FFCP PHASE1:Hg19::chr2:24930425..24930435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8648 | |EntrezGene=8648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7668 | |HGNC=7668 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-160bp_to_ENST00000486198_5end | |association_with_transcript=-160bp_to_ENST00000486198_5end | ||
|cluster_id=chr2:24930425..24930435,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_NCOA1_5end | |description=CAGE_peak_4_at_NCOA1_5end | ||
|id=chr2:24930425..24930435,+ | |id=chr2:24930425..24930435,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.38e-07!42;CL:0000860!5.54e-07!45 | |ontology_enrichment_celltype=CL:0002057!1.38e-07!42;CL:0000860!5.54e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000775;8.44e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,9.43e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.05e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.98e-13!115;UBERON:0001049!5.02e-12!57;UBERON:0005068!5.02e-12!57;UBERON:0006241!5.02e-12!57;UBERON:0007135!5.02e-12!57;UBERON:0002616!1.49e-11!59;UBERON:0002020!2.34e-11!34;UBERON:0003528!2.34e-11!34;UBERON:0001893!5.07e-11!34;UBERON:0001869!8.04e-11!32;UBERON:0002791!8.08e-11!33;UBERON:0001017!9.78e-11!82;UBERON:0000955!1.53e-10!69;UBERON:0006238!1.53e-10!69;UBERON:0002619!5.68e-10!22;UBERON:0002780!8.65e-10!41;UBERON:0001890!8.65e-10!41;UBERON:0006240!8.65e-10!41;UBERON:0005743!3.17e-09!86;UBERON:0003080!3.20e-09!42;UBERON:0001950!1.08e-08!20;UBERON:0000073!1.18e-08!94;UBERON:0001016!1.18e-08!94;UBERON:0000956!3.40e-08!25;UBERON:0000203!3.40e-08!25;UBERON:0003075!1.05e-07!86;UBERON:0007284!1.05e-07!86;UBERON:0002346!2.57e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.89e-22;22!UBERON:0000956;4.17e-19;25!UBERON:0000203;4.17e-19;25!UBERON:0003528;5.78e-17;34!UBERON:0002020;5.78e-17;34!UBERON:0001950;5.79e-17;20!UBERON:0001869;6.10e-16;32!UBERON:0002791;2.16e-15;32!UBERON:0001871;1.19e-13;6!UBERON:0001893;2.18e-13;34!UBERON:0002780;4.19e-11;41!UBERON:0001890;4.19e-11;41!UBERON:0000073;1.31e-10;53!UBERON:0002616;1.31e-10;53!UBERON:0002771;7.20e-09;2!UBERON:0001954;2.31e-08;2!UBERON:0003022;2.31e-08;2!UBERON:0002421;2.31e-08;2!UBERON:0002600;2.31e-08;2!UBERON:0000349;3.40e-07;5!UBERON:0000955;7.25e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.65e-22,22;UBERON:0000956,3.39e-19,25;UBERON:0000203,3.39e-19,25;UBERON:0003528,1.71e-18,34;UBERON:0002020,1.71e-18,34;UBERON:0002791,3.98e-17,32;UBERON:0001869,3.98e-17,32;UBERON:0001950,6.38e-17,20;UBERON:0000073,1.87e-16,53;UBERON:0002616,1.87e-16,53;UBERON:0001893,5.64e-16,34;UBERON:0001049,2.26e-15,56;UBERON:0005068,2.26e-15,56;UBERON:0006241,2.26e-15,56;UBERON:0007135,2.26e-15,56;UBERON:0001871,1.50e-13,6;UBERON:0002780,8.14e-13,41;UBERON:0001890,8.14e-13,41;UBERON:0003080,8.14e-13,41;UBERON:0006240,8.14e-13,41;UBERON:0000955,9.16e-12,68;UBERON:0006238,9.16e-12,68;UBERON:0003075,1.29e-10,82;UBERON:0007284,1.29e-10,82;UBERON:0001017,1.36e-10,81;UBERON:0002346,6.18e-10,86;UBERON:0001016,3.75e-09,89;UBERON:0003056,4.07e-09,61;UBERON:0002771,1.18e-08,2;UBERON:0001954,1.18e-08,2;UBERON:0003022,1.18e-08,2;UBERON:0002421,1.18e-08,2;UBERON:0002600,1.18e-08,2;UBERON:0010371,1.39e-08,104;UBERON:0000349,1.75e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0.553995408531877,1.40381113229099,0.868043482863407,0,0,0,0.872389432677388,0,0.970336244751265,1.16214518452842,0.411167888021826,0.929119112685311,1.43846196161075,0,0.709446689665756,0.344745680736619,1.93645405075148,0,0.752969358170419,0.818718450173537,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0.997318288108159,0.852449501065388,1.7412554317715,0,0.622822248995575,1.25624332628372,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0,0.22465726229299,0.450530678524519,0.964353520182481,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.590129310341499,1.17903228824749,0.616804496998528,0.334372990781356,0.651844533267181,0,0,0.334231370655521,0,0.221533894583621,0.812411591295047,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,1.87208137048455,0.868946423296794,0,0.670700859703636,0,0,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0.348259474598534,0.26591592103773,0.715471872916026,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0,0.309157587715317,0.257640540045629,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,0,0.651616610620649,0,1.44331342025273,0.34779121492523,0,0,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0,0.288239906833923,0.25248486685276,0.190493682876507,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0.301439377059586,0.871533458600294,0.499864955910285,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0.144781306667579,0,0.358121926479791,0.336255431980582,0.197030760201927,0.215627574859517,1.02674429023799,0.76228387266739,0,0,0.502548796003046,1.27587750330633,10.4860983352606,14.9580729602012,1.24324654030811,0.12269149171914,0,0,0.415941723061614,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,1.03384013061444,1.07857100409308,0.426910231213777,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.429680979473094,0.145016693914229,0.255679882248303,0.356128142586949,0.330569830721956,0,0,0.2023155617111,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.565621727814851,0,0,0,0.438450885253763,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,1.52927441428475,1.13929437434833,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0.106824071127473,0,0,0,0,0.355709216742071,0,0.798317485731266,0,0.211673582723883,0,0.280797178113459,0.456469358066384,0.47003968731907,0,0.338583555603207,0.642352300414798,0.201799707191048,0,0,0,0,0,0.586164286206121,0.556812347790485,2.46174797895425,0,0,0,0,0.293016358543788,0,0.334330152832435,0,0,0.890894042497916,0.614321404198464,0.994147647766298,1.54736358051564,0.222617410045812,0.16480387422676,0,0.597743964753209,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0.463840490809256,0,0,0.0874599999961957,0,0,0,0.945550727071745,0.344743373241465,0.291604613383254,1.21537496453305,0.885741385813839,1.32656082487949,1.52581736317083,1.10579259931225,1.47773809476774,0.658156191461918,0.10893846351899,0,0.307801034015188,0.113942055847001,0,0.628303510868405,0.434589487688032,0.31900115973192,0.0915975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| ||
|short_description=p4@NCOA1 | |short_description=p4@NCOA1 | ||
}} | }} |
Latest revision as of 13:08, 16 September 2015
Short description: | p4@NCOA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NCOA1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -160bp_to_ENST00000486198_5end |
EntrezGene: | NCOA1 |
HGNC: | 7668 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 9.43e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.65e-22 | 22 |
cerebral cortex | 3.39e-19 | 25 |
pallium | 3.39e-19 | 25 |
brain grey matter | 1.71e-18 | 34 |
gray matter | 1.71e-18 | 34 |
regional part of telencephalon | 3.98e-17 | 32 |
cerebral hemisphere | 3.98e-17 | 32 |
neocortex | 6.38e-17 | 20 |
regional part of nervous system | 1.87e-16 | 53 |
regional part of brain | 1.87e-16 | 53 |
telencephalon | 5.64e-16 | 34 |
neural tube | 2.26e-15 | 56 |
neural rod | 2.26e-15 | 56 |
future spinal cord | 2.26e-15 | 56 |
neural keel | 2.26e-15 | 56 |
temporal lobe | 1.50e-13 | 6 |
regional part of forebrain | 8.14e-13 | 41 |
forebrain | 8.14e-13 | 41 |
anterior neural tube | 8.14e-13 | 41 |
future forebrain | 8.14e-13 | 41 |
brain | 9.16e-12 | 68 |
future brain | 9.16e-12 | 68 |
neural plate | 1.29e-10 | 82 |
presumptive neural plate | 1.29e-10 | 82 |
central nervous system | 1.36e-10 | 81 |
neurectoderm | 6.18e-10 | 86 |
nervous system | 3.75e-09 | 89 |
pre-chordal neural plate | 4.07e-09 | 61 |
middle temporal gyrus | 1.18e-08 | 2 |
Ammon's horn | 1.18e-08 | 2 |
lobe parts of cerebral cortex | 1.18e-08 | 2 |
hippocampal formation | 1.18e-08 | 2 |
limbic lobe | 1.18e-08 | 2 |
ecto-epithelium | 1.39e-08 | 104 |
limbic system | 1.75e-07 | 5 |