FFCP PHASE1:Hg19::chr2:239197379..239197398,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8864 | |EntrezGene=8864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8846 | |HGNC=8846 | ||
|TSSclassifier=strong | |||
|UniProt=O15055 | |UniProt=O15055 | ||
|association_with_transcript=-129bp_to_ENST00000254657_5end | |association_with_transcript=-129bp_to_ENST00000254657_5end | ||
|cluster_id=chr2:239197379..239197398,- | |||
|description=CAGE_peak_2_at_PER2_5end | |description=CAGE_peak_2_at_PER2_5end | ||
|id=chr2:239197379..239197398,- | |id=chr2:239197379..239197398,- | ||
|ontology_enrichment_celltype=CL:0002057!1.59e-08!42;CL:0000557!1.00e-07!71;CL:0000860!2.76e-07!45;CL:0000738!3.45e-07!140 | |ontology_enrichment_celltype=CL:0002057!1.59e-08!42;CL:0000557!1.00e-07!71;CL:0000860!2.76e-07!45;CL:0000738!3.45e-07!140 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.64e-08,136;CL:0000557,1.27e-07,67;CL:0000860,3.45e-07,42;CL:0002057,3.45e-07,42;CL:0000766,3.47e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.86e-13!115 | |ontology_enrichment_uberon=UBERON:0007023!1.86e-13!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.89e-07,114;UBERON:0001474,2.02e-07,82 | |||
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| ||
|short_description=p2@PER2 | |short_description=p2@PER2 | ||
}} | }} |
Latest revision as of 05:46, 16 September 2015
Short description: | p2@PER2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PER2_5end |
Coexpression cluster: | NA |
Association with transcript: | -129bp_to_ENST00000254657_5end |
EntrezGene: | PER2 |
HGNC: | 8846 |
UniProt: | O15055 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.64e-08 | 136 |
granulocyte monocyte progenitor cell | 1.27e-07 | 67 |
classical monocyte | 3.45e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.45e-07 | 42 |
myeloid leukocyte | 3.47e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.89e-07 | 114 |
bone element | 2.02e-07 | 82 |