FFCP PHASE1:Hg19::chr8:108510137..108510152,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284 | |EntrezGene=284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=484 | |HGNC=484 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_ENST00000517746_5end | |association_with_transcript=85bp_to_ENST00000517746_5end | ||
|cluster_id=chr8:108510137..108510152,- | |||
|coexpression_cluster_id=C4717 | |||
|description=CAGE_peak_1_at_ANGPT1_5end | |description=CAGE_peak_1_at_ANGPT1_5end | ||
|id=chr8:108510137..108510152,- | |id=chr8:108510137..108510152,- | ||
|ontology_enrichment_celltype=CL:0000055!9.01e-20!180;CL:0000057!6.03e-11!75;CL:0000680!4.12e-10!57;CL:0000056!4.12e-10!57;CL:0000355!4.12e-10!57;CL:0000187!5.43e-09!54;CL:0000136!2.51e-08!15;CL:0002620!5.17e-08!23;CL:0000183!6.45e-08!59;CL:0000393!6.78e-08!60;CL:0000211!6.78e-08!60;CL:0000192!1.10e-07!42;CL:0000514!1.10e-07!42 | |ontology_enrichment_celltype=CL:0000055!9.01e-20!180;CL:0000057!6.03e-11!75;CL:0000680!4.12e-10!57;CL:0000056!4.12e-10!57;CL:0000355!4.12e-10!57;CL:0000187!5.43e-09!54;CL:0000136!2.51e-08!15;CL:0002620!5.17e-08!23;CL:0000183!6.45e-08!59;CL:0000393!6.78e-08!60;CL:0000211!6.78e-08!60;CL:0000192!1.10e-07!42;CL:0000514!1.10e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.75e-08;13!CL:0002620;2.36e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.69e-10,76;CL:0000136,2.71e-09,15;CL:0000680,5.23e-09,58;CL:0000056,5.23e-09,58;CL:0000355,5.23e-09,58;CL:0000187,7.58e-08,55;CL:0000192,9.79e-08,43;CL:0000514,9.79e-08,43;CL:0002620,2.28e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-13!115;UBERON:0000914!3.31e-13!83;UBERON:0002329!3.31e-13!83;UBERON:0003077!3.31e-13!83;UBERON:0003059!3.31e-13!83;UBERON:0007282!3.31e-13!83;UBERON:0009618!3.31e-13!83;UBERON:0007285!3.31e-13!83;UBERON:0000475!2.91e-12!365;UBERON:0002385!8.98e-12!63;UBERON:0001015!8.98e-12!63;UBERON:0000383!8.98e-12!63;UBERON:0001134!2.39e-11!61;UBERON:0002036!2.39e-11!61;UBERON:0003082!2.39e-11!61;UBERON:0004290!4.63e-11!70;UBERON:0000486!1.61e-08!82;UBERON:0003102!1.29e-07!95;UBERON:0002616!1.95e-07!59;UBERON:0000481!4.52e-07!347;UBERON:0001017!4.93e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,8.74e-11,64;UBERON:0001015,8.74e-11,64;UBERON:0000383,8.74e-11,64;UBERON:0007023,1.80e-10,114;UBERON:0001134,2.55e-10,62;UBERON:0002036,2.55e-10,62;UBERON:0003082,2.55e-10,62;UBERON:0007524,1.01e-09,73;UBERON:0003077,2.11e-09,72;UBERON:0007285,2.11e-09,72;UBERON:0002329,3.67e-09,71;UBERON:0003059,3.67e-09,71;UBERON:0007282,3.67e-09,71;UBERON:0004290,3.67e-09,71;UBERON:0009618,3.67e-09,71;UBERON:0003102,2.31e-07,99;UBERON:0007503,5.17e-07,78;UBERON:0000486,7.90e-07,83 | |||
|phase1_expression=25.6166514771485,31.4727770119745,9.58489947852604,33.024188456533,5.81049422755474,2.61701557230111,43.0609792886128,6.31719873426831,1.56711376919903,0,0,0,0,19.6788501206474,11.930305526205,2.6893005858071,2.41077811209591,0,5.36726078669558,0.369363174230364,0,0.313454721478088,7.15589967827642,2.05311637609326,1.25542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,17.322425920756,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0.112328631146495,0.450530678524519,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,3.92355994087075,6.32121803460185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,0,0.895037932904712,5.42158728576849,17.5468268722561,13.4707262633566,8.74814541756209,2.43317435151318,2.3633704291017,0.886917589850256,0.351339142772504,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,1.31780417436063,0,0,1.98788780678127,2.78587125662075,26.8790637050834,11.1866282092037,1.06400514659507,0.560677600142307,0,0.98667019366864,10.8923862389918,1.34710672069688,1.14423332179421,7.87058623753643,23.62321290368,0,0,0,0.747243402759005,0.352303495931295,0.809364721840658,0.140450806702248,3.0623125688234,0.61417158655884,1.96318984233954,114.048274299077,51.9260551484969,0.910161361938026,0,1.5150250255866,1.25118519871964,2.77064115484183,42.1418516045604,20.2281945227353,41.6159423171273,0.226864366320042,40.0038887586162,95.6737101907182,30.3062618658173,24.3073787828366,50.3926867975966,31.1745053455211,34.2455015650125,25.8227788329137,21.1438301199801,23.7287747789468,96.1000941825605,7.75901072730297,142.003837006646,67.503905812519,6.10418132317755,0,0,0,0.365921118388786,0,0.929551542956147,1.24393266018445,0.504641701751257,1.09493207722749,20.3384392028761,22.513432836751,2.76269842704961,111.448302727675,37.5377330468185,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,1.3725424823882,0,0,0,0,0,0,0,1.27523445472584,7.0445216541493,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.411309970813294,0,0,0,2.1798003441664,0.51336800074665,3.61960804121778,0,0.845302752556,35.3697695057878,9.36066932202295,7.71622122786426,0,1.0656887160644,89.7901800173167,15.7360265563518,4.11620168390384,0.65147236858747,71.0783897485092,4.75171123760058,6.33022691825131,2.61460037580088,0.399891964728228,0,0,0,4.55287225434007,0,4.27910715122155,10.7138166934009,13.7669136108757,10.3855358679139,0,0.197030760201927,0,0,1.27047312111232,1.30139853857622,0,0.502548796003046,1.91381625495949,5.24304916763028,0,2.48649308061621,53.3707988978258,18.0061387581484,18.7172866352818,5.61521326133179,12.133171238207,19.23969463414,31.5110406330398,24.0756879782175,4.5481500811197,3.10419213877515,4.64957918974806,0,11.9899387965954,0.783204629850962,0.686286847621712,0,0,0,0,0,0.30239029332968,6.4508030032882,89.7752543735165,17.1202657604175,0.896974044789907,77.7795018581389,0.965123526861645,1.48418066444991,1.07946785661859,1.24293207719189,5.17401082886998,7.2695620085707,1.74315567689939,0.362578348774867,0,0,15.2703216058927,15.4777492805709,13.899187985699,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0.650756789328606,25.1420068420442,4.48690377609883,5.44562699475881,0,0,6.42735719376638,2.90012154876366,0.924291702687866,0.614014698904518,0.964856007391714,33.8373771335062,7.39585138962565,1.53407929348982,4.27353771104339,0,0,0,0,4.18360994367557,32.1108593767253,2.0911118104818,0.616067160352178,3.72614221221915,2.60979897622522,2.22389062924704,2.00374841438788,3.34942532423701,18.3500066336861,11.6284418293533,1.27948895655667,11.5543526769159,1.27281299170375,0,16.9080110128316,1.92175920815238,1.88499843753098,4.65019707618627,22.1914449642212,1.26377536871694,0.975267478179181,7.55511817856982,4.22600587027022,15.9704896347343,10.6054073965285,3.39024349860728,4.96228809191512,14.5956574553068,4.38450885253763,1.15755106853338,9.18252652865286,0.608731130888112,0,0.563391205064483,5.16280867934585,17.0953331362831,2.49669736036875,2.12856638442359,10.9775970354785,7.24448764511784,0,0.349934720244983,0,0,0,23.9125253973019,0,0,0,0,0.507447609232169,0,0,1.19115887728894,1.64544909234478,0,0.540031437238115,1.58625035258854,0.213648142254946,0,0,0,0,0,0,5.78780177155168,33.5134397731642,15.6638451215673,2.59697552219644,2.24637742490767,0,0,0,20.6535968917956,0,0,0,1.03051603426729,0,0,0,0,17.5395889554003,3.69262196843137,14.0636952807511,3.3307196799782,1.4098700508785,0,19.4855878431619,0,0,0,0,0.296964680832639,0,3.97659059106519,2.2507106625682,3.11664374064136,0,0,4.78195171802567,5.24939439509181,0,0.715880777515084,0,9.33118762985422,0,0,0,5.42538731003135,0,56.6798649737648,0,2.13366625772258,0,0,0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| ||
|short_description=p1@ANGPT1 | |short_description=p1@ANGPT1 | ||
}} | }} |
Latest revision as of 02:59, 25 September 2015
Short description: | p1@ANGPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ANGPT1_5end |
Coexpression cluster: | C4717_small_Fibroblast_Hair_lung_Mesenchymal_Preadipocyte_mature |
Association with transcript: | 85bp_to_ENST00000517746_5end |
EntrezGene: | ANGPT1 |
HGNC: | 484 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.69e-10 | 76 |
fat cell | 2.71e-09 | 15 |
muscle precursor cell | 5.23e-09 | 58 |
myoblast | 5.23e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.23e-09 | 58 |
muscle cell | 7.58e-08 | 55 |
smooth muscle cell | 9.79e-08 | 43 |
smooth muscle myoblast | 9.79e-08 | 43 |
skin fibroblast | 2.28e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 8.74e-11 | 64 |
musculature | 8.74e-11 | 64 |
musculature of body | 8.74e-11 | 64 |
adult organism | 1.80e-10 | 114 |
skeletal muscle tissue | 2.55e-10 | 62 |
striated muscle tissue | 2.55e-10 | 62 |
myotome | 2.55e-10 | 62 |
dense mesenchyme tissue | 1.01e-09 | 73 |
paraxial mesoderm | 2.11e-09 | 72 |
presumptive paraxial mesoderm | 2.11e-09 | 72 |
somite | 3.67e-09 | 71 |
presomitic mesoderm | 3.67e-09 | 71 |
presumptive segmental plate | 3.67e-09 | 71 |
dermomyotome | 3.67e-09 | 71 |
trunk paraxial mesoderm | 3.67e-09 | 71 |
surface structure | 2.31e-07 | 99 |
epithelial vesicle | 5.17e-07 | 78 |
multilaminar epithelium | 7.90e-07 | 83 |