FFCP PHASE1:Hg19::chr14:55604923..55604934,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:55604923..55604934,+
|short_description=p10@LGALS3
|description=CAGE_peak_10_at_LGALS3_5end
|association_with_transcript=161bp_to_ENST00000556263_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3958 | |EntrezGene=3958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6563 | |HGNC=6563 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_ENST00000556263_5end | |||
|cluster_id=chr14:55604923..55604934,+ | |||
|description=CAGE_peak_10_at_LGALS3_5end | |||
|id=chr14:55604923..55604934,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.34e-26!70;CL:0002194!4.80e-24!63;CL:0000576!4.80e-24!63;CL:0000040!4.80e-24!63;CL:0000559!4.80e-24!63;CL:0000557!3.81e-23!71;CL:0002009!1.51e-22!65;CL:0000860!2.85e-22!45;CL:0002057!2.92e-21!42;CL:0000766!6.08e-20!76;CL:0000763!3.38e-08!112;CL:0000049!3.38e-08!112;CL:0002031!6.66e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-54;33!CL:0002057;1.19e-54;33!CL:0000473;3.73e-46;39!CL:0000234;3.73e-46;39!CL:0000576;5.48e-25;48!CL:0000766;3.50e-21;69!CL:0000763;6.18e-11;100!CL:0002087;5.45e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.54e-48,66;CL:0000473,2.97e-48,48;CL:0000234,2.97e-48,48;CL:0000557,8.43e-45,67;CL:0000860,4.15e-44,42;CL:0002057,4.15e-44,42;CL:0002194,8.32e-43,59;CL:0000576,8.32e-43,59;CL:0000040,8.32e-43,59;CL:0000559,8.32e-43,59;CL:0002009,3.80e-41,61;CL:0000766,4.30e-41,72;CL:0000763,3.44e-26,108;CL:0000049,3.44e-26,108;CL:0002031,1.13e-22,120;CL:0002087,4.44e-18,115;CL:0000738,1.18e-17,136;CL:0002032,1.20e-14,161;CL:0000837,1.20e-14,161;CL:0000037,1.13e-13,168;CL:0000988,1.53e-12,177;CL:0002320,3.01e-08,361;CL:0000219,4.33e-08,386;CL:0000134,5.25e-08,354 | |||
|ontology_enrichment_development_v019=CL:0002057;7.34e-34;42!CL:0000049;9.59e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.69e-21!80;UBERON:0004765!1.32e-20!101;UBERON:0001434!1.32e-20!101;UBERON:0001474!8.17e-20!86;UBERON:0002390!7.40e-15!102;UBERON:0003061!7.40e-15!102;UBERON:0002193!2.73e-14!112;UBERON:0002204!2.42e-13!167;UBERON:0002405!5.81e-13!115;UBERON:0000926!1.12e-09!448;UBERON:0004120!1.12e-09!448;UBERON:0006603!1.12e-09!448;UBERON:0000468!1.00e-08!659;UBERON:0000062!1.77e-08!511;UBERON:0003081!3.48e-08!216;UBERON:0000480!4.17e-08!626;UBERON:0000467!5.72e-08!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.19e-07;10!UBERON:0000158;3.19e-07;10!UBERON:0000305;5.84e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.20e-41,76;UBERON:0001474,3.15e-37,82;UBERON:0004765,2.65e-35,90;UBERON:0002405,6.97e-34,93;UBERON:0001434,7.47e-31,100;UBERON:0002390,1.10e-29,98;UBERON:0003061,1.10e-29,98;UBERON:0002193,6.75e-28,108;UBERON:0002204,5.80e-17,167;UBERON:0003081,3.43e-15,203;UBERON:0000926,3.50e-10,315;UBERON:0004120,3.50e-10,315;UBERON:0006603,3.50e-10,315;UBERON:0002384,9.82e-08,371;UBERON:0000305,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,2.61701557230111,0,0,0.783556884599516,0.245733936501509,0,0.873765488520689,1.31883489114227,0.37129905888014,0.662794751455832,0.672325146451775,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,1.94336199611388,0,1.74477886535478,1.51150377475524,1.4555043671269,2.32429036905685,1.23350366406548,2.78735733805593,2.3015391385772,1.0246428261164,1.41889337933151,2.06847408441971,1.29096936716765,4.06279459783025,2.82363509313907,3.0019676506363,4.04502272001152,2.44867113896722,1.28371610830437,2.55734850319616,0.989553900560148,1.99463657621632,0.852449501065388,1.7412554317715,1.70215567407342,1.24564449799115,1.50749199154046,0.521482918420201,1.3031330682307,1.21079900526674,0.368277635987565,3.48108626184973,0.845021145247767,0.425208599930087,0,0.336985893439485,0.450530678524519,0.32145117339416,0,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0.973269740605272,0.0945348171640679,0,0,0.196468613246569,0.364295288292542,0,0.324547393654683,0.870648686496336,1.32957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.25326102332916,0,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0.151357427644931,0,0.234321431833797,0.624320153660641,0,0.448346041655403,0.469737994575059,0,0.280901613404497,0.408308342509787,0.368502951935304,0.206651562351531,0,0.494533858557114,0,1.43723628363248,0,0.125118519871964,0,0.438977620880838,0,0.600952235626387,0.340296549480063,0,0,0.847727604638247,0,0.309157587715317,0.515281080091258,0.18611685633159,0,0.194874010322397,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0.236613600079688,0,0.482022059766964,0.55146986366197,0.653638332277218,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0.0925884451585296,0,2.07986957055916,0,0.115930404975077,0,0.288732895522148,0,0,2.37061319387782,0.858486162094873,0.246217006087397,0.702012795417713,0.891786973732369,0.93733833986777,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,1.24396869324463,1.58531948758658,1.13618190083742,0.190493682876507,0,1.17217447210047,1.71072446022705,1.54241239054985,0.901029173531752,0.857479297891735,0,0,0.07333828582095,0.258543431515556,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,2.43247561282381,4.01805673145701,2.10833939483032,0,0,0,0,0.61642896765115,0,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,0,1.35632511849868,0.831883446123229,1.60586089917446,0.473107245101804,0.468565659970853,0,0,0,0,0.553107505625109,0.347534457872331,0.391602314925481,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.241718899183244,0.200506470303285,0.184161977871793,0,0.910455840033585,1.44236856455367,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0.877039506583738,1.3071772551245,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.275673144969061,0.107420244868274,0.435050081742686,0.255679882248303,0,0.165284915360978,0,0,0.30347334256665,0.929691098594572,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.471249609382746,0,0,0.842516912477962,0,0.487426979262569,0,0.272999822815972,0.424216295861138,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0.844430541190656,0.987884678879706,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,1.43246690842614,0.593929361665277,1.84296421259539,0,0,0,0,0,0.796991953004279,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0.508507300585533,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.461701551022782,0.113942055847001,0,0,0.217294743844016,1.27600463892768,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,1.83309043480088,0,0.370691816839509,0,0,0,0,0.182454789215666,0,0.242780379534093,0.394584402849391,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,1.56203764501618,0.0979923974143777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| ||
|short_description=p10@LGALS3 | |||
}} | }} |
Latest revision as of 16:14, 24 September 2015
Short description: | p10@LGALS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LGALS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 161bp_to_ENST00000556263_5end |
EntrezGene: | LGALS3 |
HGNC: | 6563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.54e-48 | 66 |
defensive cell | 2.97e-48 | 48 |
phagocyte | 2.97e-48 | 48 |
granulocyte monocyte progenitor cell | 8.43e-45 | 67 |
classical monocyte | 4.15e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.15e-44 | 42 |
monopoietic cell | 8.32e-43 | 59 |
monocyte | 8.32e-43 | 59 |
monoblast | 8.32e-43 | 59 |
promonocyte | 8.32e-43 | 59 |
macrophage dendritic cell progenitor | 3.80e-41 | 61 |
myeloid leukocyte | 4.30e-41 | 72 |
myeloid cell | 3.44e-26 | 108 |
common myeloid progenitor | 3.44e-26 | 108 |
hematopoietic lineage restricted progenitor cell | 1.13e-22 | 120 |
nongranular leukocyte | 4.44e-18 | 115 |
leukocyte | 1.18e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.20e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-14 | 161 |
hematopoietic stem cell | 1.13e-13 | 168 |
hematopoietic cell | 1.53e-12 | 177 |
connective tissue cell | 3.01e-08 | 361 |
motile cell | 4.33e-08 | 386 |
mesenchymal cell | 5.25e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.20e-41 | 76 |
bone element | 3.15e-37 | 82 |
skeletal element | 2.65e-35 | 90 |
immune system | 6.97e-34 | 93 |
skeletal system | 7.47e-31 | 100 |
hematopoietic system | 1.10e-29 | 98 |
blood island | 1.10e-29 | 98 |
hemolymphoid system | 6.75e-28 | 108 |
musculoskeletal system | 5.80e-17 | 167 |
lateral plate mesoderm | 3.43e-15 | 203 |
mesoderm | 3.50e-10 | 315 |
mesoderm-derived structure | 3.50e-10 | 315 |
presumptive mesoderm | 3.50e-10 | 315 |
connective tissue | 9.82e-08 | 371 |
amnion | 5.70e-07 | 7 |