FFCP PHASE1:Hg19::chr2:136873735..136873748,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7852 | |EntrezGene=7852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2561 | |HGNC=2561 | ||
|TSSclassifier=strong | |||
|UniProt=P61073 | |UniProt=P61073 | ||
|association_with_transcript=64bp_to_ENST00000409817,NM_001008540,uc002tuy.2_5end | |association_with_transcript=64bp_to_ENST00000409817,NM_001008540,uc002tuy.2_5end | ||
|cluster_id=chr2:136873735..136873748,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_CXCR4_5end | |description=CAGE_peak_7_at_CXCR4_5end | ||
|id=chr2:136873735..136873748,- | |id=chr2:136873735..136873748,- | ||
|ontology_enrichment_celltype=CL:0000738!2.99e-46!140;CL:0002087!4.28e-39!119;CL:0002057!5.28e-38!42;CL:0000037!2.52e-37!172;CL:0000566!2.52e-37!172;CL:0000766!1.86e-35!76;CL:0000860!1.01e-34!45;CL:0000988!4.56e-34!182;CL:0002032!4.47e-33!165;CL:0000837!4.47e-33!165;CL:0002031!3.14e-32!124;CL:0002194!1.00e-27!63;CL:0000576!1.00e-27!63;CL:0000040!1.00e-27!63;CL:0000559!1.00e-27!63;CL:0002009!1.60e-26!65;CL:0000839!8.06e-24!70;CL:0000557!2.51e-23!71;CL:0000763!7.59e-23!112;CL:0000049!7.59e-23!112;CL:0000094!1.78e-15!8;CL:0002393!6.96e-11!9;CL:0002397!6.96e-11!9;CL:0000081!1.05e-10!11;CL:0000838!1.05e-09!52;CL:0000542!2.06e-09!53;CL:0000051!2.06e-09!53;CL:0000791!8.11e-08!18;CL:0000789!8.11e-08!18;CL:0002420!8.11e-08!18;CL:0002419!8.11e-08!18;CL:0000790!8.11e-08!18;CL:0000624!1.46e-07!6;CL:0000134!1.58e-07!358;CL:0000775!4.43e-07!3;CL:0002320!4.67e-07!365 | |ontology_enrichment_celltype=CL:0000738!2.99e-46!140;CL:0002087!4.28e-39!119;CL:0002057!5.28e-38!42;CL:0000037!2.52e-37!172;CL:0000566!2.52e-37!172;CL:0000766!1.86e-35!76;CL:0000860!1.01e-34!45;CL:0000988!4.56e-34!182;CL:0002032!4.47e-33!165;CL:0000837!4.47e-33!165;CL:0002031!3.14e-32!124;CL:0002194!1.00e-27!63;CL:0000576!1.00e-27!63;CL:0000040!1.00e-27!63;CL:0000559!1.00e-27!63;CL:0002009!1.60e-26!65;CL:0000839!8.06e-24!70;CL:0000557!2.51e-23!71;CL:0000763!7.59e-23!112;CL:0000049!7.59e-23!112;CL:0000094!1.78e-15!8;CL:0002393!6.96e-11!9;CL:0002397!6.96e-11!9;CL:0000081!1.05e-10!11;CL:0000838!1.05e-09!52;CL:0000542!2.06e-09!53;CL:0000051!2.06e-09!53;CL:0000791!8.11e-08!18;CL:0000789!8.11e-08!18;CL:0002420!8.11e-08!18;CL:0002419!8.11e-08!18;CL:0000790!8.11e-08!18;CL:0000624!1.46e-07!6;CL:0000134!1.58e-07!358;CL:0000775!4.43e-07!3;CL:0002320!4.67e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.67e-38;8!CL:0000081;1.24e-27;11!CL:0000775;4.45e-20;3!CL:0000860;1.81e-19;33!CL:0002057;1.81e-19;33!CL:0000766;2.37e-15;69!CL:0000771;4.53e-14;2!CL:0000576;6.70e-14;48!CL:0000473;3.22e-13;39!CL:0000234;3.22e-13;39!CL:0000767;3.58e-09;3!CL:0000738;9.99e-08;136!CL:0000763;5.51e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.11e-38,8;CL:0000766,5.23e-33,72;CL:0000738,6.07e-30,136;CL:0000081,1.05e-27,11;CL:0000037,2.88e-23,168;CL:0002032,1.60e-22,161;CL:0000837,1.60e-22,161;CL:0000860,6.95e-22,42;CL:0002057,6.95e-22,42;CL:0000988,8.06e-22,177;CL:0000763,1.15e-20,108;CL:0000049,1.15e-20,108;CL:0000775,4.48e-20,3;CL:0000473,7.91e-19,48;CL:0000234,7.91e-19,48;CL:0002087,1.02e-18,115;CL:0002194,4.93e-17,59;CL:0000576,4.93e-17,59;CL:0000040,4.93e-17,59;CL:0000559,4.93e-17,59;CL:0002009,2.15e-16,61;CL:0002031,6.64e-16,120;CL:0000839,5.84e-15,66;CL:0000557,1.07e-14,67;CL:0000771,4.55e-14,2;CL:0000767,2.99e-09,3;CL:0000134,3.21e-08,354;CL:0002320,5.93e-08,361;CL:0000219,5.13e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-19;42!CL:0000049;4.44e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-31!102;UBERON:0003061!1.18e-31!102;UBERON:0002193!4.63e-30!112;UBERON:0002371!9.87e-21!80;UBERON:0002405!1.16e-18!115;UBERON:0001474!1.69e-18!86;UBERON:0004765!3.99e-14!101;UBERON:0001434!3.99e-14!101;UBERON:0003081!5.77e-14!216;UBERON:0004177!3.59e-08!7 | |ontology_enrichment_uberon=UBERON:0002390!1.18e-31!102;UBERON:0003061!1.18e-31!102;UBERON:0002193!4.63e-30!112;UBERON:0002371!9.87e-21!80;UBERON:0002405!1.16e-18!115;UBERON:0001474!1.69e-18!86;UBERON:0004765!3.99e-14!101;UBERON:0001434!3.99e-14!101;UBERON:0003081!5.77e-14!216;UBERON:0004177!3.59e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.86e-13;2!UBERON:0005058;5.86e-13;2!UBERON:0009113;5.86e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.95e-16,98;UBERON:0003061,4.95e-16,98;UBERON:0002193,3.21e-14,108;UBERON:0002405,3.17e-13,93;UBERON:0002371,1.18e-12,76;UBERON:0001474,1.54e-11,82;UBERON:0004765,2.79e-10,90;UBERON:0001434,5.44e-09,100;UBERON:0002384,1.37e-07,371;UBERON:0002370,5.89e-07,4;UBERON:0005058,5.89e-07,4;UBERON:0009113,5.89e-07,4;UBERON:0003295,5.89e-07,4;UBERON:0005562,5.89e-07,4 | |||
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|short_description=p7@CXCR4 | |short_description=p7@CXCR4 | ||
}} | }} |
Latest revision as of 03:01, 17 September 2015
Short description: | p7@CXCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CXCR4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 64bp_to_ENST00000409817, NM_001008540, uc002tuy.2_5end |
EntrezGene: | CXCR4 |
HGNC: | 2561 |
UniProt: | P61073 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.11e-38 | 8 |
myeloid leukocyte | 5.23e-33 | 72 |
leukocyte | 6.07e-30 | 136 |
blood cell | 1.05e-27 | 11 |
hematopoietic stem cell | 2.88e-23 | 168 |
hematopoietic oligopotent progenitor cell | 1.60e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-22 | 161 |
classical monocyte | 6.95e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.95e-22 | 42 |
hematopoietic cell | 8.06e-22 | 177 |
myeloid cell | 1.15e-20 | 108 |
common myeloid progenitor | 1.15e-20 | 108 |
neutrophil | 4.48e-20 | 3 |
defensive cell | 7.91e-19 | 48 |
phagocyte | 7.91e-19 | 48 |
nongranular leukocyte | 1.02e-18 | 115 |
monopoietic cell | 4.93e-17 | 59 |
monocyte | 4.93e-17 | 59 |
monoblast | 4.93e-17 | 59 |
promonocyte | 4.93e-17 | 59 |
macrophage dendritic cell progenitor | 2.15e-16 | 61 |
hematopoietic lineage restricted progenitor cell | 6.64e-16 | 120 |
myeloid lineage restricted progenitor cell | 5.84e-15 | 66 |
granulocyte monocyte progenitor cell | 1.07e-14 | 67 |
eosinophil | 4.55e-14 | 2 |
basophil | 2.99e-09 | 3 |
mesenchymal cell | 3.21e-08 | 354 |
connective tissue cell | 5.93e-08 | 361 |
motile cell | 5.13e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.95e-16 | 98 |
blood island | 4.95e-16 | 98 |
hemolymphoid system | 3.21e-14 | 108 |
immune system | 3.17e-13 | 93 |
bone marrow | 1.18e-12 | 76 |
bone element | 1.54e-11 | 82 |
skeletal element | 2.79e-10 | 90 |
skeletal system | 5.44e-09 | 100 |
connective tissue | 1.37e-07 | 371 |
thymus | 5.89e-07 | 4 |
hemolymphoid system gland | 5.89e-07 | 4 |
thymic region | 5.89e-07 | 4 |
pharyngeal gland | 5.89e-07 | 4 |
thymus primordium | 5.89e-07 | 4 |