FFCP PHASE1:Hg19::chr14:21249200..21249248,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:21249200..21249248,+
|short_description=p1@RNASE6
|description=CAGE_peak_1_at_RNASE6_5end
|association_with_transcript=0bp_to_ENST00000304677,NM_005615,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6039 | |EntrezGene=6039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10048 | |HGNC=10048 | ||
|TSSclassifier=strong | |||
|UniProt=Q93091,Q6IB39 | |UniProt=Q93091,Q6IB39 | ||
|association_with_transcript=0bp_to_ENST00000304677,NM_005615,uc001vye.3_5end | |||
|cluster_id=chr14:21249200..21249248,+ | |||
|coexpression_cluster_id=C691 | |||
|description=CAGE_peak_1_at_RNASE6_5end | |||
|id=chr14:21249200..21249248,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.89e-59!172;CL:0000566!2.89e-59!172;CL:0000738!2.25e-56!140;CL:0002032!1.41e-54!165;CL:0000837!1.41e-54!165;CL:0000988!2.01e-52!182;CL:0002087!5.15e-48!119;CL:0002031!3.67e-46!124;CL:0000763!1.95e-38!112;CL:0000049!1.95e-38!112;CL:0000766!7.75e-37!76;CL:0002009!1.05e-33!65;CL:0000557!1.72e-32!71;CL:0002194!1.79e-32!63;CL:0000576!1.79e-32!63;CL:0000040!1.79e-32!63;CL:0000559!1.79e-32!63;CL:0000839!3.61e-31!70;CL:0002057!1.13e-27!42;CL:0000860!2.18e-24!45;CL:0000542!8.62e-14!53;CL:0000051!8.62e-14!53;CL:0000838!1.88e-13!52;CL:0000945!4.33e-10!24;CL:0000826!4.33e-10!24;CL:0000236!1.37e-09!14;CL:0000094!6.71e-07!8;CL:0000451!7.72e-07!10;CL:0000134!8.54e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.42e-24;39!CL:0000234;1.42e-24;39!CL:0000860;1.12e-23;33!CL:0002057;1.12e-23;33!CL:0000576;6.20e-22;48!CL:0000766;2.09e-17;69!CL:0002087;1.24e-12;104!CL:0000738;2.13e-12;136!CL:0000763;4.78e-12;100!CL:0000236;2.45e-10;13!CL:0000945;1.00e-09;24!CL:0000988;3.04e-08;177!CL:0000094;1.59e-07;8!CL:0000235;4.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.43e-52,136;CL:0000037,2.36e-50,168;CL:0002087,2.63e-46,115;CL:0002032,1.40e-45,161;CL:0000837,1.40e-45,161;CL:0000988,3.31e-45,177;CL:0000766,4.67e-44,72;CL:0002009,2.23e-42,61;CL:0002031,1.03e-41,120;CL:0002194,5.47e-41,59;CL:0000576,5.47e-41,59;CL:0000040,5.47e-41,59;CL:0000559,5.47e-41,59;CL:0000557,4.63e-39,67;CL:0000763,1.89e-37,108;CL:0000049,1.89e-37,108;CL:0000473,2.10e-36,48;CL:0000234,2.10e-36,48;CL:0000839,1.00e-35,66;CL:0000860,1.02e-30,42;CL:0002057,1.02e-30,42;CL:0000236,1.60e-10,14;CL:0000945,1.14e-09,24;CL:0000826,1.14e-09,24;CL:0000542,3.69e-08,53;CL:0000051,3.69e-08,53;CL:0000838,7.64e-08,52;CL:0000094,1.60e-07,8;CL:0000235,4.17e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-22;42!CL:0000049;1.58e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-43!115;UBERON:0002390!2.94e-36!102;UBERON:0003061!2.94e-36!102;UBERON:0002193!5.64e-32!112;UBERON:0002371!5.31e-28!80;UBERON:0001474!6.04e-24!86;UBERON:0002405!1.33e-20!115;UBERON:0004765!2.08e-17!101;UBERON:0001434!2.08e-17!101;UBERON:0001049!4.76e-13!57;UBERON:0005068!4.76e-13!57;UBERON:0006241!4.76e-13!57;UBERON:0007135!4.76e-13!57;UBERON:0003080!8.30e-11!42;UBERON:0002780!2.39e-10!41;UBERON:0001890!2.39e-10!41;UBERON:0006240!2.39e-10!41;UBERON:0003081!2.69e-10!216;UBERON:0002616!1.27e-09!59;UBERON:0002020!2.13e-08!34;UBERON:0003528!2.13e-08!34;UBERON:0001893!2.16e-08!34;UBERON:0002791!3.53e-08!33;UBERON:0001869!1.40e-07!32;UBERON:0000955!1.88e-07!69;UBERON:0006238!1.88e-07!69;UBERON:0002619!3.94e-07!22;UBERON:0001017!4.53e-07!82;UBERON:0003075!8.17e-07!86;UBERON:0007284!8.17e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.24e-12;114!UBERON:0002780;2.41e-08;41!UBERON:0001890;2.41e-08;41!UBERON:0000073;1.52e-07;53!UBERON:0002616;1.52e-07;53!UBERON:0001893;1.61e-07;34!UBERON:0000178;1.95e-07;15!UBERON:0000179;1.95e-07;15!UBERON:0000463;1.95e-07;15!UBERON:0003528;2.29e-07;34!UBERON:0002020;2.29e-07;34!UBERON:0002791;2.80e-07;32!UBERON:0002619;3.99e-07;22!UBERON:0001869;4.28e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.58e-45,114;UBERON:0002390,4.64e-42,98;UBERON:0003061,4.64e-42,98;UBERON:0002193,1.31e-37,108;UBERON:0002371,4.43e-34,76;UBERON:0002405,7.60e-31,93;UBERON:0001474,1.46e-29,82;UBERON:0004765,1.47e-24,90;UBERON:0001434,2.52e-20,100;UBERON:0001049,1.15e-13,56;UBERON:0005068,1.15e-13,56;UBERON:0006241,1.15e-13,56;UBERON:0007135,1.15e-13,56;UBERON:0003081,1.60e-13,203;UBERON:0000073,2.17e-12,53;UBERON:0002616,2.17e-12,53;UBERON:0002780,5.91e-11,41;UBERON:0001890,5.91e-11,41;UBERON:0003080,5.91e-11,41;UBERON:0006240,5.91e-11,41;UBERON:0003528,8.58e-09,34;UBERON:0002020,8.58e-09,34;UBERON:0001893,8.70e-09,34;UBERON:0000955,3.45e-08,68;UBERON:0006238,3.45e-08,68;UBERON:0002791,3.97e-08,32;UBERON:0001017,4.99e-08,81;UBERON:0001869,6.75e-08,32;UBERON:0003075,1.14e-07,82;UBERON:0007284,1.14e-07,82;UBERON:0000178,1.93e-07,15;UBERON:0000179,1.93e-07,15;UBERON:0000463,1.93e-07,15;UBERON:0000479,3.19e-07,773;UBERON:0002619,3.95e-07,22;UBERON:0002204,9.42e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,4.03395087871065,0,0,0,0,0,0,0,0,0,5.19611159086069,3.03772180964799,3.14843125254717,82.2131338614209,67.9378034632066,85.3036839471579,0,0,0,0.697204805222715,0.710846162437108,22.3136333894484,79.7753388285903,66.580756560087,47.7423915574874,413.79579639538,375.068865249978,456.166330280144,132.603193766963,65.7504142018528,49.0019803599389,88.7878920979715,48.5178107865754,47.6947811178459,75.3754067884034,57.8923196755767,58.8840752422577,89.9786226722574,59.384590889712,62.2961838333972,97.8860165621544,53.2166992612799,49.6638900623637,99.4772650205433,56.1625797383164,46.67161018333,73.226988641451,66.2219343303818,38.3602275479425,67.6187526004601,39.7169657283798,31.7639346987743,77.8870862295904,61.5349843735838,68.848863771522,66.5939452896706,50.0857584943088,58.5455416765636,58.7289695947198,59.1039953902821,89.1049243410598,236.676425825665,230.972061190237,139.509809253066,1.99508920618874,5.37075028437543,2.19196984517561,153.116732681351,159.472474488542,193.023508088391,221.472985512017,233.430860441995,145.412367308484,157.328679722797,150.740493216588,46.6754634669748,26.4256735216922,27.5236724250165,1.32171328579026,14.5732226375199,35.2934673598603,0.786839080455332,1.17903228824749,2.46721798799411,0.501559486172034,0.651844533267181,0,0,3.23090324967003,0.589211814949674,0.664601683750863,0,0.640456598628376,1.04047478047903,7.07082989795807,7.18510046243206,10.1431080007268,1.63115219478266,1.60524496853828,1.04535523804977,7.59172596073693,2.68254345521345,6.18529401868734,2.53019692019503,7.00843911513013,1.95325036156926,2.85135613334512,16.8644133367106,9.85496905889022,14.9916871862815,16.1008531389931,0.821127996921047,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.175669571386252,6.81091192588106,0,0,218.420395929602,235.945794040507,260.464644656457,170.282305754014,225.36599484737,161.584013078361,0.198762407366705,0.860234595106124,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,1.89853131913626,0,38.2163210564583,62.0448422637321,0,0,0,0,0,4.25602058638028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0.738155454624648,0,0,0,2.53510069643662,7.86261773342101,4.13552934676983,2.6487785964879,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,323.036711986665,127.298320235745,175.533402662988,0,0,0,0,0,0,0,0.088048434013226,1.03664057770386,1.15295962733569,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,536.36087262765,392.262788408491,261.434084958959,0,0,0,0,0,0,0.112085143993527,8.27529192848094,0.215627574859517,7.31555306794566,0,0,0,3.51784157202132,0,26.9642528620986,95.731666945288,143.802183162304,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,53.9664548180736,60.3999762292127,33.7259082658884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385076685522074,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0.438519753291869,0.784306353074702,0,0,0,18.4443410849423,0,0,0,0,0,0,0,0,0,0.107420244868274,0,1.61930592090592,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.12594045629425,0,0,0,0,0,0.211107635297664,0,0,0,0,2.01090682660736,0,17.9814659483648,0,0,0,0,94.3852553171835,86.4040044070884,58.1040130917646,86.0016709402618,99.9610323599452,73.9259574759698,73.4442754643836,62.6568889272474,0,0,0,8.36114288065734,2.01976898167023,0.426851060090485,1.4348364545594,2.19537308576098,10.5327953572802,1.2700414963433,0.324621940274555,0.561594356226918,13.9223154210247,1.56679895773023,5.01268954180134,0.50787533340481,66.804639243139,18.9691724759585,87.2984787265169,9.61814965316141,1.53620382154229,3.80249383417107,3.8375302593739,4.88470238505101,0,0,0,0.99921590399346,2.81974010175699,0,42.0478474510336,0,0,0,1.19372242368845,2.37571744666111,0,7.95318118213038,12.9415863097672,0,0.494411622680279,0,10.9586393538088,30.1149467928951,0,0,1.6001024709939,0,0,0,45.0183685799647,14.0073636004446,50.2914493928574,0,1.93866549219044,8.44189693272846,3.99227596002388,0,0,24.649985564783,0,0,0,0,0.583209226766509,0,9.74315524395223,9.28592577415641,1.52581736317083,4.31259113731776,2.36438095162838,4.38770794307945,0,0,8.0028268843949,0,0,0,0,2.23300811812344,0.732780747214898,10.6606955203727,9.19739683761629,1.09886179476517,1.66211681900156,0,0,0.167821586975843,0,4.60916079043098,0,0,0.141353071433941,0,7.96209544862804,13.5340073690109,15.8867837682743,0,0,0,13.2780231971934,6.42062117839031,8.19925560038687,2.37191225980366,0,0,8.2862724598372,13.308978765353,1.53036380815245,28.5603339920766,0,0,0,0,0,0,0,0,0,0,0,24.2870068856422,0,0,0,0,6.30428607174726,0,7.23138370497704,0,0,4.05189094117624,0,0,11.7399147106644,0,0,0,0,0,0,0,0,0,0,0,7.20504346451747,18.892942287095,1.277465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| ||
|short_description=p1@RNASE6 | |||
}} | }} |
Latest revision as of 00:24, 19 September 2015
Short description: | p1@RNASE6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNASE6_5end |
Coexpression cluster: | C691_Monocytederived_CD14_Macrophage_CD19_Dendritic_immature_Whole |
Association with transcript: | 0bp_to_ENST00000304677, NM_005615, uc001vye.3_5end |
EntrezGene: | RNASE6 |
HGNC: | 10048 |
UniProt: | Q93091Q6IB39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.43e-52 | 136 |
hematopoietic stem cell | 2.36e-50 | 168 |
nongranular leukocyte | 2.63e-46 | 115 |
hematopoietic oligopotent progenitor cell | 1.40e-45 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-45 | 161 |
hematopoietic cell | 3.31e-45 | 177 |
myeloid leukocyte | 4.67e-44 | 72 |
macrophage dendritic cell progenitor | 2.23e-42 | 61 |
hematopoietic lineage restricted progenitor cell | 1.03e-41 | 120 |
monopoietic cell | 5.47e-41 | 59 |
monocyte | 5.47e-41 | 59 |
monoblast | 5.47e-41 | 59 |
promonocyte | 5.47e-41 | 59 |
granulocyte monocyte progenitor cell | 4.63e-39 | 67 |
myeloid cell | 1.89e-37 | 108 |
common myeloid progenitor | 1.89e-37 | 108 |
defensive cell | 2.10e-36 | 48 |
phagocyte | 2.10e-36 | 48 |
myeloid lineage restricted progenitor cell | 1.00e-35 | 66 |
classical monocyte | 1.02e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-30 | 42 |
B cell | 1.60e-10 | 14 |
lymphocyte of B lineage | 1.14e-09 | 24 |
pro-B cell | 1.14e-09 | 24 |
lymphocyte | 3.69e-08 | 53 |
common lymphoid progenitor | 3.69e-08 | 53 |
lymphoid lineage restricted progenitor cell | 7.64e-08 | 52 |
granulocyte | 1.60e-07 | 8 |
macrophage | 4.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.58e-45 | 114 |
hematopoietic system | 4.64e-42 | 98 |
blood island | 4.64e-42 | 98 |
hemolymphoid system | 1.31e-37 | 108 |
bone marrow | 4.43e-34 | 76 |
immune system | 7.60e-31 | 93 |
bone element | 1.46e-29 | 82 |
skeletal element | 1.47e-24 | 90 |
skeletal system | 2.52e-20 | 100 |
neural tube | 1.15e-13 | 56 |
neural rod | 1.15e-13 | 56 |
future spinal cord | 1.15e-13 | 56 |
neural keel | 1.15e-13 | 56 |
lateral plate mesoderm | 1.60e-13 | 203 |
regional part of nervous system | 2.17e-12 | 53 |
regional part of brain | 2.17e-12 | 53 |
regional part of forebrain | 5.91e-11 | 41 |
forebrain | 5.91e-11 | 41 |
anterior neural tube | 5.91e-11 | 41 |
future forebrain | 5.91e-11 | 41 |
brain grey matter | 8.58e-09 | 34 |
gray matter | 8.58e-09 | 34 |
telencephalon | 8.70e-09 | 34 |
brain | 3.45e-08 | 68 |
future brain | 3.45e-08 | 68 |
regional part of telencephalon | 3.97e-08 | 32 |
central nervous system | 4.99e-08 | 81 |
cerebral hemisphere | 6.75e-08 | 32 |
neural plate | 1.14e-07 | 82 |
presumptive neural plate | 1.14e-07 | 82 |
blood | 1.93e-07 | 15 |
haemolymphatic fluid | 1.93e-07 | 15 |
organism substance | 1.93e-07 | 15 |
tissue | 3.19e-07 | 773 |
regional part of cerebral cortex | 3.95e-07 | 22 |
musculoskeletal system | 9.42e-07 | 167 |