FFCP PHASE1:Hg19::chr14:36989573..36989577,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:36989573..36989577,-
|short_description=p18@NKX2-1
|description=CAGE_peak_18_at_NKX2-1_5end
|association_with_transcript=-140bp_to_ENST00000354822_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt=P43699 | |UniProt=P43699 | ||
|association_with_transcript=-140bp_to_ENST00000354822_5end | |||
|cluster_id=chr14:36989573..36989577,- | |||
|coexpression_cluster_id=C1393 | |||
|description=CAGE_peak_18_at_NKX2-1_5end | |||
|id=chr14:36989573..36989577,- | |||
|ontology_enrichment_celltype=CL:0000082!4.07e-09!19;CL:0002553!1.13e-08!1;CL:1001319!7.16e-08!1;CL:1000600!7.16e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;4.27e-34;1!CL:0000322;2.45e-12;3!CL:0000082;5.93e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.61e-34,1;CL:0000322,3.24e-12,3;CL:0000082,6.36e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.35e-19;29!UBERON:0001041;3.74e-18;30!UBERON:0007123;6.33e-08;5 | |||
|ontology_enrichment_disease=DOID:3905!1.21e-12!9;DOID:1324!1.32e-11!15;DOID:0050615!7.24e-11!16;DOID:1325!1.49e-09!7;DOID:3904!1.49e-09!7;DOID:3112!2.69e-08!1;DOID:5409!8.25e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:3910;8.34e-18;2!DOID:1324;8.10e-10;15!DOID:0050615;2.89e-09;16!DOID:3908;6.33e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.27e-17,2;DOID:1324,8.85e-10,15;DOID:0050615,3.14e-09,16;DOID:3908,7.49e-08,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002171;4.27e-34;1!UBERON:0006518;4.27e-34;1!UBERON:0008949;4.27e-34;1!UBERON:0000101;4.27e-34;1!UBERON:0002167;4.27e-34;1!UBERON:0002048;1.71e-24;22!UBERON:0000117;1.71e-24;22!UBERON:0000171;1.71e-24;22!UBERON:0000170;1.71e-24;22!UBERON:0004903;8.34e-18;2!UBERON:0002173;8.34e-18;2!UBERON:0002186;8.34e-18;2!UBERON:0005178;6.51e-13;34!UBERON:0002224;6.51e-13;34!UBERON:0004821;2.45e-12;3!UBERON:0007499;2.45e-12;3!UBERON:0003215;2.45e-12;3!UBERON:0010368;2.45e-12;3!UBERON:0009911;2.45e-12;3!UBERON:0002299;2.45e-12;3!UBERON:0006524;2.45e-12;3!UBERON:0008874;2.45e-12;3!UBERON:0002169;2.45e-12;3!UBERON:0004894;2.45e-12;3!UBERON:0005181;4.54e-12;35!UBERON:0000065;1.01e-09;44!UBERON:0009856;1.38e-09;4!UBERON:0004802;5.93e-08;19!UBERON:0000115;5.93e-08;19!UBERON:0002046;6.33e-08;5!UBERON:0000915;2.21e-07;52!UBERON:0004807;5.40e-07;22 | |||
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|short_description=p18@NKX2-1 | |||
}} | }} |
Latest revision as of 22:36, 19 September 2015
Short description: | p18@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_NKX2-1_5end |
Coexpression cluster: | C1393_thyroid_lung_throat_Alveolar_small_nonsmall_papillary |
Association with transcript: | -140bp_to_ENST00000354822_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | P43699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.61e-34 | 1 |
pneumocyte | 3.24e-12 | 3 |
epithelial cell of lung | 6.36e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.27e-17 | 2 |
lung cancer | 8.85e-10 | 15 |
respiratory system cancer | 3.14e-09 | 16 |
non-small cell lung carcinoma | 7.49e-08 | 5 |