FFCP PHASE1:Hg19::chr14:23862593..23862603,-: Difference between revisions
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|id=chr14:23862593..23862603,-
|short_description=p3@MYH6
|description=CAGE_peak_3_at_MYH6_5end
|association_with_transcript=-446bp_to_BC117511_5end
|EntrezGene=46...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4624 | |EntrezGene=4624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7576 | |HGNC=7576 | ||
|TSSclassifier=strong | |||
|UniProt=Q1ED46 | |UniProt=Q1ED46 | ||
|association_with_transcript=-446bp_to_BC117511_5end | |||
|cluster_id=chr14:23862593..23862603,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_MYH6_5end | |||
|id=chr14:23862593..23862603,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.58e-34;1!UBERON:0000358;7.06e-34;1!UBERON:0005062;1.17e-33;4!UBERON:0007284;1.17e-33;4 | |||
|ontology_enrichment_disease=DOID:114!1.89e-37!2;DOID:178!1.56e-19!1;DOID:326!1.56e-19!1;DOID:3978!1.56e-19!1;DOID:3394!1.56e-19!1;DOID:5844!1.56e-19!1;DOID:1287!2.71e-19!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.45e-66;2!DOID:178;5.05e-34;1!DOID:326;5.05e-34;1!DOID:3978;5.05e-34;1!DOID:3394;5.05e-34;1!DOID:5844;5.05e-34;1!DOID:1287;5.98e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.45e-66,2;DOID:178,5.05e-34,1;DOID:326,5.05e-34,1;DOID:3978,5.05e-34,1;DOID:3394,5.05e-34,1;DOID:5844,5.05e-34,1;DOID:1287,5.98e-34,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.86e-32!27;UBERON:0003978!3.82e-25!3;UBERON:0009751!3.82e-25!3;UBERON:0000946!3.82e-25!3;UBERON:0002523!3.82e-25!3;UBERON:0005983!3.82e-25!3;UBERON:0002165!3.82e-25!3;UBERON:0002062!3.82e-25!3;UBERON:0007280!3.82e-25!3;UBERON:0002079!1.08e-19!1;UBERON:0002135!1.30e-19!1;UBERON:0002146!2.25e-19!1;UBERON:0005623!2.25e-19!1;UBERON:0003103!2.53e-16!69;UBERON:0000948!1.93e-12!24;UBERON:0005498!1.93e-12!24;UBERON:0004140!1.93e-12!24;UBERON:0009881!1.93e-12!24;UBERON:0004141!1.93e-12!24;UBERON:0003084!1.93e-12!24;UBERON:0007005!1.93e-12!24;UBERON:0004139!1.93e-12!24;UBERON:0004291!1.93e-12!24;UBERON:0002081!1.57e-10!2;UBERON:0002133!1.72e-10!2;UBERON:0003127!2.72e-10!2;UBERON:0001009!9.12e-10!113;UBERON:0004151!1.93e-07!3;UBERON:0007023!2.23e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.91e-44;3!UBERON:0000946;1.91e-44;3!UBERON:0002079;2.58e-34;1!UBERON:0002135;3.61e-34;1!UBERON:0002146;9.85e-34;1!UBERON:0005623;9.85e-34;1!UBERON:0007100;2.56e-33;25!UBERON:0002081;6.48e-18;2!UBERON:0002133;7.67e-18;2!UBERON:0000948;2.99e-14;22!UBERON:0010313;3.71e-14;10!UBERON:0004151;2.07e-12;3!UBERON:0003103;2.17e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.91e-44,3;UBERON:0009751,1.91e-44,3;UBERON:0000946,1.91e-44,3;UBERON:0002523,1.91e-44,3;UBERON:0005983,1.91e-44,3;UBERON:0002165,1.91e-44,3;UBERON:0002062,1.91e-44,3;UBERON:0007280,1.91e-44,3;UBERON:0002079,2.58e-34,1;UBERON:0002135,3.61e-34,1;UBERON:0002146,9.85e-34,1;UBERON:0005623,9.85e-34,1;UBERON:0007100,6.67e-31,27;UBERON:0004797,9.49e-20,7;UBERON:0002081,6.48e-18,2;UBERON:0010227,6.48e-18,2;UBERON:0002133,7.67e-18,2;UBERON:0010313,3.71e-14,10;UBERON:0002342,3.71e-14,10;UBERON:0005062,3.71e-14,10;UBERON:0000948,3.94e-13,24;UBERON:0005498,3.94e-13,24;UBERON:0004140,3.94e-13,24;UBERON:0009881,3.94e-13,24;UBERON:0004141,3.94e-13,24;UBERON:0003084,3.94e-13,24;UBERON:0007005,3.94e-13,24;UBERON:0004139,3.94e-13,24;UBERON:0004291,3.94e-13,24;UBERON:0003103,1.30e-12,68;UBERON:0004151,2.07e-12,3;UBERON:0001009,8.07e-08,112;UBERON:0007023,1.09e-07,114 | |||
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|short_description=p3@MYH6 | |||
}} | }} |
Latest revision as of 10:09, 19 September 2015
Short description: | p3@MYH6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYH6_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -446bp_to_BC117511_5end |
EntrezGene: | MYH6 |
HGNC: | 7576 |
UniProt: | Q1ED46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.91e-44 | 3 |
cardiac mesenchyme | 1.91e-44 | 3 |
cardial valve | 1.91e-44 | 3 |
tunica intima | 1.91e-44 | 3 |
heart layer | 1.91e-44 | 3 |
endocardium | 1.91e-44 | 3 |
endocardial cushion | 1.91e-44 | 3 |
presumptive endocardium | 1.91e-44 | 3 |
left cardiac atrium | 2.58e-34 | 1 |
mitral valve | 3.61e-34 | 1 |
pulmonary valve | 9.85e-34 | 1 |
semi-lunar valve | 9.85e-34 | 1 |
primary circulatory organ | 6.67e-31 | 27 |
blood vessel layer | 9.49e-20 | 7 |
cardiac atrium | 6.48e-18 | 2 |
future cardiac atrium | 6.48e-18 | 2 |
atrioventricular valve | 7.67e-18 | 2 |
neural crest-derived structure | 3.71e-14 | 10 |
neural crest | 3.71e-14 | 10 |
neural fold | 3.71e-14 | 10 |
heart | 3.94e-13 | 24 |
primitive heart tube | 3.94e-13 | 24 |
primary heart field | 3.94e-13 | 24 |
anterior lateral plate mesoderm | 3.94e-13 | 24 |
heart tube | 3.94e-13 | 24 |
heart primordium | 3.94e-13 | 24 |
cardiac mesoderm | 3.94e-13 | 24 |
cardiogenic plate | 3.94e-13 | 24 |
heart rudiment | 3.94e-13 | 24 |
compound organ | 1.30e-12 | 68 |
cardiac chamber | 2.07e-12 | 3 |
circulatory system | 8.07e-08 | 112 |
adult organism | 1.09e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.45e-66 | 2 |
vascular disease | 5.05e-34 | 1 |
ischemia | 5.05e-34 | 1 |
extrinsic cardiomyopathy | 5.05e-34 | 1 |
myocardial ischemia | 5.05e-34 | 1 |
myocardial infarction | 5.05e-34 | 1 |
cardiovascular system disease | 5.98e-34 | 4 |