FFCP PHASE1:Hg19::chr2:216219566..216219577,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216219566..216219577,- | |||
|description=CAGE_peak_at_chr2:216219566..216219577,- | |description=CAGE_peak_at_chr2:216219566..216219577,- | ||
|id=chr2:216219566..216219577,- | |id=chr2:216219566..216219577,- | ||
|ontology_enrichment_celltype=CL:0002570!5.38e-08!8 | |ontology_enrichment_celltype=CL:0002570!5.38e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000222;5.32e-12;1!CL:0000228;1.13e-11;1!CL:0002372;1.13e-11;1!CL:1000306;1.92e-11;4!CL:0002547;1.92e-11;4!CL:0002321;6.44e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.07e-11,1;CL:0002372,1.07e-11,1;CL:1000306,1.55e-11,4;CL:0002547,1.55e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.87e-09;5 | |||
|ontology_enrichment_disease=DOID:193!1.10e-13!29;DOID:120!9.00e-13!27;DOID:2394!1.62e-10!14;DOID:0050687!5.63e-07!143;DOID:14566!8.82e-07!239 | |ontology_enrichment_disease=DOID:193!1.10e-13!29;DOID:120!9.00e-13!27;DOID:2394!1.62e-10!14;DOID:0050687!5.63e-07!143;DOID:14566!8.82e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3112;1.13e-11;1!DOID:2394;2.71e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.19e-11,1;DOID:2394,3.05e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000060!7.75e-07!12 | |ontology_enrichment_uberon=UBERON:0000060!7.75e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.92e-11;4!UBERON:0000415;1.92e-11;4!UBERON:0007240;1.92e-11;4!UBERON:0005742;1.92e-11;4!UBERON:0005734;1.92e-11;4!UBERON:0004664;1.92e-11;4!UBERON:0004663;1.92e-11;4!UBERON:0002046;1.87e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.55e-11,4;UBERON:0007240,1.55e-11,4;UBERON:0005742,1.55e-11,4;UBERON:0005734,1.55e-11,4;UBERON:0004664,1.55e-11,4;UBERON:0004663,1.55e-11,4;UBERON:0002046,1.92e-09,5;UBERON:0004117,1.92e-09,5;UBERON:0007689,1.92e-09,5;UBERON:0007123,1.92e-09,5;UBERON:0003091,1.92e-09,5;UBERON:0004797,5.84e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,1.58891016975863,2.86836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.89694817844431,0,0,0.300091096084402,0,0.515281080091258,0,1.5189869901714,0,2.77677151668526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0.462629081407967,0.177561725313127,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.893288987462089,0,0,4.09256050879832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56721359635145,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.597019211547496,0.701139929541673,1.10961172300523,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0,0.887130899937803,0.159296767163702,0,0.776314784381297,1.24411862352257,0.53168342911599,1.04349012362347,0,0.380805212168795,0,0.181848659202559,0,0,3.98095888698616,0.800055529326307,0.343395705182793,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08891448825331,0,0,2.33832412111851,0.619678821295011,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0.80682027481408,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,3.20684545892101,0.207216164163037,0,0,0,0.354996002191696,0.0852134047591577,0,0.22910686854405,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,1.58891016975863,2.86836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.89694817844431,0,0,0.300091096084402,0,0.515281080091258,0,1.5189869901714,0,2.77677151668526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0.462629081407967,0.177561725313127,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.893288987462089,0,0,4.09256050879832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56721359635145,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.597019211547496,0.701139929541673,1.10961172300523,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0,0.887130899937803,0.159296767163702,0,0.776314784381297,1.24411862352257,0.53168342911599,1.04349012362347,0,0.380805212168795,0,0.181848659202559,0,0,3.98095888698616,0.800055529326307,0.343395705182793,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08891448825331,0,0,2.33832412111851,0.619678821295011,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0.80682027481408,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,3.20684545892101,0.207216164163037,0,0,0,0.354996002191696,0.0852134047591577,0,0.22910686854405,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:216219566..216219577,- | |short_description=p@chr2:216219566..216219577,- | ||
}} | }} |
Latest revision as of 05:58, 29 July 2015
Short description: | p@chr2:216219566..216219577, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216219566..216219577, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.07e-11 | 1 |
myotube | 1.07e-11 | 1 |
fibroblast of tunica adventitia of artery | 1.55e-11 | 4 |
fibroblast of the aortic adventitia | 1.55e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.55e-11 | 4 |
tunica adventitia of artery | 1.55e-11 | 4 |
adventitia | 1.55e-11 | 4 |
tunica adventitia of blood vessel | 1.55e-11 | 4 |
aorta tunica adventitia | 1.55e-11 | 4 |
aorta wall | 1.55e-11 | 4 |
thyroid gland | 1.92e-09 | 5 |
pharyngeal pouch | 1.92e-09 | 5 |
thyroid diverticulum | 1.92e-09 | 5 |
pharyngeal pouch 2 | 1.92e-09 | 5 |
thyroid primordium | 1.92e-09 | 5 |
blood vessel layer | 5.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.19e-11 | 1 |
ovarian cancer | 3.05e-07 | 14 |