FFCP PHASE1:Hg19::chr14:52195978..52195992,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:52195978..52195992,+
|short_description=p@chr14:52195978..52195992,+
|description=CAGE_peak_at_chr14:52195978..52195992,+
|association_with_transcript=NA
...") |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:52195978..52195992,+ | |||
|description=CAGE_peak_at_chr14:52195978..52195992,+ | |||
|id=chr14:52195978..52195992,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.16e-15!75;CL:0000055!1.02e-13!180;CL:0002620!3.20e-09!23;CL:0002334!5.16e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002539;7.06e-08;10!CL:0002617;1.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.86e-10,76;CL:0002539,4.79e-08,10;CL:0002617,1.28e-07,2;CL:0002570,8.48e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.32e-11;3!DOID:127;5.32e-11;3!DOID:0060072;2.42e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.71e-11,3;DOID:127,6.71e-11,3;DOID:0060072,2.87e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.57e-12!95;UBERON:0002097!2.25e-08!40;UBERON:0002199!4.18e-08!45;UBERON:0002416!4.18e-08!45;UBERON:0000161!9.45e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;7.06e-08;10!UBERON:0004695;7.06e-08;10!UBERON:0002111;7.06e-08;10!UBERON:0004178;7.06e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,4.79e-08,10;UBERON:0004695,4.79e-08,10;UBERON:0002111,4.79e-08,10;UBERON:0004178,4.79e-08,10 | |||
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| ||
|short_description=p@chr14:52195978..52195992,+ | |||
}} | }} |
Latest revision as of 21:01, 24 July 2015
Short description: | p@chr14:52195978..52195992, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:52195978..52195992, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.86e-10 | 76 |
aortic smooth muscle cell | 4.79e-08 | 10 |
adipocyte of breast | 1.28e-07 | 2 |
mesenchymal stem cell of adipose | 8.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 4.79e-08 | 10 |
arterial system smooth muscle | 4.79e-08 | 10 |
artery smooth muscle tissue | 4.79e-08 | 10 |
aorta smooth muscle tissue | 4.79e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.71e-11 | 3 |
leiomyoma | 6.71e-11 | 3 |
benign neoplasm | 2.87e-08 | 4 |