FFCP PHASE1:Hg19::chr2:238596652..238596664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238596652..238596664,+ | |||
|coexpression_cluster_id=C1621 | |||
|description=CAGE_peak_at_chr2:238596652..238596664,+ | |description=CAGE_peak_at_chr2:238596652..238596664,+ | ||
|id=chr2:238596652..238596664,+ | |id=chr2:238596652..238596664,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.44e-49!42;CL:0000860!1.23e-44!45;CL:0000738!3.24e-39!140;CL:0000766!9.65e-36!76;CL:0002087!8.00e-32!119;CL:0002031!2.13e-31!124;CL:0000557!5.11e-31!71;CL:0000839!5.91e-30!70;CL:0002009!2.13e-29!65;CL:0002194!5.59e-29!63;CL:0000576!5.59e-29!63;CL:0000040!5.59e-29!63;CL:0000559!5.59e-29!63;CL:0000037!6.83e-29!172;CL:0000566!6.83e-29!172;CL:0002032!1.83e-26!165;CL:0000837!1.83e-26!165;CL:0000988!3.99e-26!182;CL:0000763!1.33e-22!112;CL:0000049!1.33e-22!112;CL:0000134!5.64e-16!358;CL:0002320!9.44e-16!365;CL:0002393!1.05e-15!9;CL:0002397!1.05e-15!9;CL:0000219!2.01e-12!390;CL:0000048!3.92e-11!430;CL:0000723!4.34e-11!436;CL:0000034!5.29e-11!444;CL:0000624!1.10e-09!6;CL:0000791!3.34e-07!18;CL:0000789!3.34e-07!18;CL:0002420!3.34e-07!18;CL:0002419!3.34e-07!18;CL:0000790!3.34e-07!18 | |ontology_enrichment_celltype=CL:0002057!8.44e-49!42;CL:0000860!1.23e-44!45;CL:0000738!3.24e-39!140;CL:0000766!9.65e-36!76;CL:0002087!8.00e-32!119;CL:0002031!2.13e-31!124;CL:0000557!5.11e-31!71;CL:0000839!5.91e-30!70;CL:0002009!2.13e-29!65;CL:0002194!5.59e-29!63;CL:0000576!5.59e-29!63;CL:0000040!5.59e-29!63;CL:0000559!5.59e-29!63;CL:0000037!6.83e-29!172;CL:0000566!6.83e-29!172;CL:0002032!1.83e-26!165;CL:0000837!1.83e-26!165;CL:0000988!3.99e-26!182;CL:0000763!1.33e-22!112;CL:0000049!1.33e-22!112;CL:0000134!5.64e-16!358;CL:0002320!9.44e-16!365;CL:0002393!1.05e-15!9;CL:0002397!1.05e-15!9;CL:0000219!2.01e-12!390;CL:0000048!3.92e-11!430;CL:0000723!4.34e-11!436;CL:0000034!5.29e-11!444;CL:0000624!1.10e-09!6;CL:0000791!3.34e-07!18;CL:0000789!3.34e-07!18;CL:0002420!3.34e-07!18;CL:0002419!3.34e-07!18;CL:0000790!3.34e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002393;4.51e-28;6!CL:0002397;4.51e-28;6!CL:0000576;1.84e-26;48!CL:0000860;5.96e-22;33!CL:0002057;5.96e-22;33!CL:0000766;8.52e-22;69!CL:0000767;4.82e-16;3!CL:0000473;1.04e-15;39!CL:0000234;1.04e-15;39!CL:0000623;9.84e-15;3!CL:0002087;3.47e-11;104!CL:0000094;2.06e-10;8!CL:0000738;2.93e-09;136!CL:0000763;1.41e-07;100!CL:0000081;1.42e-07;11!CL:0000875;1.53e-07;3!CL:0002396;1.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.02e-49,42;CL:0002057,4.02e-49,42;CL:0000738,1.63e-42,136;CL:0000473,2.46e-42,48;CL:0000234,2.46e-42,48;CL:0000766,2.04e-41,72;CL:0002087,4.15e-37,115;CL:0002031,3.33e-35,120;CL:0002393,2.20e-33,9;CL:0002397,2.20e-33,9;CL:0000037,5.13e-33,168;CL:0002194,7.79e-33,59;CL:0000576,7.79e-33,59;CL:0000040,7.79e-33,59;CL:0000559,7.79e-33,59;CL:0002032,1.35e-32,161;CL:0000837,1.35e-32,161;CL:0000839,8.74e-32,66;CL:0002009,1.31e-31,61;CL:0000557,3.07e-31,67;CL:0000988,5.86e-31,177;CL:0000763,1.10e-25,108;CL:0000049,1.10e-25,108;CL:0000767,5.10e-16,3;CL:0000623,5.75e-15,3;CL:0000825,5.75e-15,3;CL:0000134,1.24e-11,354;CL:0002320,2.96e-11,361;CL:0000094,2.07e-10,8;CL:0000219,6.33e-10,386;CL:0000034,1.61e-08,441;CL:0000048,2.68e-08,427;CL:0000723,4.50e-08,433;CL:0000081,1.43e-07,11;CL:0000875,1.63e-07,3;CL:0002396,1.63e-07,3;CL:0000838,3.88e-07,52;CL:0000542,5.70e-07,53;CL:0000051,5.70e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.65e-32;42!CL:0000049;6.44e-07;108 | |||
|ontology_enrichment_disease=DOID:2394!7.17e-07!14 | |ontology_enrichment_disease=DOID:2394!7.17e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.39e-29!80;UBERON:0002390!1.61e-28!102;UBERON:0003061!1.61e-28!102;UBERON:0001474!9.37e-26!86;UBERON:0002193!1.38e-25!112;UBERON:0004765!7.30e-20!101;UBERON:0001434!7.30e-20!101;UBERON:0002405!1.02e-17!115;UBERON:0002384!3.01e-15!375;UBERON:0003081!2.57e-10!216;UBERON:0002204!2.52e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.85e-27,76;UBERON:0001474,1.27e-24,82;UBERON:0002390,6.58e-24,98;UBERON:0003061,6.58e-24,98;UBERON:0002405,3.48e-23,93;UBERON:0004765,5.47e-22,90;UBERON:0002193,3.47e-21,108;UBERON:0001434,2.76e-19,100;UBERON:0002384,9.68e-11,371;UBERON:0002204,1.59e-09,167;UBERON:0003081,1.04e-08,203 | |||
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|short_description=p@chr2:238596652..238596664,+ | |short_description=p@chr2:238596652..238596664,+ | ||
}} | }} |
Latest revision as of 08:15, 29 July 2015
Short description: | p@chr2:238596652..238596664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238596652..238596664, + |
Coexpression cluster: | C1621_Basophils_CD14CD16_CD14_CD4_CD34_Natural_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.85e-27 | 76 |
bone element | 1.27e-24 | 82 |
hematopoietic system | 6.58e-24 | 98 |
blood island | 6.58e-24 | 98 |
immune system | 3.48e-23 | 93 |
skeletal element | 5.47e-22 | 90 |
hemolymphoid system | 3.47e-21 | 108 |
skeletal system | 2.76e-19 | 100 |
connective tissue | 9.68e-11 | 371 |
musculoskeletal system | 1.59e-09 | 167 |
lateral plate mesoderm | 1.04e-08 | 203 |