FFCP PHASE1:Hg19::chr2:20101421..20101465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130502 | |EntrezGene=130502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32954 | |HGNC=32954 | ||
|TSSclassifier=strong | |||
|UniProt=C9JV54 | |UniProt=C9JV54 | ||
|association_with_transcript=-19bp_to_ENST00000431392_5end | |association_with_transcript=-19bp_to_ENST00000431392_5end | ||
|cluster_id=chr2:20101421..20101465,- | |||
|description=CAGE_peak_1_at_TTC32_5end | |description=CAGE_peak_1_at_TTC32_5end | ||
|id=chr2:20101421..20101465,- | |id=chr2:20101421..20101465,- | ||
|ontology_enrichment_celltype=CL:0000037!1.10e-15!172;CL:0000566!1.10e-15!172;CL:0002031!1.18e-15!124;CL:0000738!3.93e-15!140;CL:0002087!4.54e-15!119;CL:0000838!3.57e-14!52;CL:0000988!7.11e-14!182;CL:0000542!1.15e-13!53;CL:0000051!1.15e-13!53;CL:0002032!1.22e-13!165;CL:0000837!1.22e-13!165;CL:0000791!1.72e-10!18;CL:0000789!1.72e-10!18;CL:0002420!1.72e-10!18;CL:0002419!1.72e-10!18;CL:0000790!1.72e-10!18;CL:0000084!1.15e-09!25;CL:0000827!1.15e-09!25;CL:0000625!5.14e-07!11;CL:0000236!7.56e-07!14;CL:0000860!8.38e-07!45 | |ontology_enrichment_celltype=CL:0000037!1.10e-15!172;CL:0000566!1.10e-15!172;CL:0002031!1.18e-15!124;CL:0000738!3.93e-15!140;CL:0002087!4.54e-15!119;CL:0000838!3.57e-14!52;CL:0000988!7.11e-14!182;CL:0000542!1.15e-13!53;CL:0000051!1.15e-13!53;CL:0002032!1.22e-13!165;CL:0000837!1.22e-13!165;CL:0000791!1.72e-10!18;CL:0000789!1.72e-10!18;CL:0002420!1.72e-10!18;CL:0002419!1.72e-10!18;CL:0000790!1.72e-10!18;CL:0000084!1.15e-09!25;CL:0000827!1.15e-09!25;CL:0000625!5.14e-07!11;CL:0000236!7.56e-07!14;CL:0000860!8.38e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.63e-10;18!CL:0000789;1.63e-10;18!CL:0002419;1.63e-10;18!CL:0000084;8.84e-10;25!CL:0000542;1.74e-08;53!CL:0000625;5.90e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.15e-15,168;CL:0002031,2.18e-15,120;CL:0000738,7.13e-15,136;CL:0002087,8.32e-15,115;CL:0000838,3.52e-14,52;CL:0000988,5.97e-14,177;CL:0000542,1.14e-13,53;CL:0000051,1.14e-13,53;CL:0002032,2.33e-13,161;CL:0000837,2.33e-13,161;CL:0000791,1.70e-10,18;CL:0000789,1.70e-10,18;CL:0002420,1.70e-10,18;CL:0002419,1.70e-10,18;CL:0000790,1.70e-10,18;CL:0000084,1.13e-09,25;CL:0000827,1.13e-09,25;CL:0000625,5.11e-07,11;CL:0000236,7.51e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.63e-10;18!CL:0000051;1.74e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.90e-15!115;UBERON:0001049!9.23e-14!57;UBERON:0005068!9.23e-14!57;UBERON:0006241!9.23e-14!57;UBERON:0007135!9.23e-14!57;UBERON:0002780!5.67e-11!41;UBERON:0001890!5.67e-11!41;UBERON:0006240!5.67e-11!41;UBERON:0000955!5.88e-11!69;UBERON:0006238!5.88e-11!69;UBERON:0002616!1.44e-10!59;UBERON:0001017!2.05e-10!82;UBERON:0003080!2.21e-10!42;UBERON:0005743!1.43e-09!86;UBERON:0000073!9.65e-09!94;UBERON:0001016!9.65e-09!94;UBERON:0002020!1.54e-08!34;UBERON:0003528!1.54e-08!34;UBERON:0001893!2.05e-08!34;UBERON:0002791!3.60e-08!33;UBERON:0001869!1.62e-07!32;UBERON:0003075!2.81e-07!86;UBERON:0007284!2.81e-07!86;UBERON:0002390!3.69e-07!102;UBERON:0003061!3.69e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.69e-08;53!UBERON:0002616;2.69e-08;53!UBERON:0002780;9.07e-08;41!UBERON:0001890;9.07e-08;41!UBERON:0003528;2.25e-07;34!UBERON:0002020;2.25e-07;34!UBERON:0001893;2.67e-07;34!UBERON:0002791;7.13e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.96e-15,114;UBERON:0001049,2.31e-14,56;UBERON:0005068,2.31e-14,56;UBERON:0006241,2.31e-14,56;UBERON:0007135,2.31e-14,56;UBERON:0000073,1.29e-13,53;UBERON:0002616,1.29e-13,53;UBERON:0000955,2.11e-11,68;UBERON:0006238,2.11e-11,68;UBERON:0002780,5.61e-11,41;UBERON:0001890,5.61e-11,41;UBERON:0003080,5.61e-11,41;UBERON:0006240,5.61e-11,41;UBERON:0001017,8.43e-11,81;UBERON:0001016,9.63e-10,89;UBERON:0003528,1.52e-08,34;UBERON:0002020,1.52e-08,34;UBERON:0001893,2.04e-08,34;UBERON:0002791,8.66e-08,32;UBERON:0001869,1.61e-07,32;UBERON:0003075,2.76e-07,82;UBERON:0007284,2.76e-07,82;UBERON:0002390,6.36e-07,98;UBERON:0003061,6.36e-07,98 | |||
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| ||
|short_description=p1@TTC32 | |short_description=p1@TTC32 | ||
}} | }} |
Latest revision as of 10:00, 19 September 2015
Short description: | p1@TTC32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTC32_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000431392_5end |
EntrezGene: | TTC32 |
HGNC: | 32954 |
UniProt: | C9JV54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.15e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 2.18e-15 | 120 |
leukocyte | 7.13e-15 | 136 |
nongranular leukocyte | 8.32e-15 | 115 |
lymphoid lineage restricted progenitor cell | 3.52e-14 | 52 |
hematopoietic cell | 5.97e-14 | 177 |
lymphocyte | 1.14e-13 | 53 |
common lymphoid progenitor | 1.14e-13 | 53 |
hematopoietic oligopotent progenitor cell | 2.33e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.33e-13 | 161 |
mature alpha-beta T cell | 1.70e-10 | 18 |
alpha-beta T cell | 1.70e-10 | 18 |
immature T cell | 1.70e-10 | 18 |
mature T cell | 1.70e-10 | 18 |
immature alpha-beta T cell | 1.70e-10 | 18 |
T cell | 1.13e-09 | 25 |
pro-T cell | 1.13e-09 | 25 |
CD8-positive, alpha-beta T cell | 5.11e-07 | 11 |
B cell | 7.51e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.96e-15 | 114 |
neural tube | 2.31e-14 | 56 |
neural rod | 2.31e-14 | 56 |
future spinal cord | 2.31e-14 | 56 |
neural keel | 2.31e-14 | 56 |
regional part of nervous system | 1.29e-13 | 53 |
regional part of brain | 1.29e-13 | 53 |
brain | 2.11e-11 | 68 |
future brain | 2.11e-11 | 68 |
regional part of forebrain | 5.61e-11 | 41 |
forebrain | 5.61e-11 | 41 |
anterior neural tube | 5.61e-11 | 41 |
future forebrain | 5.61e-11 | 41 |
central nervous system | 8.43e-11 | 81 |
nervous system | 9.63e-10 | 89 |
brain grey matter | 1.52e-08 | 34 |
gray matter | 1.52e-08 | 34 |
telencephalon | 2.04e-08 | 34 |
regional part of telencephalon | 8.66e-08 | 32 |
cerebral hemisphere | 1.61e-07 | 32 |
neural plate | 2.76e-07 | 82 |
presumptive neural plate | 2.76e-07 | 82 |
hematopoietic system | 6.36e-07 | 98 |
blood island | 6.36e-07 | 98 |