FFCP PHASE1:Hg19::chr9:140353799..140353811,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26012 | |EntrezGene=26012 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29843 | |HGNC=29843 | ||
|TSSclassifier=strong | |||
|UniProt=Q2TB96,Q6X4W1,F5H603 | |UniProt=Q2TB96,Q6X4W1,F5H603 | ||
|association_with_transcript=-13bp_to_ENST00000265663,ENST00000371473,ENST00000371474,ENST00000371475,ENST00000392812,ENST00000437259,NM_001130969,NM_001130970,NM_001130971,NM_001178064,NM_015537,uc004cmz.2,uc004cna.2,uc004cnb.2,uc004cnc.2,uc011mez.1_5end | |association_with_transcript=-13bp_to_ENST00000265663,ENST00000371473,ENST00000371474,ENST00000371475,ENST00000392812,ENST00000437259,NM_001130969,NM_001130970,NM_001130971,NM_001178064,NM_015537,uc004cmz.2,uc004cna.2,uc004cnb.2,uc004cnc.2,uc011mez.1_5end | ||
|cluster_id=chr9:140353799..140353811,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_NELF_5end | |description=CAGE_peak_2_at_NELF_5end | ||
|id=chr9:140353799..140353811,- | |id=chr9:140353799..140353811,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.07e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.91e-26!82;UBERON:0005743!1.21e-25!86;UBERON:0000073!7.15e-24!94;UBERON:0001016!7.15e-24!94;UBERON:0003075!9.37e-24!86;UBERON:0007284!9.37e-24!86;UBERON:0002346!2.18e-23!90;UBERON:0000955!4.05e-23!69;UBERON:0006238!4.05e-23!69;UBERON:0001049!2.52e-22!57;UBERON:0005068!2.52e-22!57;UBERON:0006241!2.52e-22!57;UBERON:0007135!2.52e-22!57;UBERON:0001893!1.71e-21!34;UBERON:0002616!1.84e-21!59;UBERON:0002020!2.77e-21!34;UBERON:0003528!2.77e-21!34;UBERON:0002791!8.10e-21!33;UBERON:0001869!1.58e-20!32;UBERON:0000924!1.72e-19!173;UBERON:0006601!1.72e-19!173;UBERON:0004121!1.86e-19!169;UBERON:0002780!1.86e-19!41;UBERON:0001890!1.86e-19!41;UBERON:0006240!1.86e-19!41;UBERON:0000033!2.97e-18!123;UBERON:0003080!4.09e-18!42;UBERON:0000153!1.01e-17!129;UBERON:0007811!1.01e-17!129;UBERON:0003056!8.79e-17!61;UBERON:0000956!9.89e-17!25;UBERON:0000203!9.89e-17!25;UBERON:0002619!7.56e-16!22;UBERON:0001950!1.53e-14!20;UBERON:0000475!3.56e-13!365;UBERON:0000483!9.97e-13!309;UBERON:0000119!1.82e-12!312;UBERON:0000481!2.08e-10!347;UBERON:0000064!4.16e-09!219;UBERON:0000025!4.94e-09!194;UBERON:0000477!5.05e-07!286;UBERON:0004111!6.24e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.89e-20;32!UBERON:0001893;3.01e-20;34!UBERON:0002791;4.72e-20;32!UBERON:0003528;5.19e-20;34!UBERON:0002020;5.19e-20;34!UBERON:0000956;3.64e-18;25!UBERON:0000203;3.64e-18;25!UBERON:0002619;2.48e-17;22!UBERON:0001950;6.93e-16;20!UBERON:0002780;2.23e-15;41!UBERON:0001890;2.23e-15;41!UBERON:0000073;1.47e-13;53!UBERON:0002616;1.47e-13;53!UBERON:0001017;3.84e-11;75!UBERON:0000955;7.58e-11;68!UBERON:0001016;1.15e-09;83!UBERON:0002420;9.07e-07;9!UBERON:0007245;9.07e-07;9!UBERON:0010009;9.07e-07;9!UBERON:0010011;9.07e-07;9!UBERON:0000454;9.07e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.89e-29,81;UBERON:0001016,1.94e-26,89;UBERON:0000955,6.96e-26,68;UBERON:0006238,6.96e-26,68;UBERON:0001049,3.32e-25,56;UBERON:0005068,3.32e-25,56;UBERON:0006241,3.32e-25,56;UBERON:0007135,3.32e-25,56;UBERON:0003075,9.28e-25,82;UBERON:0007284,9.28e-25,82;UBERON:0002346,2.42e-24,86;UBERON:0000073,1.40e-23,53;UBERON:0002616,1.40e-23,53;UBERON:0001893,1.21e-22,34;UBERON:0010371,1.29e-22,104;UBERON:0003528,2.02e-22,34;UBERON:0002020,2.02e-22,34;UBERON:0001869,1.27e-21,32;UBERON:0002791,2.79e-21,32;UBERON:0002780,1.70e-20,41;UBERON:0001890,1.70e-20,41;UBERON:0003080,1.70e-20,41;UBERON:0006240,1.70e-20,41;UBERON:0004121,3.22e-20,171;UBERON:0000924,3.22e-20,171;UBERON:0006601,3.22e-20,171;UBERON:0010314,3.91e-19,132;UBERON:0003056,5.43e-19,61;UBERON:0000956,1.32e-17,25;UBERON:0000203,1.32e-17,25;UBERON:0002619,1.14e-16,22;UBERON:0001950,2.73e-15,20;UBERON:0011216,2.32e-13,223;UBERON:0000483,2.00e-11,306;UBERON:0000119,4.01e-11,309;UBERON:0000025,3.58e-09,192;UBERON:0004111,7.08e-07,240 | |||
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| ||
|short_description=p2@NELF | |short_description=p2@NELF | ||
}} | }} |
Latest revision as of 17:24, 16 September 2015
Short description: | p2@NELF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NELF_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -13bp_to_ENST00000265663, ENST00000371473, ENST00000371474, ENST00000371475, ENST00000392812, ENST00000437259, NM_001130969, NM_001130970, NM_001130971, NM_001178064, NM_015537, uc004cmz.2, uc004cna.2, uc004cnb.2, uc004cnc.2, uc011mez.1_5end |
EntrezGene: | NELF |
HGNC: | 29843 |
UniProt: | Q2TB96Q6X4W1F5H603 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data