FFCP PHASE1:Hg19::chr14:50360356..50360379,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:50360356..50360379,+
|short_description=p10@ARF6
|description=CAGE_peak_10_at_ARF6_5end
|association_with_transcript=-8bp_to_AF047432_5end
|EntrezGene=38...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=382 | |EntrezGene=382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=659 | |HGNC=659 | ||
|TSSclassifier=strong | |||
|UniProt=P62330 | |UniProt=P62330 | ||
|association_with_transcript=-8bp_to_AF047432_5end | |||
|cluster_id=chr14:50360356..50360379,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_10_at_ARF6_5end | |||
|id=chr14:50360356..50360379,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.78e-29!42;CL:0000738!1.84e-28!140;CL:0000860!5.03e-27!45;CL:0002031!8.85e-27!124;CL:0002087!2.06e-25!119;CL:0000557!3.22e-23!71;CL:0002009!2.85e-22!65;CL:0000839!3.29e-22!70;CL:0002194!2.86e-21!63;CL:0000576!2.86e-21!63;CL:0000040!2.86e-21!63;CL:0000559!2.86e-21!63;CL:0000988!4.00e-21!182;CL:0000766!4.16e-21!76;CL:0000037!5.28e-19!172;CL:0000566!5.28e-19!172;CL:0002032!1.47e-17!165;CL:0000837!1.47e-17!165;CL:0000763!1.36e-12!112;CL:0000049!1.36e-12!112;CL:0000134!4.12e-08!358;CL:0002320!7.73e-08!365;CL:0002393!1.25e-07!9;CL:0002397!1.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.38e-53;33!CL:0002057;4.38e-53;33!CL:0000576;1.24e-40;48!CL:0000473;5.95e-36;39!CL:0000234;5.95e-36;39!CL:0000766;4.09e-27;69!CL:0002087;3.66e-14;104!CL:0002393;3.51e-13;6!CL:0002397;3.51e-13;6!CL:0000738;3.16e-11;136!CL:0000763;2.08e-10;100!CL:0000875;1.86e-08;3!CL:0002396;1.86e-08;3!CL:0000767;1.28e-07;3!CL:0000988;3.86e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-77,42;CL:0002057,1.02e-77,42;CL:0000473,2.00e-66,48;CL:0000234,2.00e-66,48;CL:0000766,4.56e-52,72;CL:0002009,2.52e-51,61;CL:0000557,3.81e-51,67;CL:0002194,1.22e-50,59;CL:0000576,1.22e-50,59;CL:0000040,1.22e-50,59;CL:0000559,1.22e-50,59;CL:0000839,1.84e-49,66;CL:0000738,1.88e-43,136;CL:0002031,3.51e-38,120;CL:0002087,3.52e-38,115;CL:0000988,2.91e-36,177;CL:0000763,1.85e-35,108;CL:0000049,1.85e-35,108;CL:0000037,4.55e-32,168;CL:0002032,1.74e-31,161;CL:0000837,1.74e-31,161;CL:0002393,4.36e-20,9;CL:0002397,4.36e-20,9;CL:0000134,3.51e-12,354;CL:0002320,1.27e-11,361;CL:0000219,1.14e-09,386;CL:0000048,9.08e-09,427;CL:0000034,1.71e-08,441;CL:0000875,1.85e-08,3;CL:0002396,1.85e-08,3;CL:0000723,2.04e-08,433;CL:0000767,1.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.42e-56;42!CL:0000049;4.10e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.43e-46,76;UBERON:0001474,7.26e-46,82;UBERON:0002390,4.12e-42,98;UBERON:0003061,4.12e-42,98;UBERON:0004765,1.27e-40,90;UBERON:0002193,6.31e-37,108;UBERON:0002405,2.82e-35,93;UBERON:0001434,3.01e-35,100;UBERON:0002204,8.22e-19,167;UBERON:0003081,1.65e-17,203;UBERON:0002384,3.70e-12,371;UBERON:0000926,3.60e-09,315;UBERON:0004120,3.60e-09,315;UBERON:0006603,3.60e-09,315 | |||
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| ||
|short_description=p10@ARF6 | |||
}} | }} |
Latest revision as of 02:43, 20 September 2015
Short description: | p10@ARF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARF6_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -8bp_to_AF047432_5end |
EntrezGene: | ARF6 |
HGNC: | 659 |
UniProt: | P62330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.43e-46 | 76 |
bone element | 7.26e-46 | 82 |
hematopoietic system | 4.12e-42 | 98 |
blood island | 4.12e-42 | 98 |
skeletal element | 1.27e-40 | 90 |
hemolymphoid system | 6.31e-37 | 108 |
immune system | 2.82e-35 | 93 |
skeletal system | 3.01e-35 | 100 |
musculoskeletal system | 8.22e-19 | 167 |
lateral plate mesoderm | 1.65e-17 | 203 |
connective tissue | 3.70e-12 | 371 |
mesoderm | 3.60e-09 | 315 |
mesoderm-derived structure | 3.60e-09 | 315 |
presumptive mesoderm | 3.60e-09 | 315 |