FFCP PHASE1:Hg19::chr2:223289239..223289272,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130367 | |EntrezGene=130367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19953 | |HGNC=19953 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWX5 | |UniProt=Q8IWX5 | ||
|association_with_transcript=3bp_to_ENST00000321276_5end | |association_with_transcript=3bp_to_ENST00000321276_5end | ||
|cluster_id=chr2:223289239..223289272,+ | |||
|coexpression_cluster_id=C4192 | |||
|description=CAGE_peak_1_at_SGPP2_5end | |description=CAGE_peak_1_at_SGPP2_5end | ||
|id=chr2:223289239..223289272,+ | |id=chr2:223289239..223289272,+ | ||
|ontology_enrichment_celltype=CL:0002076!7.30e-08!43 | |ontology_enrichment_celltype=CL:0002076!7.30e-08!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.67e-38!115;UBERON:0001049!1.39e-18!57;UBERON:0005068!1.39e-18!57;UBERON:0006241!1.39e-18!57;UBERON:0007135!1.39e-18!57;UBERON:0002616!7.69e-15!59;UBERON:0003080!9.38e-15!42;UBERON:0002780!1.42e-14!41;UBERON:0001890!1.42e-14!41;UBERON:0006240!1.42e-14!41;UBERON:0003075!1.04e-13!86;UBERON:0007284!1.04e-13!86;UBERON:0002346!4.07e-12!90;UBERON:0000955!7.04e-12!69;UBERON:0006238!7.04e-12!69;UBERON:0000062!2.26e-11!511;UBERON:0002020!5.04e-11!34;UBERON:0003528!5.04e-11!34;UBERON:0001893!7.36e-11!34;UBERON:0001869!1.34e-10!32;UBERON:0000153!1.58e-10!129;UBERON:0007811!1.58e-10!129;UBERON:0003056!1.95e-10!61;UBERON:0002791!2.33e-10!33;UBERON:0001017!7.15e-10!82;UBERON:0000033!1.91e-09!123;UBERON:0005743!5.25e-09!86;UBERON:0000073!6.15e-09!94;UBERON:0001016!6.15e-09!94;UBERON:0002619!2.08e-08!22;UBERON:0004121!4.38e-08!169;UBERON:0001950!8.99e-08!20;UBERON:0000064!1.00e-07!219;UBERON:0000924!2.47e-07!173;UBERON:0006601!2.47e-07!173;UBERON:0000956!4.72e-07!25;UBERON:0000203!4.72e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.95e-12;41!UBERON:0001890;2.95e-12;41!UBERON:0001869;1.97e-11;32!UBERON:0000073;2.91e-11;53!UBERON:0002616;2.91e-11;53!UBERON:0001893;5.30e-11;34!UBERON:0003528;8.18e-11;34!UBERON:0002020;8.18e-11;34!UBERON:0002791;1.76e-10;32!UBERON:0007023;3.21e-10;114!UBERON:0002619;3.94e-10;22!UBERON:0001950;2.37e-09;20!UBERON:0000956;3.31e-08;25!UBERON:0000203;3.31e-08;25!UBERON:0004921;8.36e-08;33!UBERON:0001041;1.03e-07;14!UBERON:0000955;2.43e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.29e-37,114;UBERON:0000073,6.49e-20,53;UBERON:0002616,6.49e-20,53;UBERON:0001049,8.15e-20,56;UBERON:0005068,8.15e-20,56;UBERON:0006241,8.15e-20,56;UBERON:0007135,8.15e-20,56;UBERON:0002780,1.62e-16,41;UBERON:0001890,1.62e-16,41;UBERON:0003080,1.62e-16,41;UBERON:0006240,1.62e-16,41;UBERON:0000955,3.64e-14,68;UBERON:0006238,3.64e-14,68;UBERON:0003075,9.63e-13,82;UBERON:0007284,9.63e-13,82;UBERON:0001869,1.88e-12,32;UBERON:0010371,2.13e-12,104;UBERON:0003528,2.76e-12,34;UBERON:0002020,2.76e-12,34;UBERON:0011216,3.03e-12,223;UBERON:0001893,4.29e-12,34;UBERON:0001017,1.89e-11,81;UBERON:0002346,2.09e-11,86;UBERON:0002791,3.26e-11,32;UBERON:0001016,8.29e-11,89;UBERON:0003056,2.45e-10,61;UBERON:0002619,4.22e-10,22;UBERON:0001950,2.46e-09,20;UBERON:0000956,3.50e-08,25;UBERON:0000203,3.50e-08,25;UBERON:0004111,1.11e-07,240;UBERON:0004121,3.50e-07,171;UBERON:0000924,3.50e-07,171;UBERON:0006601,3.50e-07,171 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,5.89761447603621,7.6758128476967,0,0,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0.125542639594803,14.9770275265984,13.3002954908912,12.1214603223066,0,0,0.154816123316076,0,1.204823675113,5.54631015250181,0,0.426507697462265,0,2.21598163412751,0.601633342410425,1.30206522429511,0.895661896959697,1.94336199611388,1.54545340580512,0.145398238779565,0.377875943688809,0.242584061187816,2.09186133215116,2.46700732813095,3.09706370895104,2.01384674625505,0,0.47296445977717,2.75796544589295,2.5819387343353,6.77132432971709,0.941211697713023,1.63743690034707,1.34834090667051,1.22433556948361,3.20929027076094,1.27867425159808,0,0,0,13.3496249769149,15.3194010666608,8.71951148593805,0.502497330513487,0.521482918420201,0.217188844705117,12.7133895553007,6.62899744777616,6.96217252369946,0,0,0,0,0,0,0,0,0,0,0,0,1.28019066769952,1.60158394814405,0.574752439954483,0.661044872784862,0,0,0.587237189370939,1.91136614062614,0,1.68152568894461,0,2.75393678159366,3.93010762749165,4.93443597598822,0,2.28145586643513,2.36723902867367,0,0.557052284425868,3.53527088969805,2.43687284041983,4.33286182024025,1.15282187753108,1.1705341280389,0,0,0,0.14828656316206,0,0,0.339928028092699,2.68254345521345,2.74901956386104,4.04831507231205,2.54852331459277,0,2.85135613334512,1.20460095262218,1.15187950038977,0,2.13099526839615,1.64225599384209,1.00803371612366,1.06976078313403,1.30341963494519,0,0,0,0,0,0,0,0.486634870302636,0.567208902984407,0,0,4.71524671791765,6.9216104775583,7.04490441290416,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,7.84969293856562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,7.63689137654337,4.58887352622406,0.121973706129595,0.132529768321485,0.116193942869518,1.0366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0.171567810298526,0.768251997860379,6.74410519545717,0.402115889646523,0.833296006426766,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0,0,1.23108503043699,0.702012795417713,0.297262324577456,0,0.16798212819886,0.850650583454319,2.14940454486836,1.74380363108377,0.383382679165211,0,0,0,0.144119953416961,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,3.64871341923571,4.01805673145701,0,0,0,0,0,0.205476322550383,0,0,0.788123040807709,0.646882724578552,1.28343036279748,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.601519410909855,16.7587399863331,0,0,0,16.2431860646668,3.23464415838542,3.13739907670742,5.84556898613043,2.63879072232189,0,0,0,0,0.541892875087706,3.51182841698397,16.5669577479275,11.6350641250021,3.35812132083267,0,0,0,0,0,3.29731237272711,0,0,3.44559322797703,1.30012049207304,0,0,0,0,0,0,0,0,0,9.25595526021477,11.9157841766366,2.29702882490251,24.6824985287542,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73199802905922,0.670302275535787,1.08890984861323,4.61304623806218,1.29151611801369,8.42357378338128,11.9726141454902,0.918893600827838,1.52234282769651,0,1.13929437434833,0.238231775457789,1.23408681925858,0,0,0,0,0,0,0.929015875628594,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5039080865398,0,0,0,0,8.11731248108146,0,2.15012491469462,2.98244294329889,3.23539657744179,0,0,0,3.38721580026819,4.14425873296722,0.755798243562828,0,4.55413780205957,0,0.808815160325942,22.7356891838024,0,7.39825542277002,2.3948309234694,0,3.87733098438087,5.65885398787293,0,0.7812832832557,0,1.44999915086959,0.682760689712998,2.03402920234213,0,0,0,0,14.1718621730214,12.7832224942932,9.15490417902499,16.4763097297525,10.3441666633742,6.58156191461918,0,12.1298657522385,7.38722481636452,0.341826167541004,0,0,0,0.31900115973192,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,5.4859496777287,8.16164040795739,0,0.432777279484182,10.9478812418636,16.7184796911311,20.1639947828096,3.55825354416746,2.22415090103705,1.46190729307638,2.02203398942031,0.802577647298789,7.49646226321085,0,0.782658475728359,0,20.9129733510177,6.04953580243319,1.22429104652196,0.568679216656392,1.65355761355942,2.90326935912292,0,0,0,0,17.9304013998769,0,0.867798691675654,1.37189356380129,0,1.92199335066233,0,0,0,0,21.4345726439407,0,2.25980740780532,0,0,3.73533696139684,2.34661659281764,4.48889393408589,12.3802736948824,2.19790570540343,39.7689551345333,0,0,0,0,0.235694034616795,0,0,0,0,6.00420288709789,1.9166753044879,0,0,3.15464825135177,0.558564802544508,2.06244381610515,1.43574604915363,6.19004901546872,9.01374701086799,6.69514372325618,2.14987111957524,0,1.16495949527454,0,0,0,0,7.19723322559168,2.38568906942791,3.26888174667781,0,0,0,3.14963448172101,24.7616625458544,4.1917194094037,2.68347750079413,16.70680994743,14.4250117371245,1.37280437475228,0,0.19191519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| ||
|short_description=p1@SGPP2 | |short_description=p1@SGPP2 | ||
}} | }} |
Latest revision as of 23:31, 24 September 2015
Short description: | p1@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SGPP2_5end |
Coexpression cluster: | C4192_gastric_salivary_immature_signet_adenocarcinoma_small_tubular |
Association with transcript: | 3bp_to_ENST00000321276_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.29e-37 | 114 |
regional part of nervous system | 6.49e-20 | 53 |
regional part of brain | 6.49e-20 | 53 |
neural tube | 8.15e-20 | 56 |
neural rod | 8.15e-20 | 56 |
future spinal cord | 8.15e-20 | 56 |
neural keel | 8.15e-20 | 56 |
regional part of forebrain | 1.62e-16 | 41 |
forebrain | 1.62e-16 | 41 |
anterior neural tube | 1.62e-16 | 41 |
future forebrain | 1.62e-16 | 41 |
brain | 3.64e-14 | 68 |
future brain | 3.64e-14 | 68 |
neural plate | 9.63e-13 | 82 |
presumptive neural plate | 9.63e-13 | 82 |
cerebral hemisphere | 1.88e-12 | 32 |
ecto-epithelium | 2.13e-12 | 104 |
brain grey matter | 2.76e-12 | 34 |
gray matter | 2.76e-12 | 34 |
organ system subdivision | 3.03e-12 | 223 |
telencephalon | 4.29e-12 | 34 |
central nervous system | 1.89e-11 | 81 |
neurectoderm | 2.09e-11 | 86 |
regional part of telencephalon | 3.26e-11 | 32 |
nervous system | 8.29e-11 | 89 |
pre-chordal neural plate | 2.45e-10 | 61 |
regional part of cerebral cortex | 4.22e-10 | 22 |
neocortex | 2.46e-09 | 20 |
cerebral cortex | 3.50e-08 | 25 |
pallium | 3.50e-08 | 25 |
anatomical conduit | 1.11e-07 | 240 |
ectoderm-derived structure | 3.50e-07 | 171 |
ectoderm | 3.50e-07 | 171 |
presumptive ectoderm | 3.50e-07 | 171 |