FFCP PHASE1:Hg19::chr9:132805478..132805522,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23048 | |EntrezGene=23048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17069 | |HGNC=17069 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGQ4,Q96RU3 | |UniProt=E9PGQ4,Q96RU3 | ||
|association_with_transcript=-5bp_to_ENST00000420781,ENST00000446176,NM_015033,uc004byw.1,uc004byz.1,uc004bza.2,uc011mbv.1,uc011mbw.1_5end | |association_with_transcript=-5bp_to_ENST00000420781,ENST00000446176,NM_015033,uc004byw.1,uc004byz.1,uc004bza.2,uc011mbv.1,uc011mbw.1_5end | ||
|cluster_id=chr9:132805478..132805522,- | |||
|description=CAGE_peak_2_at_FNBP1_5end | |description=CAGE_peak_2_at_FNBP1_5end | ||
|id=chr9:132805478..132805522,- | |id=chr9:132805478..132805522,- | ||
|ontology_enrichment_celltype=CL:0000738!1.10e-12!140;CL:0000037!1.67e-11!172;CL:0000566!1.67e-11!172;CL:0000988!3.08e-11!182;CL:0002032!4.23e-11!165;CL:0000837!4.23e-11!165;CL:0002087!8.11e-08!119;CL:0000838!1.00e-07!52;CL:0002031!1.26e-07!124;CL:0000542!1.99e-07!53;CL:0000051!1.99e-07!53 | |ontology_enrichment_celltype=CL:0000738!1.10e-12!140;CL:0000037!1.67e-11!172;CL:0000566!1.67e-11!172;CL:0000988!3.08e-11!182;CL:0002032!4.23e-11!165;CL:0000837!4.23e-11!165;CL:0002087!8.11e-08!119;CL:0000838!1.00e-07!52;CL:0002031!1.26e-07!124;CL:0000542!1.99e-07!53;CL:0000051!1.99e-07!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.06e-13,136;CL:0000037,9.61e-12,168;CL:0000988,1.22e-11,177;CL:0002032,2.42e-11,161;CL:0000837,2.42e-11,161;CL:0002087,4.65e-08,115;CL:0002031,7.47e-08,120;CL:0000838,1.00e-07,52;CL:0000542,1.98e-07,53;CL:0000051,1.98e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.78e-26!115;UBERON:0001049!1.40e-13!57;UBERON:0005068!1.40e-13!57;UBERON:0006241!1.40e-13!57;UBERON:0007135!1.40e-13!57;UBERON:0002616!1.44e-09!59;UBERON:0003075!3.29e-09!86;UBERON:0007284!3.29e-09!86;UBERON:0003080!3.44e-09!42;UBERON:0002780!6.73e-09!41;UBERON:0001890!6.73e-09!41;UBERON:0006240!6.73e-09!41;UBERON:0002346!1.06e-08!90;UBERON:0000955!3.11e-08!69;UBERON:0006238!3.11e-08!69;UBERON:0002020!8.28e-08!34;UBERON:0003528!8.28e-08!34;UBERON:0001893!1.07e-07!34;UBERON:0002791!2.31e-07!33;UBERON:0001017!4.32e-07!82;UBERON:0001869!6.89e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.65e-07;53!UBERON:0002616;2.65e-07;53!UBERON:0007023;7.14e-07;114!UBERON:0002780;9.52e-07;41!UBERON:0001890;9.52e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.75e-26,114;UBERON:0001049,2.82e-13,56;UBERON:0005068,2.82e-13,56;UBERON:0006241,2.82e-13,56;UBERON:0007135,2.82e-13,56;UBERON:0000073,8.90e-12,53;UBERON:0002616,8.90e-12,53;UBERON:0002780,6.72e-09,41;UBERON:0001890,6.72e-09,41;UBERON:0003080,6.72e-09,41;UBERON:0006240,6.72e-09,41;UBERON:0000955,5.57e-08,68;UBERON:0006238,5.57e-08,68;UBERON:0003528,8.28e-08,34;UBERON:0002020,8.28e-08,34;UBERON:0003075,9.56e-08,82;UBERON:0007284,9.56e-08,82;UBERON:0001893,1.07e-07,34;UBERON:0010314,2.30e-07,132;UBERON:0002346,2.69e-07,86;UBERON:0001016,5.45e-07,89;UBERON:0002791,6.38e-07,32;UBERON:0001869,6.89e-07,32;UBERON:0001017,7.41e-07,81 | |||
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| ||
|short_description=p2@FNBP1 | |short_description=p2@FNBP1 | ||
}} | }} |
Latest revision as of 00:18, 16 September 2015
Short description: | p2@FNBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FNBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000420781, ENST00000446176, NM_015033, uc004byw.1, uc004byz.1, uc004bza.2, uc011mbv.1, uc011mbw.1_5end |
EntrezGene: | FNBP1 |
HGNC: | 17069 |
UniProt: | E9PGQ4Q96RU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.06e-13 | 136 |
hematopoietic stem cell | 9.61e-12 | 168 |
hematopoietic cell | 1.22e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.42e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-11 | 161 |
nongranular leukocyte | 4.65e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 7.47e-08 | 120 |
lymphoid lineage restricted progenitor cell | 1.00e-07 | 52 |
lymphocyte | 1.98e-07 | 53 |
common lymphoid progenitor | 1.98e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.75e-26 | 114 |
neural tube | 2.82e-13 | 56 |
neural rod | 2.82e-13 | 56 |
future spinal cord | 2.82e-13 | 56 |
neural keel | 2.82e-13 | 56 |
regional part of nervous system | 8.90e-12 | 53 |
regional part of brain | 8.90e-12 | 53 |
regional part of forebrain | 6.72e-09 | 41 |
forebrain | 6.72e-09 | 41 |
anterior neural tube | 6.72e-09 | 41 |
future forebrain | 6.72e-09 | 41 |
brain | 5.57e-08 | 68 |
future brain | 5.57e-08 | 68 |
brain grey matter | 8.28e-08 | 34 |
gray matter | 8.28e-08 | 34 |
neural plate | 9.56e-08 | 82 |
presumptive neural plate | 9.56e-08 | 82 |
telencephalon | 1.07e-07 | 34 |
structure with developmental contribution from neural crest | 2.30e-07 | 132 |
neurectoderm | 2.69e-07 | 86 |
nervous system | 5.45e-07 | 89 |
regional part of telencephalon | 6.38e-07 | 32 |
cerebral hemisphere | 6.89e-07 | 32 |
central nervous system | 7.41e-07 | 81 |