBERON:0007135!8.52e-15!57;UBERON:0002780!3.04e-14!41;UBERON:0001890!3.04e-14!41;UBERON:0006240!3.04e-14!41;UBERON:0002616!4.90e-14!59;UBERON:0000955!1.26e-13!69;UBERON:0006238!1.26e-13!69;UBERON:0003080!3.48e-13!42;UBERON:0001893!2.70e-12!34;UBERON:0001869!4.63e-12!32;UBERON:0002020!4.68e-12!34;UBERON:0003528!4.68e-12!34;UBERON:0001017!6.48e-12!82;UBERON:0002791!8.20e-12!33;UBERON:0005743!2.08e-11!86;UBERON:0000073!3.67e-11!94;UBERON:0001016!3.67e-11!94;UBERON:0002346!3.10e-10!90;UBERON:0003075!1.13e-09!86;UBERON:0007284!1.13e-09!86;UBERON:0000956!7.98e-09!25;UBERON:0000203!7.98e-09!25;UBERON:0001950!1.57e-08!20;UBERON:0002619!2.42e-08!22;UBERON:0003056!2.35e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!3.55e-19!115;UBERON:0001049!8.52e-15!57;UBERON:0005068!8.52e-15!57;UBERON:0006241!8.52e-15!57;UBERON:0007135!8.52e-15!57;UBERON:0002780!3.04e-14!41;UBERON:0001890!3.04e-14!41;UBERON:0006240!3.04e-14!41;UBERON:0002616!4.90e-14!59;UBERON:0000955!1.26e-13!69;UBERON:0006238!1.26e-13!69;UBERON:0003080!3.48e-13!42;UBERON:0001893!2.70e-12!34;UBERON:0001869!4.63e-12!32;UBERON:0002020!4.68e-12!34;UBERON:0003528!4.68e-12!34;UBERON:0001017!6.48e-12!82;UBERON:0002791!8.20e-12!33;UBERON:0005743!2.08e-11!86;UBERON:0000073!3.67e-11!94;UBERON:0001016!3.67e-11!94;UBERON:0002346!3.10e-10!90;UBERON:0003075!1.13e-09!86;UBERON:0007284!1.13e-09!86;UBERON:0000956!7.98e-09!25;UBERON:0000203!7.98e-09!25;UBERON:0001950!1.57e-08!20;UBERON:0002619!2.42e-08!22;UBERON:0003056!2.35e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.49e-10;34!UBERON:0001869;2.82e-10;32!UBERON:0002780;3.21e-10;41!UBERON:0001890;3.21e-10;41!UBERON:0002791;5.99e-10;32!UBERON:0003528;6.07e-10;34!UBERON:0002020;6.07e-10;34!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0001950;3.43e-08;20!UBERON:0000956;6.17e-08;25!UBERON:0000203;6.17e-08;25!UBERON:0002619;1.01e-07;22!UBERON:0001017;6.69e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.88e-18,114;UBERON:0001049,4.27e-16,56;UBERON:0005068,4.27e-16,56;UBERON:0006241,4.27e-16,56;UBERON:0007135,4.27e-16,56;UBERON:0000073,3.90e-15,53;UBERON:0002616,3.90e-15,53;UBERON:0002780,2.08e-14,41;UBERON:0001890,2.08e-14,41;UBERON:0003080,2.08e-14,41;UBERON:0006240,2.08e-14,41;UBERON:0000955,2.36e-14,68;UBERON:0006238,2.36e-14,68;UBERON:0001017,4.75e-13,81;UBERON:0001016,9.52e-13,89;UBERON:0001893,2.73e-12,34;UBERON:0003528,4.85e-12,34;UBERON:0002020,4.85e-12,34;UBERON:0001869,5.08e-12,32;UBERON:0002346,7.67e-12,86;UBERON:0002791,1.97e-11,32;UBERON:0003075,3.21e-11,82;UBERON:0007284,3.21e-11,82;UBERON:0003056,1.38e-08,61;UBERON:0000956,1.44e-08,25;UBERON:0000203,1.44e-08,25;UBERON:0001950,2.09e-08,20;UBERON:0002619,5.05e-08,22;UBERON:0010314,2.08e-07,132;UBERON:0010371,4.50e-07,104 | |||
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| ||
|short_description=p2@WDPCP | |short_description=p2@WDPCP | ||
}} | }} |
Latest revision as of 22:29, 17 September 2015
Short description: | p2@WDPCP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WDPCP_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000484073_5end |
EntrezGene: | WDPCP |
HGNC: | 28027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.51e-08 | 18 |
alpha-beta T cell | 5.51e-08 | 18 |
immature T cell | 5.51e-08 | 18 |
mature T cell | 5.51e-08 | 18 |
immature alpha-beta T cell | 5.51e-08 | 18 |
lymphoid lineage restricted progenitor cell | 3.90e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.88e-18 | 114 |
neural tube | 4.27e-16 | 56 |
neural rod | 4.27e-16 | 56 |
future spinal cord | 4.27e-16 | 56 |
neural keel | 4.27e-16 | 56 |
regional part of nervous system | 3.90e-15 | 53 |
regional part of brain | 3.90e-15 | 53 |
regional part of forebrain | 2.08e-14 | 41 |
forebrain | 2.08e-14 | 41 |
anterior neural tube | 2.08e-14 | 41 |
future forebrain | 2.08e-14 | 41 |
brain | 2.36e-14 | 68 |
future brain | 2.36e-14 | 68 |
central nervous system | 4.75e-13 | 81 |
nervous system | 9.52e-13 | 89 |
telencephalon | 2.73e-12 | 34 |
brain grey matter | 4.85e-12 | 34 |
gray matter | 4.85e-12 | 34 |
cerebral hemisphere | 5.08e-12 | 32 |
neurectoderm | 7.67e-12 | 86 |
regional part of telencephalon | 1.97e-11 | 32 |
neural plate | 3.21e-11 | 82 |
presumptive neural plate | 3.21e-11 | 82 |
pre-chordal neural plate | 1.38e-08 | 61 |
cerebral cortex | 1.44e-08 | 25 |
pallium | 1.44e-08 | 25 |
neocortex | 2.09e-08 | 20 |
regional part of cerebral cortex | 5.05e-08 | 22 |
structure with developmental contribution from neural crest | 2.08e-07 | 132 |
ecto-epithelium | 4.50e-07 | 104 |