FFCP PHASE1:Hg19::chr9:117881337..117881348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:117881337..117881348,- | |||
|description=CAGE_peak_at_chr9:117881337..117881348,- | |description=CAGE_peak_at_chr9:117881337..117881348,- | ||
|id=chr9:117881337..117881348,- | |id=chr9:117881337..117881348,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.70e-40;1!CL:0000159;6.30e-21;2!CL:0002253;6.30e-21;2!CL:0000322;1.31e-14;3!CL:0002563;3.60e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.21e-40,1;CL:0000159,5.70e-21,2;CL:0002253,6.96e-21,2;CL:0000322,1.40e-14,3;CL:0002563,3.79e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.70e-40;1!DOID:3910;3.44e-21;2!DOID:3908;2.63e-09;5!DOID:299;2.58e-07;25!DOID:1325;5.23e-07;7!DOID:3904;5.23e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.21e-40,1;DOID:3910,3.81e-21,2;DOID:3908,2.74e-09,5;DOID:299,2.58e-07,25;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.44e-21;2!UBERON:0002173;3.44e-21;2!UBERON:0002186;3.44e-21;2!UBERON:0004821;1.31e-14;3!UBERON:0007499;1.31e-14;3!UBERON:0003215;1.31e-14;3!UBERON:0010368;1.31e-14;3!UBERON:0009911;1.31e-14;3!UBERON:0002299;1.31e-14;3!UBERON:0006524;1.31e-14;3!UBERON:0008874;1.31e-14;3!UBERON:0002169;1.31e-14;3!UBERON:0004894;1.31e-14;3!UBERON:0002346;2.66e-11;4!UBERON:0000923;2.66e-11;4!UBERON:0010316;2.66e-11;4!UBERON:0005291;2.66e-11;4!UBERON:0009856;2.66e-11;4!UBERON:0001052;3.60e-11;4!UBERON:0001242;3.60e-11;4!UBERON:0001262;3.60e-11;4!UBERON:0004786;3.60e-11;4!UBERON:0004808;3.60e-11;4!UBERON:0001277;3.60e-11;4!UBERON:0002050;2.63e-09;5!UBERON:0005423;2.63e-09;5!UBERON:0004907;3.35e-09;5!UBERON:0000485;6.21e-07;7!UBERON:0003929;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3;UBERON:0001052,3.79e-11,4;UBERON:0001242,3.79e-11,4;UBERON:0001262,3.79e-11,4;UBERON:0004786,3.79e-11,4;UBERON:0004808,3.79e-11,4;UBERON:0001277,3.79e-11,4;UBERON:0004907,3.49e-09,5 | |||
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| ||
|short_description=p@chr9:117881337..117881348,- | |short_description=p@chr9:117881337..117881348,- | ||
}} | }} |
Latest revision as of 22:09, 31 July 2015
Short description: | p@chr9:117881337..117881348, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:117881337..117881348, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.21e-40 | 1 |
seromucus secreting cell | 5.70e-21 | 2 |
epithelial cell of large intestine | 6.96e-21 | 2 |
pneumocyte | 1.40e-14 | 3 |
intestinal epithelial cell | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.81e-21 | 2 |
alveolar duct | 3.81e-21 | 2 |
bronchiole | 3.81e-21 | 2 |
pulmonary alveolus epithelium | 1.40e-14 | 3 |
alveolus | 1.40e-14 | 3 |
pulmonary lobule | 1.40e-14 | 3 |
lobule | 1.40e-14 | 3 |
alveolus of lung | 1.40e-14 | 3 |
alveolar system | 1.40e-14 | 3 |
pulmonary acinus | 1.40e-14 | 3 |
alveolar sac | 1.40e-14 | 3 |
alveolar wall | 1.40e-14 | 3 |
rectum | 3.79e-11 | 4 |
intestinal mucosa | 3.79e-11 | 4 |
wall of intestine | 3.79e-11 | 4 |
gastrointestinal system mucosa | 3.79e-11 | 4 |
gastrointestinal system epithelium | 3.79e-11 | 4 |
intestinal epithelium | 3.79e-11 | 4 |
lower digestive tract | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.21e-40 | 1 |
lung adenocarcinoma | 3.81e-21 | 2 |
non-small cell lung carcinoma | 2.74e-09 | 5 |
adenocarcinoma | 2.58e-07 | 25 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |