FFCP PHASE1:Hg19::chr9:130915632..130915647,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:130915632..130915647,+ | |||
|coexpression_cluster_id=C484 | |||
|description=CAGE_peak_at_chr9:130915632..130915647,+ | |description=CAGE_peak_at_chr9:130915632..130915647,+ | ||
|id=chr9:130915632..130915647,+ | |id=chr9:130915632..130915647,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.84e-16!254;CL:0000223!8.71e-13!59;CL:0002076!2.83e-12!43 | |ontology_enrichment_celltype=CL:0000066!7.84e-16!254;CL:0000223!8.71e-13!59;CL:0002076!2.83e-12!43 | ||
|ontology_enrichment_celltype_v019=CL:1001319;8.05e-14;1!CL:1000600;8.05e-14;1!CL:1000415;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,7.55e-14,1;CL:1000600,7.55e-14,1;CL:0000223,5.48e-10,58;CL:0000066,6.45e-08,253;CL:0002076,1.88e-07,42;CL:1000415,2.25e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.42e-20!106;DOID:1749!3.76e-18!14;DOID:299!3.12e-14!25;DOID:0050687!2.17e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:299;3.49e-08;25!DOID:4468;2.05e-07;2!DOID:4929;2.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.16e-13,106;DOID:0050687,3.55e-09,143;DOID:299,3.29e-08,25;DOID:4929,1.75e-07,2;DOID:4468,1.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.37e-16!7;UBERON:0001173!1.37e-16!7;UBERON:0004912!1.37e-16!7;UBERON:0001007!1.00e-15!155;UBERON:0001555!1.00e-15!155;UBERON:0007026!1.00e-15!155;UBERON:0004119!1.64e-15!169;UBERON:0000925!1.64e-15!169;UBERON:0006595!1.64e-15!169;UBERON:0000077!3.60e-13!130;UBERON:0004921!4.73e-13!129;UBERON:0004185!4.73e-13!129;UBERON:0001041!1.73e-10!98;UBERON:0000466!4.02e-10!126;UBERON:0000161!4.60e-10!35;UBERON:0002394!1.02e-09!4;UBERON:0003928!1.02e-09!4;UBERON:0005911!3.45e-09!82;UBERON:0001004!5.42e-09!72;UBERON:0002110!1.40e-08!3;UBERON:0006242!1.40e-08!3;UBERON:0000344!1.61e-08!12;UBERON:0000464!4.93e-08!104;UBERON:0000166!1.46e-07!21;UBERON:0000974!1.48e-07!10;UBERON:0003929!2.80e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;8.05e-14;1!UBERON:0001256;8.05e-14;1!UBERON:0001259;8.05e-14;1!UBERON:0002294;4.83e-08;7!UBERON:0001173;4.83e-08;7!UBERON:0006562;9.25e-08;2!UBERON:0001255;1.50e-07;2!UBERON:0001556;1.50e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.55e-14,1;UBERON:0001256,7.55e-14,1;UBERON:0001259,7.55e-14,1;UBERON:0001255,1.45e-07,2;UBERON:0001556,1.45e-07,2;UBERON:0002075,9.97e-07,18 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0.329250856225877,0,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,25.5985149241792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.4875642382488,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,5.01259289091706,0,0,2.3948309234694,0,0,0,0,0,0,0,7.73795448341398,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,3.16373037092745,0,0,0,1.17330829640882,0.961905843018405,0.426905989478705,4.99524023955326,0,0,0,1.1524383839052,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,28.107734080711,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,0.430227358820278,0,0.0852134047591577,0,4.35303050233695,0,0,0.782988022584546,0.98150233615243,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,15.5341926586922,0.352894871715692,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0.0645889098360061,0,0,0,0,0.653150243690884,0.342233301085281,0.202056159043763,0.78894425931944,0.665320713092027,3.98876016193775,0,0,1.79650404213174,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr9:130915632..130915647,+ | |short_description=p@chr9:130915632..130915647,+ | ||
}} | }} |
Latest revision as of 23:08, 31 July 2015
Short description: | p@chr9:130915632..130915647, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130915632..130915647, + |
Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.55e-14 | 1 |
lower urinary tract cell | 7.55e-14 | 1 |
endodermal cell | 5.48e-10 | 58 |
epithelial cell | 6.45e-08 | 253 |
endo-epithelial cell | 1.88e-07 | 42 |
epithelial cell of gall bladder | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.55e-14 | 1 |
wall of urinary bladder | 7.55e-14 | 1 |
mucosa of urinary bladder | 7.55e-14 | 1 |
urinary bladder | 1.45e-07 | 2 |
lower urinary tract | 1.45e-07 | 2 |
viscus | 9.97e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.16e-13 | 106 |
cell type cancer | 3.55e-09 | 143 |
adenocarcinoma | 3.29e-08 | 25 |
tubular adenocarcinoma | 1.75e-07 | 2 |
clear cell adenocarcinoma | 1.99e-07 | 2 |