FFCP PHASE1:Hg19::chr2:221093238..221093253,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:221093238..221093253,+ | |||
|description=CAGE_peak_at_chr2:221093238..221093253,+ | |description=CAGE_peak_at_chr2:221093238..221093253,+ | ||
|id=chr2:221093238..221093253,+ | |id=chr2:221093238..221093253,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.16e-17!19;CL:0000076!7.23e-15!62;CL:0000066!7.23e-11!254 | |ontology_enrichment_celltype=CL:0000077!1.16e-17!19;CL:0000076!7.23e-15!62;CL:0000066!7.23e-11!254 | ||
|ontology_enrichment_celltype_v019=CL:0000083;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,4.25e-10,63;CL:0000083,1.59e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.09e-17!106;DOID:1749!1.55e-16!14;DOID:14566!1.31e-15!239;DOID:162!3.76e-15!235;DOID:0050687!7.66e-14!143;DOID:4074!3.83e-07!2;DOID:4905!3.83e-07!2;DOID:3498!3.83e-07!2 | |ontology_enrichment_disease=DOID:305!4.09e-17!106;DOID:1749!1.55e-16!14;DOID:14566!1.31e-15!239;DOID:162!3.76e-15!235;DOID:0050687!7.66e-14!143;DOID:4074!3.83e-07!2;DOID:4905!3.83e-07!2;DOID:3498!3.83e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.20e-16;14!DOID:4074;1.14e-13;2!DOID:4905;1.14e-13;2!DOID:3498;1.14e-13;2!DOID:5093;1.75e-07;4!DOID:1793;1.75e-07;4!DOID:1612;1.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.33e-16,14;DOID:4074,9.40e-14,2;DOID:4905,9.40e-14,2;DOID:3498,9.40e-14,2;DOID:305,1.55e-08,106;DOID:5093,1.49e-07,4;DOID:1612,1.49e-07,4;DOID:1793,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003343!2.29e-12!4;UBERON:0004785!2.29e-12!4;UBERON:0003729!6.79e-10!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.31e-07;4!UBERON:0004785;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.31e-07,4;UBERON:0004785,1.31e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,1.22864280839693,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,1.82299432759663,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,1.45668227720456,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0.799238438328521,0,0,0,0,0,0,0.543616824294456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0.761610424337591,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0.694567422971502,0.244736704506468,1.4327107286519,0,0.877136198314828,0.706756583783524,3.47245268887647,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02405645854205,0.11796972334774,0.183428598521679,0.808679663052368,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,1.22864280839693,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,1.82299432759663,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,1.45668227720456,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0.799238438328521,0,0,0,0,0,0,0.543616824294456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0.761610424337591,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0.694567422971502,0.244736704506468,1.4327107286519,0,0.877136198314828,0.706756583783524,3.47245268887647,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02405645854205,0.11796972334774,0.183428598521679,0.808679663052368,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:221093238..221093253,+ | |short_description=p@chr2:221093238..221093253,+ | ||
}} | }} |
Latest revision as of 07:02, 29 July 2015
Short description: | p@chr2:221093238..221093253, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:221093238..221093253, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 4.25e-10 | 63 |
epithelial cell of pancreas | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.31e-07 | 4 |
respiratory system mucosa | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.33e-16 | 14 |
pancreas adenocarcinoma | 9.40e-14 | 2 |
pancreatic carcinoma | 9.40e-14 | 2 |
pancreatic ductal adenocarcinoma | 9.40e-14 | 2 |
carcinoma | 1.55e-08 | 106 |
thoracic cancer | 1.49e-07 | 4 |
breast cancer | 1.49e-07 | 4 |
pancreatic cancer | 1.59e-07 | 4 |