FFCP PHASE1:Hg19::chr9:35684538..35684558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:35684538..35684558,- | |||
|coexpression_cluster_id=C638 | |||
|description=CAGE_peak_at_chr9:35684538..35684558,- | |description=CAGE_peak_at_chr9:35684538..35684558,- | ||
|id=chr9:35684538..35684558,- | |id=chr9:35684538..35684558,- | ||
|ontology_enrichment_celltype=CL:0000055!5.84e-16!180;CL:0000680!2.01e-10!57;CL:0000056!2.01e-10!57;CL:0000355!2.01e-10!57;CL:0000183!3.65e-09!59;CL:0000057!3.90e-09!75;CL:0000187!4.36e-09!54;CL:0000359!5.86e-09!32;CL:0000192!6.87e-09!42;CL:0000514!6.87e-09!42;CL:0000393!6.78e-08!60;CL:0000211!6.78e-08!60 | |ontology_enrichment_celltype=CL:0000055!5.84e-16!180;CL:0000680!2.01e-10!57;CL:0000056!2.01e-10!57;CL:0000355!2.01e-10!57;CL:0000183!3.65e-09!59;CL:0000057!3.90e-09!75;CL:0000187!4.36e-09!54;CL:0000359!5.86e-09!32;CL:0000192!6.87e-09!42;CL:0000514!6.87e-09!42;CL:0000393!6.78e-08!60;CL:0000211!6.78e-08!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.54e-08;3!DOID:127;2.54e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.41e-08,3;DOID:127,2.41e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.78e-14!83;UBERON:0002329!4.78e-14!83;UBERON:0003077!4.78e-14!83;UBERON:0003059!4.78e-14!83;UBERON:0007282!4.78e-14!83;UBERON:0009618!4.78e-14!83;UBERON:0007285!4.78e-14!83;UBERON:0004290!7.55e-14!70;UBERON:0002385!1.01e-13!63;UBERON:0001015!1.01e-13!63;UBERON:0000383!1.01e-13!63;UBERON:0001134!6.24e-13!61;UBERON:0002036!6.24e-13!61;UBERON:0003082!6.24e-13!61;UBERON:0000486!2.52e-09!82;UBERON:0005256!4.24e-09!143;UBERON:0001637!4.65e-09!42;UBERON:0003509!4.65e-09!42;UBERON:0004572!4.65e-09!42;UBERON:0004573!1.53e-08!33;UBERON:0004571!1.53e-08!33;UBERON:0003104!3.61e-08!238;UBERON:0009142!3.61e-08!238;UBERON:0000481!7.73e-08!347;UBERON:0002100!1.81e-07!216;UBERON:0001981!7.37e-07!60;UBERON:0007500!7.37e-07!60;UBERON:0004537!7.37e-07!60;UBERON:0006965!7.37e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.08e-09;31!UBERON:0001015;2.08e-09;31!UBERON:0000383;2.08e-09;31!UBERON:0006947;3.17e-07;3!UBERON:0004054;3.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.12e-10,73;UBERON:0002385,3.92e-10,64;UBERON:0001015,3.92e-10,64;UBERON:0000383,3.92e-10,64;UBERON:0002329,1.08e-09,71;UBERON:0003059,1.08e-09,71;UBERON:0007282,1.08e-09,71;UBERON:0004290,1.08e-09,71;UBERON:0009618,1.08e-09,71;UBERON:0003077,1.77e-09,72;UBERON:0007285,1.77e-09,72;UBERON:0001134,1.86e-09,62;UBERON:0002036,1.86e-09,62;UBERON:0003082,1.86e-09,62;UBERON:0005256,2.72e-09,122;UBERON:0007503,2.54e-08,78;UBERON:0000486,1.70e-07,83;UBERON:0006947,2.68e-07,3;UBERON:0004054,2.68e-07,3;UBERON:0003104,5.43e-07,160;UBERON:0009142,5.43e-07,160 | |||
|phase1_expression=0.726713517082227,5.78071414505655,1.55049844505568,1.0007329835313,0.893922188854576,0.872338524100369,5.06599756336621,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0.123766352960047,0,3.36162573225888,1.80808358407193,3.65155045193687,2.43966399395253,0,0,0.626909442956176,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.30361867064741,0,0.486634870302636,0.283604451492204,1.55210578223795,0.263504357079378,0.0654895377488563,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,2.43042584364528,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0.573673241497627,0.354668382198357,1.12135520028461,0,1.72667283892012,0,0.134710672069688,0.163461903113459,0,1.15235184896,0,0.312160076830321,0.570471821544449,0.597794722207204,0,0,0.140450806702248,0.204154171254893,0.859840221182376,0.103325781175765,1.18800285728205,3.95627086845691,0,0,0,1.00094815897571,0,0.877955241761676,6.12975591598039,1.65261864797256,0.453728732640084,0.179389635688862,0,0.423863802319124,0,0.103052529238439,0.515281080091258,0.37223371266318,0.168776332241266,0.194874010322397,0.252433774244115,0.736399189138395,0,0,0.403008392910561,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0.36497735907583,3.12899064659632,3.85944562915731,0,0.928735856063958,0.721879481669586,0.473227200159376,0.337169380156203,0.723033089650446,0.661763836394364,0.653638332277218,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.904902010304444,0,1.690605505112,0,0,0,0,0.532844358032199,0.57191197463259,0.542621605391443,0.823240336780769,0,0,0,0.904318131178758,0,1.3996218765488,0,0,0,0.718874566474748,0,0,0.723906533337896,1.84928690295345,0.895304816199478,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,4.15941723061614,5.70972764150918,2.05013139544115,2.45996971484698,0,18.1926003244788,0,0.664225598535437,0.184369168541703,0.434418072340414,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0.920771839728375,4.77122160536225,0.640695746278505,0.511707249066704,1.44768529029247,0,1.3878872442239,0.887808626565635,0.246381468041427,1.03850885836724,1.04589340613963,0,0.601519410909855,0,0.803701137152247,3.45973219212762,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.206082023295445,0.27470839445503,0.165018999841176,0,1.30012049207304,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0.322260734604821,2.46528379654188,0.596586391912706,2.1367688555217,0,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0.6970372701606,0.308033580176089,0.532306030317022,0,0.37064843820784,3.2918723950658,0,0,0.571890581771475,0.511795582622668,0,0.318203247925937,0.78494864019923,0,1.64722217841633,0.706874414074119,0.808729926293264,3.17020642346017,0.421258456238981,0,0.974853958525138,3.16950440270266,0,3.39373036688911,0,0,2.65375590096488,4.38450885253763,0,0,0.811641507850816,1.54911749049875,0.281695602532241,0,0.491245205065606,0.35667105148125,1.41904425628239,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0.445234820091624,0,0,2.98871982376605,1.10513566212459,0,0,0,2.48831670129446,0,0,0,1.87422470710174,0,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,1.52581736317083,0,0,0.438770794307945,0,0,0.461701551022782,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0,0,10.4335094148843,0,0,0,0,1.57833761139756,0,0,0.126373159256976,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,2.09672001890436,0,0.387025325156341,0.365446585430928,0.0821154570532092,0.678923115418936,0,0.677942222341597,0.137041924646751,0,0,0,0,1.70762395791482,0.599428828746391,0,0,0,0.14405479798815,0.124252535565433,0,0.135904206073614,0,0.305994652908965,0,0,0,0,0,0,0,2.29160424011684,0,0.798716001995964,1.28767814440971,0,0.403100834920358,1.44119953416961,0,0.0787831823072236,0,0,0,0,0.795229689809303,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.157611414598396,0,0.105600336519406,0,0.191915197319445,1.42939065274673,0.662091970365432,0.25426853765475,6.51599522104455,13.8275438592203,5.87857248196936,0,0,0.511164065356265,0.339936274560377,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr9:35684538..35684558,- | |short_description=p@chr9:35684538..35684558,- | ||
}} | }} |
Latest revision as of 01:47, 1 August 2015
Short description: | p@chr9:35684538..35684558, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:35684538..35684558, - |
Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.12e-10 | 73 |
muscle tissue | 3.92e-10 | 64 |
musculature | 3.92e-10 | 64 |
musculature of body | 3.92e-10 | 64 |
somite | 1.08e-09 | 71 |
presomitic mesoderm | 1.08e-09 | 71 |
presumptive segmental plate | 1.08e-09 | 71 |
dermomyotome | 1.08e-09 | 71 |
trunk paraxial mesoderm | 1.08e-09 | 71 |
paraxial mesoderm | 1.77e-09 | 72 |
presumptive paraxial mesoderm | 1.77e-09 | 72 |
skeletal muscle tissue | 1.86e-09 | 62 |
striated muscle tissue | 1.86e-09 | 62 |
myotome | 1.86e-09 | 62 |
trunk mesenchyme | 2.72e-09 | 122 |
epithelial vesicle | 2.54e-08 | 78 |
multilaminar epithelium | 1.70e-07 | 83 |
male genital duct | 2.68e-07 | 3 |
internal male genitalia | 2.68e-07 | 3 |
mesenchyme | 5.43e-07 | 160 |
entire embryonic mesenchyme | 5.43e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.41e-08 | 3 |
leiomyoma | 2.41e-08 | 3 |