FFCP PHASE1:Hg19::chr2:233385094..233385099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646960 | |EntrezGene=646960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=39433 | |HGNC=39433 | ||
|TSSclassifier=strong | |||
|UniProt=P0CW18 | |UniProt=P0CW18 | ||
|association_with_transcript=-73bp_to_NM_001195129_5end | |association_with_transcript=-73bp_to_NM_001195129_5end | ||
|cluster_id=chr2:233385094..233385099,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_3_at_PRSS56_5end | |description=CAGE_peak_3_at_PRSS56_5end | ||
|id=chr2:233385094..233385099,+ | |id=chr2:233385094..233385099,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.12e-11!5;CL:0000066!3.15e-07!254 | |ontology_enrichment_celltype=CL:0002322!1.12e-11!5;CL:0000066!3.15e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.29e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.17e-17;29 | |||
|ontology_enrichment_disease=DOID:305!2.96e-13!106;DOID:0050687!3.45e-10!143;DOID:1325!2.24e-08!7;DOID:3904!2.24e-08!7;DOID:162!3.68e-07!235;DOID:14566!6.34e-07!239;DOID:5409!8.19e-07!4 | |ontology_enrichment_disease=DOID:305!2.96e-13!106;DOID:0050687!3.45e-10!143;DOID:1325!2.24e-08!7;DOID:3904!2.24e-08!7;DOID:162!3.68e-07!235;DOID:14566!6.34e-07!239;DOID:5409!8.19e-07!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.32e-10,106;DOID:0050687,3.65e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.75e-54!9;UBERON:0001557!8.26e-37!19;UBERON:0000072!4.23e-23!46;UBERON:0008947!5.20e-21!38;UBERON:0003258!5.20e-21!38;UBERON:0000065!1.12e-19!53;UBERON:0000063!1.05e-14!97;UBERON:0001004!9.68e-14!72;UBERON:0001041!1.72e-12!98;UBERON:0000077!5.64e-10!130;UBERON:0004921!5.64e-10!129;UBERON:0004185!5.64e-10!129;UBERON:0001048!4.59e-09!168;UBERON:0001007!9.58e-08!155;UBERON:0001555!9.58e-08!155;UBERON:0007026!9.58e-08!155;UBERON:0001301!3.40e-07!1;UBERON:0004119!7.84e-07!169;UBERON:0000925!7.84e-07!169;UBERON:0006595!7.84e-07!169 | |ontology_enrichment_uberon=UBERON:0001737!2.75e-54!9;UBERON:0001557!8.26e-37!19;UBERON:0000072!4.23e-23!46;UBERON:0008947!5.20e-21!38;UBERON:0003258!5.20e-21!38;UBERON:0000065!1.12e-19!53;UBERON:0000063!1.05e-14!97;UBERON:0001004!9.68e-14!72;UBERON:0001041!1.72e-12!98;UBERON:0000077!5.64e-10!130;UBERON:0004921!5.64e-10!129;UBERON:0004185!5.64e-10!129;UBERON:0001048!4.59e-09!168;UBERON:0001007!9.58e-08!155;UBERON:0001555!9.58e-08!155;UBERON:0007026!9.58e-08!155;UBERON:0001301!3.40e-07!1;UBERON:0004119!7.84e-07!169;UBERON:0000925!7.84e-07!169;UBERON:0006595!7.84e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.15e-39;9!UBERON:0001557;9.15e-39;9!UBERON:0000065;1.95e-12;44!UBERON:0000072;3.99e-12;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.46e-39,9;UBERON:0001557,1.84e-18,19;UBERON:0008947,4.19e-13,38;UBERON:0003258,4.19e-13,38;UBERON:0000072,1.52e-10,47;UBERON:0000065,3.84e-09,54 | |||
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|short_description=p3@PRSS56 | |short_description=p3@PRSS56 | ||
}} | }} |
Latest revision as of 21:42, 15 September 2015
Short description: | p3@PRSS56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRSS56_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -73bp_to_NM_001195129_5end |
EntrezGene: | PRSS56 |
HGNC: | 39433 |
UniProt: | P0CW18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.46e-39 | 9 |
upper respiratory tract | 1.84e-18 | 19 |
respiratory primordium | 4.19e-13 | 38 |
endoderm of foregut | 4.19e-13 | 38 |
segment of respiratory tract | 1.52e-10 | 47 |
respiratory tract | 3.84e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.32e-10 | 106 |
cell type cancer | 3.65e-07 | 143 |