FFCP PHASE1:Hg19::chr9:113800705..113800781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1902 | |EntrezGene=1902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |HGNC=3166 | ||
|TSSclassifier=strong | |||
|UniProt=B1AP63 | |UniProt=B1AP63 | ||
|association_with_transcript=0bp_to_ENST00000441240_5end | |association_with_transcript=0bp_to_ENST00000441240_5end | ||
|cluster_id=chr9:113800705..113800781,- | |||
|coexpression_cluster_id=C2016 | |||
|description=CAGE_peak_1_at_LPAR1_5end | |description=CAGE_peak_1_at_LPAR1_5end | ||
|id=chr9:113800705..113800781,- | |id=chr9:113800705..113800781,- | ||
|ontology_enrichment_celltype=CL:0000055!1.46e-24!180;CL:0000057!5.43e-17!75;CL:0000680!2.99e-13!57;CL:0000056!2.99e-13!57;CL:0000355!2.99e-13!57;CL:0000187!4.00e-12!54;CL:0000183!1.35e-11!59;CL:0000192!4.58e-10!42;CL:0000514!4.58e-10!42;CL:0000393!1.63e-09!60;CL:0000211!1.63e-09!60;CL:0000359!6.56e-07!32 | |ontology_enrichment_celltype=CL:0000055!1.46e-24!180;CL:0000057!5.43e-17!75;CL:0000680!2.99e-13!57;CL:0000056!2.99e-13!57;CL:0000355!2.99e-13!57;CL:0000187!4.00e-12!54;CL:0000183!1.35e-11!59;CL:0000192!4.58e-10!42;CL:0000514!4.58e-10!42;CL:0000393!1.63e-09!60;CL:0000211!1.63e-09!60;CL:0000359!6.56e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000192;6.27e-08;43!CL:0000187;1.73e-07;55!CL:0000057;6.88e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.26e-17,76;CL:0000680,6.82e-14,58;CL:0000056,6.82e-14,58;CL:0000355,6.82e-14,58;CL:0000187,9.67e-13,55;CL:0000192,1.20e-10,43;CL:0000514,1.20e-10,43;CL:0000393,8.57e-10,61;CL:0000211,8.57e-10,61;CL:0000359,5.39e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.27e-08;43!CL:0000355;7.86e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.91e-29!365;UBERON:0000468!3.87e-22!659;UBERON:0000914!3.34e-19!83;UBERON:0002329!3.34e-19!83;UBERON:0003077!3.34e-19!83;UBERON:0003059!3.34e-19!83;UBERON:0007282!3.34e-19!83;UBERON:0009618!3.34e-19!83;UBERON:0007285!3.34e-19!83;UBERON:0000481!9.81e-19!347;UBERON:0000467!1.34e-17!625;UBERON:0000480!2.96e-17!626;UBERON:0007023!3.83e-17!115;UBERON:0001049!5.32e-17!57;UBERON:0005068!5.32e-17!57;UBERON:0006241!5.32e-17!57;UBERON:0007135!5.32e-17!57;UBERON:0002616!5.35e-17!59;UBERON:0000033!2.46e-16!123;UBERON:0002050!3.18e-16!605;UBERON:0005423!3.18e-16!605;UBERON:0000955!4.33e-16!69;UBERON:0006238!4.33e-16!69;UBERON:0000923!4.36e-16!604;UBERON:0005291!4.36e-16!604;UBERON:0006598!4.36e-16!604;UBERON:0002532!4.36e-16!604;UBERON:0000922!5.60e-16!612;UBERON:0000486!3.51e-15!82;UBERON:0001017!4.36e-15!82;UBERON:0000153!4.97e-15!129;UBERON:0007811!4.97e-15!129;UBERON:0004290!5.56e-15!70;UBERON:0000062!1.94e-14!511;UBERON:0005743!5.31e-14!86;UBERON:0000119!9.40e-14!312;UBERON:0000073!1.12e-13!94;UBERON:0001016!1.12e-13!94;UBERON:0002385!1.23e-13!63;UBERON:0001015!1.23e-13!63;UBERON:0000383!1.23e-13!63;UBERON:0000483!1.70e-13!309;UBERON:0001134!1.94e-13!61;UBERON:0002036!1.94e-13!61;UBERON:0003082!1.94e-13!61;UBERON:0000479!2.36e-13!787;UBERON:0004121!5.50e-13!169;UBERON:0003080!6.38e-13!42;UBERON:0003075!7.02e-13!86;UBERON:0007284!7.02e-13!86;UBERON:0002780!1.05e-12!41;UBERON:0001890!1.05e-12!41;UBERON:0006240!1.05e-12!41;UBERON:0000924!1.36e-12!173;UBERON:0006601!1.36e-12!173;UBERON:0002346!3.46e-12!90;UBERON:0001893!5.52e-12!34;UBERON:0002020!7.31e-12!34;UBERON:0003528!7.31e-12!34;UBERON:0005256!8.14e-12!143;UBERON:0002791!1.83e-11!33;UBERON:0003102!2.14e-11!95;UBERON:0000477!2.56e-11!286;UBERON:0001869!8.40e-11!32;UBERON:0002100!4.05e-10!216;UBERON:0004111!2.80e-09!241;UBERON:0003056!8.79e-09!61;UBERON:0002619!9.56e-09!22;UBERON:0001950!5.62e-08!20;UBERON:0000956!1.32e-07!25;UBERON:0000203!1.32e-07!25;UBERON:0000025!5.10e-07!194;UBERON:0002204!5.23e-07!167;UBERON:0000064!6.03e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.64e-10;34!UBERON:0003528;3.48e-10;34!UBERON:0002020;3.48e-10;34!UBERON:0002791;6.67e-10;32!UBERON:0001869;7.05e-10;32!UBERON:0002780;1.04e-09;41!UBERON:0001890;1.04e-09;41!UBERON:0000073;4.09e-09;53!UBERON:0002616;4.09e-09;53!UBERON:0002619;7.60e-09;22!UBERON:0001017;4.50e-08;75!UBERON:0001950;4.66e-08;20!UBERON:0000956;1.01e-07;25!UBERON:0000203;1.01e-07;25!UBERON:0002204;2.11e-07;70!UBERON:0000075;2.49e-07;16!UBERON:0000955;3.37e-07;68!UBERON:0002385;4.24e-07;31!UBERON:0001015;4.24e-07;31!UBERON:0000383;4.24e-07;31 | |||
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| ||
|short_description=p1@LPAR1 | |short_description=p1@LPAR1 | ||
}} | }} |
Latest revision as of 04:01, 20 September 2015
Short description: | p1@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPAR1_5end |
Coexpression cluster: | C2016_Fibroblast_corpus_Nucleus_Anulus_globus_tridermal_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000441240_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | B1AP63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.26e-17 | 76 |
muscle precursor cell | 6.82e-14 | 58 |
myoblast | 6.82e-14 | 58 |
multi-potent skeletal muscle stem cell | 6.82e-14 | 58 |
muscle cell | 9.67e-13 | 55 |
smooth muscle cell | 1.20e-10 | 43 |
smooth muscle myoblast | 1.20e-10 | 43 |
electrically responsive cell | 8.57e-10 | 61 |
electrically active cell | 8.57e-10 | 61 |
vascular associated smooth muscle cell | 5.39e-07 | 32 |