FFCP PHASE1:Hg19::chr14:58765217..58765301,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:58765217..58765301,+
|short_description=p1@ARID4A
|description=CAGE_peak_1_at_ARID4A_5end
|association_with_transcript=0bp_to_ENST00000348476,ENST00000395...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5926 | |EntrezGene=5926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9885 | |HGNC=9885 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAR5,P29374,Q05CG0 | |UniProt=F8WAR5,P29374,Q05CG0 | ||
|association_with_transcript=0bp_to_ENST00000348476,ENST00000395168,ENST00000431612,NM_002892,NM_023000,NM_023001,uc001xdo.2,uc001xdp.2,uc001xdq.2,uc010apf.1_5end | |||
|cluster_id=chr14:58765217..58765301,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_ARID4A_5end | |||
|id=chr14:58765217..58765301,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.51e-39!140;CL:0000037!7.70e-39!172;CL:0000566!7.70e-39!172;CL:0002032!3.54e-35!165;CL:0000837!3.54e-35!165;CL:0000988!4.14e-33!182;CL:0002031!9.89e-31!124;CL:0002087!1.93e-27!119;CL:0000763!7.57e-21!112;CL:0000049!7.57e-21!112;CL:0000766!2.09e-19!76;CL:0000557!1.10e-16!71;CL:0000839!4.88e-16!70;CL:0002009!1.42e-13!65;CL:0000838!1.45e-13!52;CL:0000542!2.92e-13!53;CL:0000051!2.92e-13!53;CL:0002194!9.93e-13!63;CL:0000576!9.93e-13!63;CL:0000040!9.93e-13!63;CL:0000559!9.93e-13!63;CL:0000791!2.26e-10!18;CL:0000789!2.26e-10!18;CL:0002420!2.26e-10!18;CL:0002419!2.26e-10!18;CL:0000790!2.26e-10!18;CL:0002057!1.69e-09!42;CL:0000860!2.13e-09!45;CL:0000084!7.52e-08!25;CL:0000827!7.52e-08!25;CL:0000625!2.43e-07!11;CL:0000451!7.79e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.40e-10;18!CL:0000789;2.40e-10;18!CL:0002419;2.40e-10;18!CL:0000738;1.56e-08;136!CL:0000542;2.28e-08;53!CL:0000766;3.18e-08;69!CL:0002087;5.95e-08;104!CL:0000084;7.09e-08;25!CL:0000576;1.95e-07;48!CL:0000625;2.46e-07;11!CL:0000236;6.16e-07;13!CL:0000451;7.15e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.54e-39,136;CL:0000037,6.09e-39,168;CL:0002032,2.87e-35,161;CL:0000837,2.87e-35,161;CL:0000988,5.60e-34,177;CL:0002031,5.88e-31,120;CL:0002087,1.23e-27,115;CL:0000763,5.87e-21,108;CL:0000049,5.87e-21,108;CL:0000766,1.03e-19,72;CL:0000557,6.00e-17,67;CL:0000839,2.76e-16,66;CL:0002009,8.95e-14,61;CL:0000838,1.45e-13,52;CL:0000542,2.92e-13,53;CL:0000051,2.92e-13,53;CL:0002194,6.48e-13,59;CL:0000576,6.48e-13,59;CL:0000040,6.48e-13,59;CL:0000559,6.48e-13,59;CL:0000473,1.28e-10,48;CL:0000234,1.28e-10,48;CL:0000791,2.26e-10,18;CL:0000789,2.26e-10,18;CL:0002420,2.26e-10,18;CL:0002419,2.26e-10,18;CL:0000790,2.26e-10,18;CL:0000860,1.69e-09,42;CL:0002057,1.69e-09,42;CL:0000084,7.52e-08,25;CL:0000827,7.52e-08,25;CL:0000625,2.43e-07,11;CL:0000451,7.79e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000790;2.40e-10;18!CL:0000051;2.28e-08;53!CL:0002057;3.55e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.14e-22!115;UBERON:0002390!4.41e-21!102;UBERON:0003061!4.41e-21!102;UBERON:0002193!2.47e-18!112;UBERON:0002371!1.45e-13!80;UBERON:0001474!1.02e-12!86;UBERON:0002405!8.90e-12!115;UBERON:0004765!1.07e-09!101;UBERON:0001434!1.07e-09!101;UBERON:0000178!5.26e-07!15;UBERON:0000179!5.26e-07!15;UBERON:0000463!5.26e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.16e-07;15!UBERON:0000179;5.16e-07;15!UBERON:0000463;5.16e-07;15!UBERON:0007023;7.16e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.40e-22,114;UBERON:0002390,3.04e-21,98;UBERON:0003061,3.04e-21,98;UBERON:0002193,2.23e-18,108;UBERON:0002371,1.16e-13,76;UBERON:0002405,3.04e-13,93;UBERON:0001474,9.09e-13,82;UBERON:0004765,2.56e-10,90;UBERON:0001434,7.26e-09,100;UBERON:0000178,5.26e-07,15;UBERON:0000179,5.26e-07,15;UBERON:0000463,5.26e-07,15 | |||
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| ||
|short_description=p1@ARID4A | |||
}} | }} |
Latest revision as of 18:46, 24 September 2015
Short description: | p1@ARID4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARID4A_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000348476, ENST00000395168, ENST00000431612, NM_002892, NM_023000, NM_023001, uc001xdo.2, uc001xdp.2, uc001xdq.2, uc010apf.1_5end |
EntrezGene: | ARID4A |
HGNC: | 9885 |
UniProt: | F8WAR5P29374Q05CG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.40e-22 | 114 |
hematopoietic system | 3.04e-21 | 98 |
blood island | 3.04e-21 | 98 |
hemolymphoid system | 2.23e-18 | 108 |
bone marrow | 1.16e-13 | 76 |
immune system | 3.04e-13 | 93 |
bone element | 9.09e-13 | 82 |
skeletal element | 2.56e-10 | 90 |
skeletal system | 7.26e-09 | 100 |
blood | 5.26e-07 | 15 |
haemolymphatic fluid | 5.26e-07 | 15 |
organism substance | 5.26e-07 | 15 |