FFCP PHASE1:Hg19::chr2:220417483..220417507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:220417483..220417507,+ | |||
|description=CAGE_peak_at_chr2:220417483..220417507,+ | |description=CAGE_peak_at_chr2:220417483..220417507,+ | ||
|id=chr2:220417483..220417507,+ | |id=chr2:220417483..220417507,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002586;5.08e-09;3!CL:0000149;7.33e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,3.23e-09,3;CL:0000149,5.24e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.06e-32!86;UBERON:0000073!6.76e-30!94;UBERON:0001016!6.76e-30!94;UBERON:0001017!1.76e-29!82;UBERON:0001049!2.85e-26!57;UBERON:0005068!2.85e-26!57;UBERON:0006241!2.85e-26!57;UBERON:0007135!2.85e-26!57;UBERON:0000955!3.69e-26!69;UBERON:0006238!3.69e-26!69;UBERON:0002616!1.04e-22!59;UBERON:0002346!1.79e-22!90;UBERON:0003075!3.19e-22!86;UBERON:0007284!3.19e-22!86;UBERON:0002780!3.27e-21!41;UBERON:0001890!3.27e-21!41;UBERON:0006240!3.27e-21!41;UBERON:0003080!2.40e-20!42;UBERON:0002020!3.27e-18!34;UBERON:0003528!3.27e-18!34;UBERON:0001893!5.63e-18!34;UBERON:0002791!1.76e-17!33;UBERON:0003056!2.80e-17!61;UBERON:0001869!2.07e-16!32;UBERON:0000924!1.29e-15!173;UBERON:0006601!1.29e-15!173;UBERON:0004121!3.43e-15!169;UBERON:0000033!4.56e-15!123;UBERON:0007023!2.87e-14!115;UBERON:0000956!1.27e-13!25;UBERON:0000203!1.27e-13!25;UBERON:0000153!2.83e-13!129;UBERON:0007811!2.83e-13!129;UBERON:0002619!2.17e-12!22;UBERON:0001950!5.76e-11!20;UBERON:0000475!2.24e-07!365;UBERON:0000064!3.70e-07!219;UBERON:0003076!4.01e-07!15;UBERON:0003057!4.01e-07!15;UBERON:0000483!9.87e-07!309 | |ontology_enrichment_uberon=UBERON:0005743!3.06e-32!86;UBERON:0000073!6.76e-30!94;UBERON:0001016!6.76e-30!94;UBERON:0001017!1.76e-29!82;UBERON:0001049!2.85e-26!57;UBERON:0005068!2.85e-26!57;UBERON:0006241!2.85e-26!57;UBERON:0007135!2.85e-26!57;UBERON:0000955!3.69e-26!69;UBERON:0006238!3.69e-26!69;UBERON:0002616!1.04e-22!59;UBERON:0002346!1.79e-22!90;UBERON:0003075!3.19e-22!86;UBERON:0007284!3.19e-22!86;UBERON:0002780!3.27e-21!41;UBERON:0001890!3.27e-21!41;UBERON:0006240!3.27e-21!41;UBERON:0003080!2.40e-20!42;UBERON:0002020!3.27e-18!34;UBERON:0003528!3.27e-18!34;UBERON:0001893!5.63e-18!34;UBERON:0002791!1.76e-17!33;UBERON:0003056!2.80e-17!61;UBERON:0001869!2.07e-16!32;UBERON:0000924!1.29e-15!173;UBERON:0006601!1.29e-15!173;UBERON:0004121!3.43e-15!169;UBERON:0000033!4.56e-15!123;UBERON:0007023!2.87e-14!115;UBERON:0000956!1.27e-13!25;UBERON:0000203!1.27e-13!25;UBERON:0000153!2.83e-13!129;UBERON:0007811!2.83e-13!129;UBERON:0002619!2.17e-12!22;UBERON:0001950!5.76e-11!20;UBERON:0000475!2.24e-07!365;UBERON:0000064!3.70e-07!219;UBERON:0003076!4.01e-07!15;UBERON:0003057!4.01e-07!15;UBERON:0000483!9.87e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.73e-15;41!UBERON:0001890;5.73e-15;41!UBERON:0000073;1.14e-11;53!UBERON:0002616;1.14e-11;53!UBERON:0003528;2.43e-11;34!UBERON:0002020;2.43e-11;34!UBERON:0001893;5.52e-11;34!UBERON:0002619;1.53e-10;22!UBERON:0002791;2.16e-10;32!UBERON:0001950;2.33e-09;20!UBERON:0001869;2.52e-09;32!UBERON:0000956;4.31e-09;25!UBERON:0000203;4.31e-09;25!UBERON:0001781;5.08e-09;3!UBERON:0001782;5.08e-09;3!UBERON:0000125;1.40e-07;9!UBERON:0002308;1.40e-07;9!UBERON:0001017;1.89e-07;75!UBERON:0000955;2.97e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.61e-20,81;UBERON:0001049,1.14e-18,56;UBERON:0005068,1.14e-18,56;UBERON:0006241,1.14e-18,56;UBERON:0007135,1.14e-18,56;UBERON:0000073,5.07e-18,53;UBERON:0002616,5.07e-18,53;UBERON:0002780,1.27e-17,41;UBERON:0001890,1.27e-17,41;UBERON:0003080,1.27e-17,41;UBERON:0006240,1.27e-17,41;UBERON:0000955,1.80e-17,68;UBERON:0006238,1.80e-17,68;UBERON:0001016,2.26e-17,89;UBERON:0003056,1.57e-16,61;UBERON:0003075,2.08e-16,82;UBERON:0007284,2.08e-16,82;UBERON:0002346,2.40e-15,86;UBERON:0003528,7.93e-15,34;UBERON:0002020,7.93e-15,34;UBERON:0007023,8.99e-14,114;UBERON:0001893,7.61e-13,34;UBERON:0010371,8.26e-13,104;UBERON:0002791,7.56e-12,32;UBERON:0010314,1.72e-11,132;UBERON:0002619,1.18e-10,22;UBERON:0004121,1.65e-10,171;UBERON:0000924,1.65e-10,171;UBERON:0006601,1.65e-10,171;UBERON:0001869,6.22e-10,32;UBERON:0001950,1.72e-09,20;UBERON:0001782,3.23e-09,3;UBERON:0005424,3.23e-09,3;UBERON:0000956,3.44e-09,25;UBERON:0000203,3.44e-09,25;UBERON:0000125,1.19e-07,9;UBERON:0002308,1.19e-07,9;UBERON:0001897,4.79e-07,2;UBERON:0010225,4.79e-07,2;UBERON:0001781,5.24e-07,4;UBERON:0011216,6.88e-07,223;UBERON:0001894,9.70e-07,7;UBERON:0006222,9.70e-07,7 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0.655324116390517,0,0,0,0,0,0.730310090387373,0,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.547497700291537,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,0,0.639312809217652,0,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,1.12135520028461,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640672166455702,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.323292113637624,0.355009592516614,0,0,0,0,0,1.34171076742555,1.06023814657188,0.580969714347592,0.725627385107593,0.756962552626885,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,1.04337364477569,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0.1466765716419,0,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,1.08524321078289,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.585707074963566,0,0,0,0,0,0.0868836144680828,0.587403472388222,1.02943027143257,0,0,0,0.909382714338778,1.66435439510497,2.11673205330776,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0.120859449591622,0,0.276242966807689,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,2.50844886927427,0,0,0,0,0,1.53870075069834,1.31205858279882,1.30151357865721,2.36994326789761,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0.290012154876366,0,0,0,0.107420244868274,0.435050081742686,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,2.35359501941948,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.849523652246594,0,0,0,0.296964680832639,0,0,1.26602474769461,0.111308705022906,0,0.422250816255987,0.796991953004279,0,0.251932747854276,0,0,0,0,0,0.511572370226872,0.690503839458535,0,0,0.969332746095218,1.20598527610407,3.99227596002388,0,0,0,0.455173793141999,0.508507300585533,0,1.37897349296586,0,0.694499979733169,0.885741385813839,1.08536794762867,0,0.442317039724898,0.591095237907095,0.438770794307945,0.21787692703798,0,1.00035336054936,0,0.23056390438806,0.359030577639089,0,0.638002319463839,0,0,0,0,0,0,0.588187602953219,0.335643173951685,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,1.21322039365219,0,0.937057782901357,0,1.17398771359254,0,0,1.20990716048664,1.83643656978294,0.063186579628488,0,0.207376382794494,0,0.661983911750998,0,0,0,0,0.173559738335131,0.195984794828755,0.34823682632161,0.34945333648406,0,0,0,0,0.484945082442097,0.617792886840502,0.225980740780532,0,0,0.443175571691151,0.195551382734803,0,0,1.39866726707491,0,0.229073192331831,0.343189995723929,0,0.372757606696298,0,0.135904206073614,0.313808538937,0.203996435272644,2.02265412931063,0,1.64286454670392,0,0,0,0,0.229160424011684,0,0,0,0,0.53746777989381,0,0,0.236349546921671,0.412079291905832,0.13480708770837,0,0,0.795229689809303,2.04305109167363,1.44677833618517,1.92555211236127,3.73896304226267,0,0,0.303747783290123,0,0.0788057072991982,0.419636705079985,0.105600336519406,0.179287339332845,0.767660789277781,0,0,0,0,0,0.326587360109409,0,0,0,1.13312091520126,0,0,1.0342636508924,1.45455861916959,0,0.704815022316672,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0.854183854313742,1.1267183763585,0.573409195690071,3.32787154610557,0.869349641179368,0.691743174681154,0,0.454947352624943,2.28372266835974,0,0,0,0,0,0,0.378806010550178,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0.53168342911599,0,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0.57785949122191,0,0.260994291965212,0,1.62065732026684,0.244736704506468,0,0.617602894321944,0.877136198314828,1.06013487567529,0.192914038270915,0.506827321959218,0,0,0.303859956177382,1.24432592536558,0,0,0,1.63804924423206,0,0,0,0.213383459388282,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0.327628914576042,0,0.212574920101683,0.123935764259002,0,0,0,0.80057074828547,0.352675943690684,0,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| ||
|short_description=p@chr2:220417483..220417507,+ | |short_description=p@chr2:220417483..220417507,+ | ||
}} | }} |
Latest revision as of 06:58, 29 July 2015
Short description: | p@chr2:220417483..220417507, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:220417483..220417507, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 3.23e-09 | 3 |
visual pigment cell | 5.24e-07 | 4 |