FFCP PHASE1:Hg19::chr9:123163075..123163103,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55755 | |EntrezGene=55755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18672 | |HGNC=18672 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=193bp_to_ENST00000474262_5end | |association_with_transcript=193bp_to_ENST00000474262_5end | ||
|cluster_id=chr9:123163075..123163103,- | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_17_at_CDK5RAP2_5end | |description=CAGE_peak_17_at_CDK5RAP2_5end | ||
|id=chr9:123163075..123163103,- | |id=chr9:123163075..123163103,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.66e-18;1!CL:0000228;8.72e-18;1!CL:0002372;8.72e-18;1!CL:0002591;8.72e-18;1!CL:0000056;2.02e-17;4!CL:0000235;4.55e-12;6!CL:0000680;2.24e-10;7!CL:0000159;7.97e-10;2!CL:0000346;8.62e-07;3!CL:1000428;8.62e-07;3!CL:0000515;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.66e-18,1;CL:0000228,6.23e-18,1;CL:0002372,6.23e-18,1;CL:0000515,1.33e-17,4;CL:0002591,1.44e-17,1;CL:0000235,4.81e-12,6;CL:0000159,7.98e-10,2;CL:0000346,8.15e-07,3;CL:1000428,8.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;2.02e-17;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.66e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.66e-18,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;8.72e-18;1!UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2!UBERON:0000412;8.62e-07;3!UBERON:0001992;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.70e-17,1;UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2;UBERON:0000412,8.15e-07,3;UBERON:0001992,8.15e-07,3 | |||
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| ||
|short_description=p17@CDK5RAP2 | |short_description=p17@CDK5RAP2 | ||
}} | }} |
Latest revision as of 19:09, 24 September 2015
Short description: | p17@CDK5RAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CDK5RAP2_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 193bp_to_ENST00000474262_5end |
EntrezGene: | CDK5RAP2 |
HGNC: | 18672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.66e-18 | 1 |
multinucleate cell | 6.23e-18 | 1 |
myotube | 6.23e-18 | 1 |
skeletal muscle myoblast | 1.33e-17 | 4 |
smooth muscle cell of the pulmonary artery | 1.44e-17 | 1 |
macrophage | 4.81e-12 | 6 |
seromucus secreting cell | 7.98e-10 | 2 |
hair follicle dermal papilla cell | 8.15e-07 | 3 |
stem cell of epidermis | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.70e-17 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.86e-09 | 2 |
developing epithelial placode | 1.86e-09 | 2 |
respiratory system arterial blood vessel | 1.86e-09 | 2 |
respiratory system blood vessel | 1.86e-09 | 2 |
respiratory system artery | 1.86e-09 | 2 |
head blood vessel | 1.86e-09 | 2 |
pulmonary artery | 1.86e-09 | 2 |
pulmonary vascular system | 1.86e-09 | 2 |
pharyngeal vasculature | 1.86e-09 | 2 |
truncus arteriosus | 1.86e-09 | 2 |
aortic sac | 1.86e-09 | 2 |
pharyngeal arch artery | 1.86e-09 | 2 |
dermal papilla | 8.15e-07 | 3 |
papillary layer of dermis | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.66e-18 | 1 |