FFCP PHASE1:Hg19::chr8:1959291..1959319,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:1959291..1959319,+ | |||
|coexpression_cluster_id=C661 | |||
|description=CAGE_peak_at_chr8:1959291..1959319,+ | |description=CAGE_peak_at_chr8:1959291..1959319,+ | ||
|id=chr8:1959291..1959319,+ | |id=chr8:1959291..1959319,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.34e-21!42;CL:0000860!1.39e-19!45;CL:0000557!6.17e-13!71;CL:0002194!7.25e-13!63;CL:0000576!7.25e-13!63;CL:0000040!7.25e-13!63;CL:0000559!7.25e-13!63;CL:0002009!2.19e-12!65;CL:0000839!2.65e-11!70;CL:0000763!7.53e-11!112;CL:0000049!7.53e-11!112;CL:0000037!1.07e-10!172;CL:0000566!1.07e-10!172;CL:0000766!3.43e-10!76;CL:0002087!6.27e-10!119;CL:0000988!7.78e-10!182;CL:0002032!4.15e-09!165;CL:0000837!4.15e-09!165;CL:0000738!5.56e-09!140;CL:0002031!3.00e-08!124 | |ontology_enrichment_celltype=CL:0002057!3.34e-21!42;CL:0000860!1.39e-19!45;CL:0000557!6.17e-13!71;CL:0002194!7.25e-13!63;CL:0000576!7.25e-13!63;CL:0000040!7.25e-13!63;CL:0000559!7.25e-13!63;CL:0002009!2.19e-12!65;CL:0000839!2.65e-11!70;CL:0000763!7.53e-11!112;CL:0000049!7.53e-11!112;CL:0000037!1.07e-10!172;CL:0000566!1.07e-10!172;CL:0000766!3.43e-10!76;CL:0002087!6.27e-10!119;CL:0000988!7.78e-10!182;CL:0002032!4.15e-09!165;CL:0000837!4.15e-09!165;CL:0000738!5.56e-09!140;CL:0002031!3.00e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0002032;5.71e-21;1!CL:0000557;5.71e-21;1!CL:0000860;1.67e-15;33!CL:0002057;1.67e-15;33!CL:0000473;2.41e-11;39!CL:0000234;2.41e-11;39!CL:0000576;2.05e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.63e-12,42;CL:0002057,5.63e-12,42;CL:0000473,1.71e-10,48;CL:0000234,1.71e-10,48;CL:0000557,1.97e-10,67;CL:0002032,1.64e-09,161;CL:0000837,1.64e-09,161;CL:0000037,4.27e-09,168;CL:0000763,1.06e-08,108;CL:0000049,1.06e-08,108;CL:0000988,1.31e-08,177;CL:0002194,2.06e-08,59;CL:0000576,2.06e-08,59;CL:0000040,2.06e-08,59;CL:0000559,2.06e-08,59;CL:0002087,3.72e-08,115;CL:0002009,3.84e-08,61;CL:0002031,8.34e-08,120;CL:0000839,1.54e-07,66;CL:0000766,6.39e-07,72;CL:0000738,7.49e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.41e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.28e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.88e-11!80;UBERON:0002390!1.33e-10!102;UBERON:0003061!1.33e-10!102;UBERON:0001474!3.80e-10!86;UBERON:0002780!9.06e-10!41;UBERON:0001890!9.06e-10!41;UBERON:0006240!9.06e-10!41;UBERON:0003080!1.68e-09!42;UBERON:0002193!2.44e-09!112;UBERON:0004765!3.44e-08!101;UBERON:0001434!3.44e-08!101;UBERON:0001049!4.99e-08!57;UBERON:0005068!4.99e-08!57;UBERON:0006241!4.99e-08!57;UBERON:0007135!4.99e-08!57;UBERON:0002791!7.17e-08!33;UBERON:0002405!7.18e-08!115;UBERON:0002616!1.07e-07!59;UBERON:0000200!1.08e-07!6;UBERON:0001950!1.08e-07!20;UBERON:0001893!1.30e-07!34;UBERON:0000955!1.84e-07!69;UBERON:0006238!1.84e-07!69;UBERON:0002771!2.50e-07!3;UBERON:0002619!5.61e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.52e-11;2!UBERON:0002757;3.52e-11;2!UBERON:0010134;3.52e-11;2!UBERON:0005408;3.52e-11;2!UBERON:0001899;3.52e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.52e-11,2;UBERON:0002757,4.52e-11,2;UBERON:0010134,4.52e-11,2;UBERON:0005408,4.52e-11,2;UBERON:0001899,4.52e-11,2;UBERON:0002371,3.37e-09,76;UBERON:0001474,1.59e-08,82;UBERON:0004765,9.22e-08,90;UBERON:0002405,1.65e-07,93;UBERON:0002390,4.04e-07,98;UBERON:0003061,4.04e-07,98;UBERON:0001434,5.63e-07,100 | |||
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|short_description=p@chr8:1959291..1959319,+ | |short_description=p@chr8:1959291..1959319,+ | ||
}} | }} |
Latest revision as of 16:39, 31 July 2015
Short description: | p@chr8:1959291..1959319, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:1959291..1959319, + |
Coexpression cluster: | C661_acute_lung_Dendritic_placenta_granulocyte_Adipocyte_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.63e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.63e-12 | 42 |
defensive cell | 1.71e-10 | 48 |
phagocyte | 1.71e-10 | 48 |
granulocyte monocyte progenitor cell | 1.97e-10 | 67 |
hematopoietic oligopotent progenitor cell | 1.64e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-09 | 161 |
hematopoietic stem cell | 4.27e-09 | 168 |
myeloid cell | 1.06e-08 | 108 |
common myeloid progenitor | 1.06e-08 | 108 |
hematopoietic cell | 1.31e-08 | 177 |
monopoietic cell | 2.06e-08 | 59 |
monocyte | 2.06e-08 | 59 |
monoblast | 2.06e-08 | 59 |
promonocyte | 2.06e-08 | 59 |
nongranular leukocyte | 3.72e-08 | 115 |
macrophage dendritic cell progenitor | 3.84e-08 | 61 |
hematopoietic lineage restricted progenitor cell | 8.34e-08 | 120 |
myeloid lineage restricted progenitor cell | 1.54e-07 | 66 |
myeloid leukocyte | 6.39e-07 | 72 |
leukocyte | 7.49e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.52e-11 | 2 |
regional part of epithalamus | 4.52e-11 | 2 |
secretory circumventricular organ | 4.52e-11 | 2 |
circumventricular organ | 4.52e-11 | 2 |
epithalamus | 4.52e-11 | 2 |
bone marrow | 3.37e-09 | 76 |
bone element | 1.59e-08 | 82 |
skeletal element | 9.22e-08 | 90 |
immune system | 1.65e-07 | 93 |
hematopoietic system | 4.04e-07 | 98 |
blood island | 4.04e-07 | 98 |
skeletal system | 5.63e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.28e-09 | 10 |