FFCP PHASE1:Hg19::chr14:106321203..106321218,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:106321203..106321218,+
|short_description=p@chr14:106321203..106321218,+
|description=CAGE_peak_at_chr14:106321203..106321218,+
|association_with_transcri...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:106321203..106321218,+ | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_at_chr14:106321203..106321218,+ | |||
|id=chr14:106321203..106321218,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.65e-51!24;CL:0000826!1.65e-51!24;CL:0000236!2.94e-24!14;CL:0000542!4.20e-23!53;CL:0000051!4.20e-23!53;CL:0000838!4.80e-21!52;CL:0002087!1.75e-11!119;CL:0000037!2.82e-10!172;CL:0000566!2.82e-10!172;CL:0000988!2.43e-09!182;CL:0000738!6.46e-09!140;CL:0002032!2.42e-08!165;CL:0000837!2.42e-08!165;CL:0002031!8.66e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.24e-49;24!CL:0000542;1.53e-16;53!CL:0000236;1.89e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.08e-49,24;CL:0000826,7.08e-49,24;CL:0000542,1.56e-25,53;CL:0000051,1.56e-25,53;CL:0000838,9.64e-22,52;CL:0002087,1.22e-12,115;CL:0000236,1.34e-11,14;CL:0000738,2.17e-10,136;CL:0002031,4.25e-10,120;CL:0002032,1.82e-08,161;CL:0000837,1.82e-08,161;CL:0000037,4.96e-08,168;CL:0000988,1.61e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.53e-16;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;8.62e-12;1!DOID:0060058;9.28e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,8.62e-12,1;DOID:0060058,8.74e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.46e-10!15;UBERON:0000179!1.46e-10!15;UBERON:0000463!1.46e-10!15;UBERON:0007023!3.45e-08!115;UBERON:0004177!3.72e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.28e-14;3!UBERON:0000029;1.24e-11;1!UBERON:0002372;4.44e-11;1!UBERON:0001961;4.44e-11;1!UBERON:0001744;4.44e-11;1!UBERON:0001042;4.44e-11;1!UBERON:0001735;4.44e-11;1!UBERON:0004177;8.01e-09;5!UBERON:0005057;8.01e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.42e-14,3;UBERON:0004854,4.42e-14,3;UBERON:0009034,4.42e-14,3;UBERON:0002095,4.42e-14,3;UBERON:0004782,4.42e-14,3;UBERON:0003281,4.42e-14,3;UBERON:0009664,4.42e-14,3;UBERON:0002296,4.42e-14,3;UBERON:0005602,4.42e-14,3;UBERON:0001179,4.42e-14,3;UBERON:0006293,4.42e-14,3;UBERON:0000029,1.18e-11,1;UBERON:0002372,4.91e-11,1;UBERON:0001961,4.91e-11,1;UBERON:0001744,4.91e-11,1;UBERON:0001735,4.91e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05653622991805,2.38091709404843,3.38456359648821,0,0,0,0,0,0,6.58471204932564,3.41206157969812,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.853460445133014,0,1.14950487990897,2.64417949113945,0.954053754535364,5.69212969109448,0.587237189370939,1.52909291250092,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.952927101831156,1.64544909234478,0,0.540031437238115,0,0,0,0,12.8204190836746,0.865615277858669,0,0,0.199579371432817,0,0.211673582723883,0,0,0.456469358066384,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,8.12359716043058,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.828478110694391,5.95399226174341,0,3.53198535304598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00326405540328,0.218559560503957,0,0,0,0,0,0,0,2.91350145737546,1.03132620757723,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,1.0776328482334,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05653622991805,2.38091709404843,3.38456359648821,0,0,0,0,0,0,6.58471204932564,3.41206157969812,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.853460445133014,0,1.14950487990897,2.64417949113945,0.954053754535364,5.69212969109448,0.587237189370939,1.52909291250092,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.952927101831156,1.64544909234478,0,0.540031437238115,0,0,0,0,12.8204190836746,0.865615277858669,0,0,0.199579371432817,0,0.211673582723883,0,0,0.456469358066384,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,8.12359716043058,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.828478110694391,5.95399226174341,0,3.53198535304598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00326405540328,0.218559560503957,0,0,0,0,0,0,0,2.91350145737546,1.03132620757723,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,1.0776328482334,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p@chr14:106321203..106321218,+ | |||
}} | }} |
Latest revision as of 18:40, 24 July 2015
Short description: | p@chr14:106321203..106321218, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106321203..106321218, + |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.08e-49 | 24 |
pro-B cell | 7.08e-49 | 24 |
lymphocyte | 1.56e-25 | 53 |
common lymphoid progenitor | 1.56e-25 | 53 |
lymphoid lineage restricted progenitor cell | 9.64e-22 | 52 |
nongranular leukocyte | 1.22e-12 | 115 |
B cell | 1.34e-11 | 14 |
leukocyte | 2.17e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 4.25e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.82e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-08 | 161 |
hematopoietic stem cell | 4.96e-08 | 168 |
hematopoietic cell | 1.61e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.42e-14 | 3 |
gastrointestinal system mesentery | 4.42e-14 | 3 |
stomach region | 4.42e-14 | 3 |
mesentery | 4.42e-14 | 3 |
gastrointestinal system serosa | 4.42e-14 | 3 |
mesentery of stomach | 4.42e-14 | 3 |
gut mesentery | 4.42e-14 | 3 |
dorsal mesentery | 4.42e-14 | 3 |
dorsal mesogastrium | 4.42e-14 | 3 |
peritoneal cavity | 4.42e-14 | 3 |
spleen primordium | 4.42e-14 | 3 |
lymph node | 1.18e-11 | 1 |
tonsil | 4.91e-11 | 1 |
mucosa-associated lymphoid tissue | 4.91e-11 | 1 |
lymphoid tissue | 4.91e-11 | 1 |
tonsillar ring | 4.91e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 8.62e-12 | 1 |
lymphoma | 8.74e-10 | 10 |