FFCP PHASE1:Hg19::chr9:130914212..130914239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:130914212..130914239,+ | |||
|coexpression_cluster_id=C484 | |||
|description=CAGE_peak_at_chr9:130914212..130914239,+ | |description=CAGE_peak_at_chr9:130914212..130914239,+ | ||
|id=chr9:130914212..130914239,+ | |id=chr9:130914212..130914239,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.53e-17!43;CL:0000223!1.39e-16!59;CL:0000066!2.19e-14!254;CL:0002251!1.19e-10!21;CL:0002621!6.99e-10!3 | |ontology_enrichment_celltype=CL:0002076!2.53e-17!43;CL:0000223!1.39e-16!59;CL:0000066!2.19e-14!254;CL:0002251!1.19e-10!21;CL:0002621!6.99e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.88e-16;3!CL:1001319;5.70e-13;1!CL:1000600;5.70e-13;1!CL:0002076;2.46e-10;42!CL:0002149;8.08e-09;6!CL:0002255;8.08e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.49e-16,3;CL:1001319,2.95e-13,1;CL:1000600,2.95e-13,1;CL:0002076,3.96e-13,42;CL:0000223,4.05e-12,58;CL:0002149,8.57e-09,6;CL:0002255,8.57e-09,6;CL:0000066,3.10e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000223;3.06e-08;58!UBERON:0008814;4.04e-07;2!UBERON:0010056;4.04e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!4.94e-25!14;DOID:305!8.46e-18!106;DOID:0050687!2.66e-11!143;DOID:3493!2.23e-07!2;DOID:299!3.51e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3111;5.70e-13;1!DOID:3603;5.70e-13;1!DOID:299;1.23e-11;25!DOID:3001;8.08e-09;6!DOID:3493;4.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,4.77e-13,1;DOID:3603,4.77e-13,1;DOID:299,1.15e-11,25;DOID:305,7.05e-10,106;DOID:3001,8.57e-09,6;DOID:3493,3.28e-07,2;DOID:0050687,5.61e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.67e-13!169;UBERON:0000925!9.67e-13!169;UBERON:0006595!9.67e-13!169;UBERON:0000161!3.25e-12!35;UBERON:0001007!1.50e-10!155;UBERON:0001555!1.50e-10!155;UBERON:0007026!1.50e-10!155;UBERON:0001949!6.99e-10!3;UBERON:0000344!5.35e-09!12;UBERON:0005156!1.59e-08!59;UBERON:0000990!1.59e-08!59;UBERON:0001004!2.37e-08!72;UBERON:0000166!3.77e-08!21;UBERON:0004921!5.28e-08!129;UBERON:0004185!5.28e-08!129;UBERON:0000077!5.78e-08!130;UBERON:0003127!1.29e-07!2;UBERON:0003343!2.95e-07!4;UBERON:0004785!2.95e-07!4;UBERON:0003133!5.90e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;5.70e-13;1!UBERON:0001256;5.70e-13;1!UBERON:0001259;5.70e-13;1!UBERON:0000945;2.97e-10;5!UBERON:0010039;2.97e-10;5!UBERON:0006562;2.28e-07;2!UBERON:0001255;4.04e-07;2!UBERON:0003127;4.04e-07;2!UBERON:0000341;4.04e-07;2!UBERON:0001556;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.95e-13,1;UBERON:0001256,2.95e-13,1;UBERON:0001259,2.95e-13,1;UBERON:0001255,2.91e-07,2;UBERON:0001556,2.91e-07,2;UBERON:0003127,3.09e-07,2;UBERON:0000341,5.60e-07,2;UBERON:0004921,6.17e-07,118;UBERON:0000945,9.11e-07,8;UBERON:0010039,9.11e-07,8 | |||
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| ||
|short_description=p@chr9:130914212..130914239,+ | |short_description=p@chr9:130914212..130914239,+ | ||
}} | }} |
Latest revision as of 23:08, 31 July 2015
Short description: | p@chr9:130914212..130914239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130914212..130914239, + |
Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.49e-16 | 3 |
bladder cell | 2.95e-13 | 1 |
lower urinary tract cell | 2.95e-13 | 1 |
endo-epithelial cell | 3.96e-13 | 42 |
endodermal cell | 4.05e-12 | 58 |
epithelial cell of uterus | 8.57e-09 | 6 |
stromal cell of endometrium | 8.57e-09 | 6 |
epithelial cell | 3.10e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.95e-13 | 1 |
wall of urinary bladder | 2.95e-13 | 1 |
mucosa of urinary bladder | 2.95e-13 | 1 |
urinary bladder | 2.91e-07 | 2 |
lower urinary tract | 2.91e-07 | 2 |
open tracheal system trachea | 3.09e-07 | 2 |
throat | 5.60e-07 | 2 |
subdivision of digestive tract | 6.17e-07 | 118 |
stomach | 9.11e-07 | 8 |
food storage organ | 9.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 4.77e-13 | 1 |
mucinous cystadenocarcinoma | 4.77e-13 | 1 |
adenocarcinoma | 1.15e-11 | 25 |
carcinoma | 7.05e-10 | 106 |
female reproductive endometrioid cancer | 8.57e-09 | 6 |
signet ring cell adenocarcinoma | 3.28e-07 | 2 |
cell type cancer | 5.61e-07 | 143 |