FFCP PHASE1:Hg19::chr2:170550877..170550936,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=129881 | |EntrezGene=129881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25064 | |HGNC=25064 | ||
|TSSclassifier=strong | |||
|UniProt=B4DX81,Q0VFZ6 | |UniProt=B4DX81,Q0VFZ6 | ||
|association_with_transcript=0bp_to_NM_001085447,uc002ufe.2,uc002uff.2_5end | |association_with_transcript=0bp_to_NM_001085447,uc002ufe.2,uc002uff.2_5end | ||
|cluster_id=chr2:170550877..170550936,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_C2orf77_5end | |description=CAGE_peak_1_at_C2orf77_5end | ||
|id=chr2:170550877..170550936,- | |id=chr2:170550877..170550936,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.07e-09!143;DOID:305!4.34e-07!106;DOID:162!8.12e-07!235 | |ontology_enrichment_disease=DOID:0050687!6.07e-09!143;DOID:305!4.34e-07!106;DOID:162!8.12e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:193;9.18e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.34e-08,143;DOID:305,7.72e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005743!5.70e-18!86;UBERON:0001017!1.29e-17!82;UBERON:0000073!3.63e-17!94;UBERON:0001016!3.63e-17!94;UBERON:0001049!2.53e-15!57;UBERON:0005068!2.53e-15!57;UBERON:0006241!2.53e-15!57;UBERON:0007135!2.53e-15!57;UBERON:0002780!7.07e-15!41;UBERON:0001890!7.07e-15!41;UBERON:0006240!7.07e-15!41;UBERON:0000955!8.36e-15!69;UBERON:0006238!8.36e-15!69;UBERON:0002346!3.62e-14!90;UBERON:0002616!7.20e-14!59;UBERON:0003080!7.62e-14!42;UBERON:0003075!1.43e-13!86;UBERON:0007284!1.43e-13!86;UBERON:0002020!4.01e-12!34;UBERON:0003528!4.01e-12!34;UBERON:0001893!7.71e-12!34;UBERON:0002791!1.26e-11!33;UBERON:0001869!1.95e-11!32;UBERON:0003056!1.08e-10!61;UBERON:0000956!3.85e-09!25;UBERON:0000203!3.85e-09!25;UBERON:0002619!1.62e-08!22;UBERON:0001950!1.67e-07!20;UBERON:0000033!2.00e-07!123;UBERON:0000924!2.96e-07!173;UBERON:0006601!2.96e-07!173;UBERON:0000153!4.21e-07!129;UBERON:0007811!4.21e-07!129;UBERON:0004121!8.46e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.62e-12;41!UBERON:0001890;2.62e-12;41!UBERON:0003528;1.07e-11;34!UBERON:0002020;1.07e-11;34!UBERON:0001869;1.64e-11;32!UBERON:0001893;2.05e-11;34!UBERON:0002791;2.85e-11;32!UBERON:0000073;1.22e-10;53!UBERON:0002616;1.22e-10;53!UBERON:0000956;8.03e-10;25!UBERON:0000203;8.03e-10;25!UBERON:0002619;7.07e-09;22!UBERON:0001017;7.25e-08;75!UBERON:0000955;8.86e-08;68!UBERON:0001950;9.43e-08;20!UBERON:0001016;4.61e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.54e-20,81;UBERON:0001016,2.14e-18,89;UBERON:0001049,1.11e-17,56;UBERON:0005068,1.11e-17,56;UBERON:0006241,1.11e-17,56;UBERON:0007135,1.11e-17,56;UBERON:0000073,4.07e-17,53;UBERON:0002616,4.07e-17,53;UBERON:0000955,6.87e-17,68;UBERON:0006238,6.87e-17,68;UBERON:0002780,1.29e-16,41;UBERON:0001890,1.29e-16,41;UBERON:0003080,1.29e-16,41;UBERON:0006240,1.29e-16,41;UBERON:0002346,2.80e-14,86;UBERON:0003075,1.29e-13,82;UBERON:0007284,1.29e-13,82;UBERON:0003528,1.67e-13,34;UBERON:0002020,1.67e-13,34;UBERON:0001893,3.51e-13,34;UBERON:0001869,9.99e-13,32;UBERON:0003056,1.28e-12,61;UBERON:0002791,2.54e-12,32;UBERON:0000956,3.94e-10,25;UBERON:0000203,3.94e-10,25;UBERON:0002619,2.00e-09,22;UBERON:0001950,2.78e-08,20;UBERON:0011216,3.19e-08,223;UBERON:0010314,3.95e-08,132;UBERON:0010371,1.12e-07,104;UBERON:0007023,8.95e-07,114 | |||
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| ||
|short_description=p1@C2orf77 | |short_description=p1@C2orf77 | ||
}} | }} |
Latest revision as of 02:32, 18 September 2015
Short description: | p1@C2orf77 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C2orf77_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_NM_001085447, uc002ufe.2, uc002uff.2_5end |
EntrezGene: | C2orf77 |
HGNC: | 25064 |
UniProt: | B4DX81Q0VFZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.54e-20 | 81 |
nervous system | 2.14e-18 | 89 |
neural tube | 1.11e-17 | 56 |
neural rod | 1.11e-17 | 56 |
future spinal cord | 1.11e-17 | 56 |
neural keel | 1.11e-17 | 56 |
regional part of nervous system | 4.07e-17 | 53 |
regional part of brain | 4.07e-17 | 53 |
brain | 6.87e-17 | 68 |
future brain | 6.87e-17 | 68 |
regional part of forebrain | 1.29e-16 | 41 |
forebrain | 1.29e-16 | 41 |
anterior neural tube | 1.29e-16 | 41 |
future forebrain | 1.29e-16 | 41 |
neurectoderm | 2.80e-14 | 86 |
neural plate | 1.29e-13 | 82 |
presumptive neural plate | 1.29e-13 | 82 |
brain grey matter | 1.67e-13 | 34 |
gray matter | 1.67e-13 | 34 |
telencephalon | 3.51e-13 | 34 |
cerebral hemisphere | 9.99e-13 | 32 |
pre-chordal neural plate | 1.28e-12 | 61 |
regional part of telencephalon | 2.54e-12 | 32 |
cerebral cortex | 3.94e-10 | 25 |
pallium | 3.94e-10 | 25 |
regional part of cerebral cortex | 2.00e-09 | 22 |
neocortex | 2.78e-08 | 20 |
organ system subdivision | 3.19e-08 | 223 |
structure with developmental contribution from neural crest | 3.95e-08 | 132 |
ecto-epithelium | 1.12e-07 | 104 |
adult organism | 8.95e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.34e-08 | 143 |
carcinoma | 7.72e-07 | 106 |