FFCP PHASE1:Hg19::chr14:23313988..23313992,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23313988..23313992,+
|short_description=p@chr14:23313988..23313992,+
|description=CAGE_peak_at_chr14:23313988..23313992,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:23313988..23313992,+ | |||
|description=CAGE_peak_at_chr14:23313988..23313992,+ | |||
|id=chr14:23313988..23313992,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.39e-27!180;CL:0002371!1.32e-25!591;CL:0000220!1.99e-25!246;CL:0002321!9.04e-25!248;CL:0000144!7.81e-22!625;CL:0000183!8.32e-21!59;CL:0000680!1.20e-19!57;CL:0000056!1.20e-19!57;CL:0000355!1.20e-19!57;CL:0000222!1.52e-19!119;CL:0000187!3.10e-19!54;CL:0000548!1.12e-18!679;CL:0000004!1.12e-18!679;CL:0000255!1.12e-18!679;CL:0000012!4.12e-18!682;CL:0000192!1.14e-17!42;CL:0000514!1.14e-17!42;CL:0000393!3.50e-16!60;CL:0000211!3.50e-16!60;CL:0000359!1.77e-13!32;CL:0000003!2.54e-13!722;CL:0000057!2.83e-10!75;CL:0000115!9.18e-08!35;CL:0002139!9.31e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.05e-13;32!CL:0000192;5.88e-12;43!CL:0000187;6.09e-10;55!CL:0000393;2.56e-09;61!CL:0000211;2.56e-09;61!CL:0000115;9.86e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.40e-19,55;CL:0000222,7.30e-19,121;CL:0000192,2.44e-18,43;CL:0000514,2.44e-18,43;CL:0000680,4.77e-18,58;CL:0000056,4.77e-18,58;CL:0000355,4.77e-18,58;CL:0000393,1.13e-16,61;CL:0000211,1.13e-16,61;CL:0000359,1.31e-14,32;CL:0002321,3.35e-13,250;CL:0000115,5.31e-10,36;CL:0002078,5.16e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;5.88e-12;43!CL:0000355;1.91e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.46e-22!79;UBERON:0007798!9.46e-22!79;UBERON:0000486!1.08e-20!82;UBERON:0000490!1.14e-20!138;UBERON:0005256!2.31e-20!143;UBERON:0000914!2.05e-19!83;UBERON:0002329!2.05e-19!83;UBERON:0003077!2.05e-19!83;UBERON:0003059!2.05e-19!83;UBERON:0007282!2.05e-19!83;UBERON:0009618!2.05e-19!83;UBERON:0007285!2.05e-19!83;UBERON:0004535!2.34e-19!110;UBERON:0004872!1.21e-18!84;UBERON:0001009!5.04e-18!113;UBERON:0004290!1.32e-17!70;UBERON:0003914!2.97e-17!118;UBERON:0000055!4.24e-17!69;UBERON:0001134!5.89e-17!61;UBERON:0002036!5.89e-17!61;UBERON:0003082!5.89e-17!61;UBERON:0001981!1.96e-16!60;UBERON:0007500!1.96e-16!60;UBERON:0004537!1.96e-16!60;UBERON:0006965!1.96e-16!60;UBERON:0002385!2.75e-16!63;UBERON:0001015!2.75e-16!63;UBERON:0000383!2.75e-16!63;UBERON:0000119!4.17e-16!312;UBERON:0000483!4.05e-15!309;UBERON:0001637!1.28e-13!42;UBERON:0003509!1.28e-13!42;UBERON:0004572!1.28e-13!42;UBERON:0002100!1.35e-12!216;UBERON:0004573!3.57e-10!33;UBERON:0004571!3.57e-10!33;UBERON:0000475!6.31e-10!365;UBERON:0003104!1.34e-09!238;UBERON:0009142!1.34e-09!238;UBERON:0000481!4.42e-09!347;UBERON:0000467!5.27e-08!625;UBERON:0000480!7.07e-08!626;UBERON:0000468!1.05e-07!659;UBERON:0005085!1.96e-07!29;UBERON:0003102!9.18e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.19e-11;56!UBERON:0001981;1.19e-11;56!UBERON:0004537;1.19e-11;56!UBERON:0000055;5.06e-11;65!UBERON:0001637;5.66e-10;42!UBERON:0003509;5.66e-10;42!UBERON:0004572;5.66e-10;42!UBERON:0002049;3.24e-09;75!UBERON:0007798;3.24e-09;75!UBERON:0004573;1.01e-08;33!UBERON:0004571;1.01e-08;33!UBERON:0003914;7.12e-08;74!UBERON:0000019;5.77e-07;19!UBERON:0000047;5.77e-07;19!UBERON:0004088;5.77e-07;19!UBERON:0010230;5.77e-07;19!UBERON:0001801;8.37e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.80e-21,78;UBERON:0007798,2.80e-21,78;UBERON:0007503,2.80e-18,78;UBERON:0000486,7.07e-18,83;UBERON:0000055,7.36e-18,68;UBERON:0004535,3.77e-17,109;UBERON:0007500,4.99e-17,59;UBERON:0001981,4.99e-17,59;UBERON:0004537,4.99e-17,59;UBERON:0006965,4.99e-17,59;UBERON:0002329,2.23e-16,71;UBERON:0003059,2.23e-16,71;UBERON:0007282,2.23e-16,71;UBERON:0004290,2.23e-16,71;UBERON:0009618,2.23e-16,71;UBERON:0001009,2.54e-16,112;UBERON:0004872,2.80e-16,83;UBERON:0001134,3.02e-16,62;UBERON:0002036,3.02e-16,62;UBERON:0003082,3.02e-16,62;UBERON:0000490,3.56e-16,148;UBERON:0003914,4.77e-16,117;UBERON:0003077,5.29e-16,72;UBERON:0007285,5.29e-16,72;UBERON:0007524,1.22e-15,73;UBERON:0002385,1.95e-15,64;UBERON:0001015,1.95e-15,64;UBERON:0000383,1.95e-15,64;UBERON:0000119,2.35e-14,309;UBERON:0005256,2.47e-14,122;UBERON:0001637,1.23e-13,42;UBERON:0003509,1.23e-13,42;UBERON:0004572,1.23e-13,42;UBERON:0000483,1.57e-13,306;UBERON:0003104,1.28e-12,160;UBERON:0009142,1.28e-12,160;UBERON:0004573,1.02e-09,33;UBERON:0004571,1.02e-09,33;UBERON:0002100,6.59e-09,199;UBERON:0003498,5.41e-08,5;UBERON:0005985,5.41e-08,5;UBERON:0005085,8.09e-08,31 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.491467873003018,0,4.36882744260345,0.263766978228454,3.58922423584135,0,0.672325146451775,0,0.730310090387373,1.46379839637152,3.57051068422685,1.22400414746552,0.940364164434263,2.57612388417951,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70215567407342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.9408389224012,1.80719576192283,0,0.579386075843295,1.5905718941022,0.486634870302636,1.03988298880475,0.221729397462564,0.351339142772504,0.327447688744282,5.10013403609559,0,0,0,0,0,0,0,4.57153536943422,0.860234595106124,5.20710752411391,0,0,0.825354125820202,2.29894463190492,0.516833518338658,1.06729878806013,1.00416183829401,0,1.52054421143703,0.488124115096339,1.47065232138347,1.62028389576352,1.87529429396568,0.898117490504679,0.337834441449967,4.5994991239765,13.2897192339538,0.549605231791222,0,0,3.92484646928281,0,0.759783069987479,0.264818361626438,0,0.709336764396714,1.12135520028461,10.6748995729705,0.49333509683432,1.55605517699883,0,0.653847612453835,1.51357427644931,0.576175924479999,2.34321431833797,0,2.2818872861778,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,1.02077085627447,1.10550885580591,0.309977343527296,0,0.494533858557114,1.82032272387605,0.718618141816238,1.68336113954066,0.375355559615893,0.831192346452549,0,0.30648779579902,0.45071417671979,2.49550802952046,0,1.49490172172997,0.635795703478686,0,2.37020817248409,0,1.8611685633159,0.337552664482532,0.974370051611986,0,0.920498986422993,1.77810662500693,0,1.10827308050404,1.18692414617341,1.93260853163297,0.818238361772504,0.573609190778008,0,0,0.116193942869518,0,0,0,0,1.28648187638577,2.76269842704961,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,2.057870056657,1.47008711385542,0,0,0,0,0.122988438543114,2.91665277507493,0.768251997860379,5.62008766288098,0.402115889646523,2.59247646443883,1.3032332212413,1.03993478527958,0,1.62302566965108,1.05667824812239,1.44366447761074,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,1.27597587518148,1.25381931783988,1.74380363108377,0.766765358330422,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0,0.571652865261156,1.34557301214433,0.87192013766656,1.6134422880609,0.387815147273333,10.7296933755565,0.845302752556,1.06375246633948,0,2.31486636835928,0,0,1.85871391755592,4.34097284313154,0,1.30294473717494,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,2.54094624222463,1.30139853857622,0,0.670065061337395,0,0,0,0,2.33113834266366,2.00068208423871,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.368738337083406,2.86715927744673,4.50342662164303,2.40200396667599,0,0.215714200818617,0,0,3.32870879020994,0.907170879989041,0,0,0.561320188866147,0,0.511707249066704,0,0,1.23367755042124,0.532685175939381,2.7101961484557,1.55776328755086,0.232420756919918,0.362578348774867,0.802025881213139,0.184161977871793,0.574072240823034,0.182091168006717,0.524497659837696,1.80479845162965,0.770153371044148,1.56869953835371,0,1.47772280450026,1.13733384070897,1.36074964221213,0.215915916102139,4.62681758070868,1.08378575017541,0,0.254876273045038,0,0.671624264166535,0,0.261435451024901,1.28225062558195,2.62411716559765,0.650756789328606,0,0,0.082509499920588,2.29706215198469,0.650060246036521,1.6068392984416,8.21701105483037,0.616194468458578,0.307007349452259,0,2.25582514223375,0.290033387828457,0.340906509664404,4.80772992492382,0.826424576804891,0.192190067365106,0.382838137483752,0.4046311234222,0.464845549297286,0.31481234683064,13.940745403212,6.77673876387395,1.06461206063404,13.9189278732012,3.33583594387056,0,1.86079184679834,0.316379424718726,0.190630193923825,8.70052490458535,0,12.0917234211856,4.70969184119538,3.59744915166629,0,0.706874414074119,3.23491970517306,1.58510321173008,1.68503382495592,3.90106991271672,0.974853958525138,1.05650146756755,0.409499734223957,0.707027159768564,3.39024349860728,6.61638412255349,0,0.438450885253763,2.31510213706675,2.62357900818653,1.21746226177622,0.92947049429925,1.69017361519345,5.0193973271418,2.16147890228867,1.78335525740625,8.15950447362375,0,0.658589785919804,2.27683904259429,1.74967360122491,1.63577591633371,1.34060455107157,2.17781969722645,0.0941438007767792,1.72202149068492,1.68471475667626,0.886860307073351,2.98640420269047,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.614481528616916,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0.307160702099232,0,0,5.78805266119111,0,0,0,0,0,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| ||
|short_description=p@chr14:23313988..23313992,+ | |||
}} | }} |
Latest revision as of 19:19, 24 July 2015
Short description: | p@chr14:23313988..23313992, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23313988..23313992, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.40e-19 | 55 |
mesodermal cell | 7.30e-19 | 121 |
smooth muscle cell | 2.44e-18 | 43 |
smooth muscle myoblast | 2.44e-18 | 43 |
muscle precursor cell | 4.77e-18 | 58 |
myoblast | 4.77e-18 | 58 |
multi-potent skeletal muscle stem cell | 4.77e-18 | 58 |
electrically responsive cell | 1.13e-16 | 61 |
electrically active cell | 1.13e-16 | 61 |
vascular associated smooth muscle cell | 1.31e-14 | 32 |
embryonic cell | 3.35e-13 | 250 |
endothelial cell | 5.31e-10 | 36 |
meso-epithelial cell | 5.16e-07 | 45 |