FFCP PHASE1:Hg19::chr14:32902636..32902695,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:32902636..32902695,+
|short_description=p5@AKAP6
|description=CAGE_peak_5_at_AKAP6_5end
|association_with_transcript=266bp_to_ENST00000554449_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9472 | |EntrezGene=9472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=376 | |HGNC=376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=266bp_to_ENST00000554449_5end | |||
|cluster_id=chr14:32902636..32902695,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_5_at_AKAP6_5end | |||
|id=chr14:32902636..32902695,+ | |||
|ontology_enrichment_celltype=CL:0000945!9.17e-17!24;CL:0000826!9.17e-17!24;CL:0000236!2.52e-14!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.80e-29;13!CL:0000945;1.72e-20;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.25e-27,14;CL:0000945,1.63e-20,24;CL:0000826,1.63e-20,24;CL:0000838,8.50e-08,52;CL:0000542,1.35e-07,53;CL:0000051,1.35e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.98e-11;65!UBERON:0005062;7.81e-08;4!UBERON:0007284;7.81e-08;4!UBERON:0006965;8.40e-08;2!UBERON:0007297;4.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.71e-70!115;UBERON:0001049!3.92e-21!57;UBERON:0005068!3.92e-21!57;UBERON:0006241!3.92e-21!57;UBERON:0007135!3.92e-21!57;UBERON:0003080!4.47e-19!42;UBERON:0002616!8.33e-19!59;UBERON:0002780!4.89e-18!41;UBERON:0001890!4.89e-18!41;UBERON:0006240!4.89e-18!41;UBERON:0003075!3.30e-17!86;UBERON:0007284!3.30e-17!86;UBERON:0002346!7.55e-16!90;UBERON:0001893!1.44e-15!34;UBERON:0002020!1.58e-15!34;UBERON:0003528!1.58e-15!34;UBERON:0000955!4.17e-15!69;UBERON:0006238!4.17e-15!69;UBERON:0002791!7.18e-15!33;UBERON:0001017!9.17e-15!82;UBERON:0005743!1.37e-14!86;UBERON:0001869!4.26e-14!32;UBERON:0000073!5.67e-13!94;UBERON:0001016!5.67e-13!94;UBERON:0003056!1.71e-11!61;UBERON:0002619!5.54e-11!22;UBERON:0000956!2.23e-10!25;UBERON:0000203!2.23e-10!25;UBERON:0000153!1.38e-09!129;UBERON:0007811!1.38e-09!129;UBERON:0001950!2.09e-09!20;UBERON:0002298!5.20e-09!8;UBERON:0000033!6.46e-09!123;UBERON:0000025!1.54e-07!194;UBERON:0004121!1.64e-07!169;UBERON:0002420!2.27e-07!9;UBERON:0007245!2.27e-07!9;UBERON:0010009!2.27e-07!9;UBERON:0010011!2.27e-07!9;UBERON:0000454!2.27e-07!9;UBERON:0004111!2.35e-07!241;UBERON:0000477!4.26e-07!286;UBERON:0000924!4.78e-07!173;UBERON:0006601!4.78e-07!173;UBERON:0002308!7.26e-07!9;UBERON:0000125!7.26e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.54e-10;3!UBERON:0000946;2.54e-10;3!UBERON:0004151;1.23e-09;3!UBERON:0006947;1.43e-09;3!UBERON:0004054;1.43e-09;3!UBERON:0007023;6.04e-09;114!UBERON:0005904;2.80e-07;4!UBERON:0002081;4.02e-07;2!UBERON:0002133;4.02e-07;2!UBERON:0003135;7.28e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.27e-37,114;UBERON:0003978,2.71e-10,3;UBERON:0009751,2.71e-10,3;UBERON:0000946,2.71e-10,3;UBERON:0002523,2.71e-10,3;UBERON:0005983,2.71e-10,3;UBERON:0002165,2.71e-10,3;UBERON:0002062,2.71e-10,3;UBERON:0007280,2.71e-10,3;UBERON:0004151,1.44e-09,3;UBERON:0006947,1.67e-09,3;UBERON:0004054,1.67e-09,3;UBERON:0005904,3.13e-07,4;UBERON:0002081,4.15e-07,2;UBERON:0010227,4.15e-07,2;UBERON:0002133,4.28e-07,2;UBERON:0002360,7.44e-07,2;UBERON:0000094,7.44e-07,2;UBERON:0010743,7.44e-07,2;UBERON:0003135,7.73e-07,11 | |||
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| ||
|short_description=p5@AKAP6 | |||
}} | }} |
Latest revision as of 17:42, 19 September 2015
Short description: | p5@AKAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AKAP6_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 266bp_to_ENST00000554449_5end |
EntrezGene: | AKAP6 |
HGNC: | 376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.25e-27 | 14 |
lymphocyte of B lineage | 1.63e-20 | 24 |
pro-B cell | 1.63e-20 | 24 |
lymphoid lineage restricted progenitor cell | 8.50e-08 | 52 |
lymphocyte | 1.35e-07 | 53 |
common lymphoid progenitor | 1.35e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.27e-37 | 114 |
valve | 2.71e-10 | 3 |
cardiac mesenchyme | 2.71e-10 | 3 |
cardial valve | 2.71e-10 | 3 |
tunica intima | 2.71e-10 | 3 |
heart layer | 2.71e-10 | 3 |
endocardium | 2.71e-10 | 3 |
endocardial cushion | 2.71e-10 | 3 |
presumptive endocardium | 2.71e-10 | 3 |
cardiac chamber | 1.44e-09 | 3 |
male genital duct | 1.67e-09 | 3 |
internal male genitalia | 1.67e-09 | 3 |
duct of male reproductive system | 3.13e-07 | 4 |
cardiac atrium | 4.15e-07 | 2 |
future cardiac atrium | 4.15e-07 | 2 |
atrioventricular valve | 4.28e-07 | 2 |
meninx | 7.44e-07 | 2 |
membrane organ | 7.44e-07 | 2 |
meningeal cluster | 7.44e-07 | 2 |
male reproductive organ | 7.73e-07 | 11 |