FFCP PHASE1:Hg19::chr14:62193465..62193490,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:62193465..62193490,+
|short_description=p7@HIF1A
|description=CAGE_peak_7_at_HIF1A_5end
|association_with_transcript=326bp_to_ENST00000556237_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3091 | |EntrezGene=3091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4910 | |HGNC=4910 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=326bp_to_ENST00000556237_5end | |||
|cluster_id=chr14:62193465..62193490,+ | |||
|coexpression_cluster_id=C832 | |||
|description=CAGE_peak_7_at_HIF1A_5end | |||
|id=chr14:62193465..62193490,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.21e-15!42;CL:0000860!4.03e-15!45;CL:0000766!3.51e-13!76;CL:0000048!5.78e-12!430;CL:0002194!3.91e-11!63;CL:0000576!3.91e-11!63;CL:0000040!3.91e-11!63;CL:0000559!3.91e-11!63;CL:0000548!5.30e-11!679;CL:0000004!5.30e-11!679;CL:0000255!5.30e-11!679;CL:0000723!7.97e-11!436;CL:0000012!8.32e-11!682;CL:0000034!1.26e-10!444;CL:0000557!2.56e-10!71;CL:0002009!3.03e-10!65;CL:0000839!8.42e-10!70;CL:0000144!3.75e-09!625;CL:0002320!1.18e-08!365;CL:0002371!2.07e-08!591;CL:0000134!4.56e-08!358;CL:0000003!7.39e-08!722;CL:0000063!8.46e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.65e-20;33!CL:0002057;8.65e-20;33!CL:0000473;4.41e-15;39!CL:0000234;4.41e-15;39!CL:0000576;7.09e-11;48!CL:0000766;1.30e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-20,42;CL:0002057,1.35e-20,42;CL:0000473,1.75e-19,48;CL:0000234,1.75e-19,48;CL:0000048,8.44e-18,427;CL:0000766,2.39e-17,72;CL:0000723,6.48e-17,433;CL:0000034,2.64e-16,441;CL:0002194,5.60e-15,59;CL:0000576,5.60e-15,59;CL:0000040,5.60e-15,59;CL:0000559,5.60e-15,59;CL:0002009,4.53e-14,61;CL:0002320,1.10e-13,361;CL:0000557,1.51e-13,67;CL:0000839,3.74e-13,66;CL:0000134,1.03e-12,354;CL:0000219,8.80e-10,386;CL:0000763,2.05e-07,108;CL:0000049,2.05e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.90e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.34e-11!167;UBERON:0002371!5.62e-10!80;UBERON:0004765!6.53e-09!101;UBERON:0001434!6.53e-09!101;UBERON:0002384!6.69e-09!375;UBERON:0001474!1.00e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.51e-15,167;UBERON:0002384,3.99e-14,371;UBERON:0002371,1.13e-13,76;UBERON:0004765,1.20e-13,90;UBERON:0001474,1.79e-12,82;UBERON:0001434,5.33e-12,100;UBERON:0002405,1.99e-10,93;UBERON:0000926,7.28e-10,315;UBERON:0004120,7.28e-10,315;UBERON:0006603,7.28e-10,315;UBERON:0002390,6.12e-09,98;UBERON:0003061,6.12e-09,98;UBERON:0002193,2.39e-08,108 | |||
|phase1_expression=1.45342703416445,2.99740733447376,3.94672331468719,1.0007329835313,2.23480547213644,2.61701557230111,2.53299878168311,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,2.22779435328084,1.65698687863958,2.01697543935533,1.80808358407193,2.19093027116212,0.975865597581014,0.246242116153576,0,0,0,0.547497700291537,0.376627918784408,0.305653622991805,0.328402357799783,0.550975469195755,1.18009283054671,0.767658796194425,0,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0,2.21598163412751,5.01361118675354,3.03815219002193,0,0.647787332037959,0.515151135268373,1.16318591023652,0.755751887377619,0.242584061187816,2.32429036905685,2.87817521615278,2.16794459626573,2.8769239232215,2.0492856522328,3.78371567821736,5.86067657252252,4.51839278508678,1.35426486594342,4.32957380947991,2.18324920046277,2.69668181334102,4.28517449319264,5.1348644332175,7.67204550958849,1.31940520074686,4.3882004676759,3.40979800426155,7.2552309657146,1.13477044938228,1.24564449799115,4.01997864410789,4.17186334736161,1.52032191293582,6.65939452896706,1.47311054395026,3.79754864929061,1.47878700418359,0.425208599930087,0.838634582033504,0.673971786878971,1.50176892841506,1.12507910687956,0.285012743741249,0.99458338599545,0,0,0,0,0.426730222566507,0,0,0,0,2.27685187643779,2.34894875748376,0.764546456250458,0,1.68152568894461,0,0.393419540227666,1.96505381374582,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0.589211814949674,0,0,0,0.130059347559878,0.657751618414705,0.552700035571697,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.453237370790265,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0,0.383959833463255,0,0,0,0.403213486449465,0.534880391567015,1.15859523106239,2.43806866313962,3.35350429851818,1.2786256184353,1.0843174571537,1.50401373190767,2.17269778441236,0.795285947051099,1.45990461090791,1.22895262313288,1.77383517970051,2.19586964232815,0,0,0.370784442784429,0.324547393654683,0.348259474598534,1.32957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0.516833518338658,1.42306505074684,1.33888245105868,0.805658634218294,0.760272105718513,0,0,0,0.357198913136319,0.44905874525234,0.563057402416611,0,0,0.366403487860815,5.27121669744253,7.75560528296651,0.436094052142534,1.98788780678127,0.379891534993739,0.794455084879313,3.15520282823695,1.41867352879343,2.80338800071154,0,0.49333509683432,1.24484414159907,1.48181739276657,1.47115712802113,0.151357427644931,1.72852777344,0.234321431833797,1.87296046098192,0,1.19558944441441,0.704606991862589,0.485618833104395,0.421352420106746,0.816616685019573,0.491337269247072,0.309977343527296,1.18800285728205,1.48360157567134,0,0.718618141816238,0.336672227908132,0.625592599359821,0,0.438977620880838,1.22595118319608,0.901428353439581,1.13432183160021,2.15267562826634,0.85422955527427,3.39091041855299,1.80054657650641,1.13357782162283,2.06112432036503,0.930584281657949,1.0126579934476,1.16924406193438,2.01947019395292,0.920498986422993,0,1.42003837006646,0.705264687593482,0.847802961552438,0.57978255948989,0.545492241181669,0,0.609868530647977,0.530119073285941,0.580969714347592,0.207322110030741,0.252320850875628,1.45990943630332,0,1.28648187638577,0,1.39310378409594,0,1.30137480043828,1.01150814046861,1.44606617930089,1.65440959098591,1.52515610864684,1.66089433377768,1.21348177344148,1.37355025587742,1.15424147083917,0,0,0,0,0,2.94848165003288,0.590789906681404,0.441463099414651,0,1.71567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,2.88662684050547,0.695582429850461,1.52631302506568,0.288732895522148,0.462985512576611,1.14152491340759,0.790204397959275,0.858486162094873,0.246217006087397,0.468008530278475,0.743155811443641,0.93733833986777,1.00789276919316,0.708875486211932,0.626909658919938,0.581267877027924,0.766765358330422,4.92663237895944,0.264145302039678,0.621984346622316,0.144119953416961,0.37872730027914,0.126995788584338,0.381988425558278,1.17217447210047,0,0.514137463516618,1.20137223137567,0.571652865261156,0.224262168690721,0.43596006883328,1.24675085895615,0.387815147273333,0,2.535908257668,1.32969058292435,0,0.257207374262142,0,0.799266537048298,3.43147184779554,0,0.823240336780769,0.977208552881205,2.13235169245527,2.37585561880029,0.904318131178758,0.871533458600294,1.19967589418468,0,3.51579964002488,6.32501818449095,0.718874566474748,1.14861935834114,0,2.60606352001643,2.05476322550383,1.79060963239896,0.336255431980582,0,0.215627574859517,0.77005821767849,0.76228387266739,0,0,0.167516265334349,0,9.73709131131337,41.8826042885635,4.14415513436035,0.613457458595699,2.00068208423871,1.35632511849868,2.9115920614313,2.3195768543631,2.36553622550902,0.819989904948992,0,0,0,1.99267679560631,0.553107505625109,0,0.195801157462741,0,0.413536052245775,2.15714200818617,0.640365346820666,0.303127571446259,0,0.604780586659361,4.21783273291921,1.8415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| ||
|short_description=p7@HIF1A | |||
}} | }} |
Latest revision as of 23:27, 24 September 2015
Short description: | p7@HIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HIF1A_5end |
Coexpression cluster: | C832_Neutrophils_CD14_Preadipocyte_Olfactory_tenocyte_mixed_Adipocyte |
Association with transcript: | 326bp_to_ENST00000556237_5end |
EntrezGene: | HIF1A |
HGNC: | 4910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.35e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-20 | 42 |
defensive cell | 1.75e-19 | 48 |
phagocyte | 1.75e-19 | 48 |
multi fate stem cell | 8.44e-18 | 427 |
myeloid leukocyte | 2.39e-17 | 72 |
somatic stem cell | 6.48e-17 | 433 |
stem cell | 2.64e-16 | 441 |
monopoietic cell | 5.60e-15 | 59 |
monocyte | 5.60e-15 | 59 |
monoblast | 5.60e-15 | 59 |
promonocyte | 5.60e-15 | 59 |
macrophage dendritic cell progenitor | 4.53e-14 | 61 |
connective tissue cell | 1.10e-13 | 361 |
granulocyte monocyte progenitor cell | 1.51e-13 | 67 |
myeloid lineage restricted progenitor cell | 3.74e-13 | 66 |
mesenchymal cell | 1.03e-12 | 354 |
motile cell | 8.80e-10 | 386 |
myeloid cell | 2.05e-07 | 108 |
common myeloid progenitor | 2.05e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.51e-15 | 167 |
connective tissue | 3.99e-14 | 371 |
bone marrow | 1.13e-13 | 76 |
skeletal element | 1.20e-13 | 90 |
bone element | 1.79e-12 | 82 |
skeletal system | 5.33e-12 | 100 |
immune system | 1.99e-10 | 93 |
mesoderm | 7.28e-10 | 315 |
mesoderm-derived structure | 7.28e-10 | 315 |
presumptive mesoderm | 7.28e-10 | 315 |
hematopoietic system | 6.12e-09 | 98 |
blood island | 6.12e-09 | 98 |
hemolymphoid system | 2.39e-08 | 108 |