FFCP PHASE1:Hg19::chr2:136873232..136873295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7852 | |EntrezGene=7852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2561 | |HGNC=2561 | ||
|TSSclassifier=strong | |||
|UniProt=Q5MIL4 | |UniProt=Q5MIL4 | ||
|association_with_transcript=-178bp_to_AY826773_5end | |association_with_transcript=-178bp_to_AY826773_5end | ||
|cluster_id=chr2:136873232..136873295,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_CXCR4_5end | |description=CAGE_peak_4_at_CXCR4_5end | ||
|id=chr2:136873232..136873295,- | |id=chr2:136873232..136873295,- | ||
|ontology_enrichment_celltype=CL:0000738!8.88e-61!140;CL:0000037!1.69e-54!172;CL:0000566!1.69e-54!172;CL:0002087!8.29e-53!119;CL:0000988!1.86e-51!182;CL:0002032!5.28e-49!165;CL:0000837!5.28e-49!165;CL:0002031!2.58e-45!124;CL:0000766!7.41e-28!76;CL:0002194!1.43e-24!63;CL:0000576!1.43e-24!63;CL:0000040!1.43e-24!63;CL:0000559!1.43e-24!63;CL:0000542!2.62e-24!53;CL:0000051!2.62e-24!53;CL:0002009!2.79e-24!65;CL:0000838!8.41e-24!52;CL:0000763!9.79e-24!112;CL:0000049!9.79e-24!112;CL:0002057!1.29e-23!42;CL:0000860!7.36e-23!45;CL:0000839!5.34e-21!70;CL:0000557!1.62e-20!71;CL:0000791!9.10e-14!18;CL:0000789!9.10e-14!18;CL:0002420!9.10e-14!18;CL:0002419!9.10e-14!18;CL:0000790!9.10e-14!18;CL:0000084!1.00e-13!25;CL:0000827!1.00e-13!25;CL:0000945!3.83e-09!24;CL:0000826!3.83e-09!24;CL:0000236!3.92e-09!14;CL:0000094!4.07e-09!8;CL:0000625!3.72e-08!11;CL:0000134!1.49e-07!358;CL:0000624!8.11e-07!6;CL:0002320!8.34e-07!365 | |ontology_enrichment_celltype=CL:0000738!8.88e-61!140;CL:0000037!1.69e-54!172;CL:0000566!1.69e-54!172;CL:0002087!8.29e-53!119;CL:0000988!1.86e-51!182;CL:0002032!5.28e-49!165;CL:0000837!5.28e-49!165;CL:0002031!2.58e-45!124;CL:0000766!7.41e-28!76;CL:0002194!1.43e-24!63;CL:0000576!1.43e-24!63;CL:0000040!1.43e-24!63;CL:0000559!1.43e-24!63;CL:0000542!2.62e-24!53;CL:0000051!2.62e-24!53;CL:0002009!2.79e-24!65;CL:0000838!8.41e-24!52;CL:0000763!9.79e-24!112;CL:0000049!9.79e-24!112;CL:0002057!1.29e-23!42;CL:0000860!7.36e-23!45;CL:0000839!5.34e-21!70;CL:0000557!1.62e-20!71;CL:0000791!9.10e-14!18;CL:0000789!9.10e-14!18;CL:0002420!9.10e-14!18;CL:0002419!9.10e-14!18;CL:0000790!9.10e-14!18;CL:0000084!1.00e-13!25;CL:0000827!1.00e-13!25;CL:0000945!3.83e-09!24;CL:0000826!3.83e-09!24;CL:0000236!3.92e-09!14;CL:0000094!4.07e-09!8;CL:0000625!3.72e-08!11;CL:0000134!1.49e-07!358;CL:0000624!8.11e-07!6;CL:0002320!8.34e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.50e-25;33!CL:0002057;2.50e-25;33!CL:0000473;2.62e-21;39!CL:0000234;2.62e-21;39!CL:0000576;9.71e-19;48!CL:0000766;4.37e-17;69!CL:0000094;1.24e-16;8!CL:0002087;1.37e-13;104!CL:0000738;3.35e-13;136!CL:0000236;2.28e-12;13!CL:0000624;4.88e-12;6!CL:0000081;1.45e-11;11!CL:0000791;4.67e-11;18!CL:0000789;4.67e-11;18!CL:0002419;4.67e-11;18!CL:0000542;5.39e-11;53!CL:0000763;9.18e-09;100!CL:0000084;1.21e-08;25!CL:0000775;1.61e-07;3!CL:0000988;3.12e-07;177!CL:0002393;4.16e-07;6!CL:0002397;4.16e-07;6!CL:0000767;7.36e-07;3!CL:0000898;8.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.20e-59,136;CL:0002087,2.32e-47,115;CL:0000037,8.91e-47,168;CL:0000988,2.69e-43,177;CL:0002032,4.53e-40,161;CL:0000837,4.53e-40,161;CL:0002031,2.75e-39,120;CL:0000766,8.86e-36,72;CL:0000473,2.12e-32,48;CL:0000234,2.12e-32,48;CL:0000860,1.86e-31,42;CL:0002057,1.86e-31,42;CL:0002194,2.22e-27,59;CL:0000576,2.22e-27,59;CL:0000040,2.22e-27,59;CL:0000559,2.22e-27,59;CL:0002009,3.76e-26,61;CL:0000839,2.08e-23,66;CL:0000763,5.27e-23,108;CL:0000049,5.27e-23,108;CL:0000557,6.57e-23,67;CL:0000094,1.29e-16,8;CL:0000838,3.89e-16,52;CL:0000542,1.08e-15,53;CL:0000051,1.08e-15,53;CL:0000624,4.77e-12,6;CL:0000134,6.73e-12,354;CL:0000081,1.49e-11,11;CL:0000236,2.21e-11,14;CL:0002320,2.71e-11,361;CL:0000791,4.11e-11,18;CL:0000789,4.11e-11,18;CL:0002420,4.11e-11,18;CL:0002419,4.11e-11,18;CL:0000790,4.11e-11,18;CL:0000219,3.42e-09,386;CL:0000084,1.12e-08,25;CL:0000827,1.12e-08,25;CL:0000775,1.63e-07,3;CL:0000034,3.83e-07,441;CL:0000048,4.17e-07,427;CL:0000767,7.52e-07,3;CL:0000898,7.67e-07,3;CL:0000723,9.19e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.74e-23;42!CL:0000790;4.67e-11;18!CL:0000051;5.39e-11;53!CL:0000049;9.59e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.43e-27!102;UBERON:0003061!1.43e-27!102;UBERON:0002193!1.92e-25!112;UBERON:0002371!7.04e-17!80;UBERON:0001474!2.17e-14!86;UBERON:0002405!1.80e-13!115;UBERON:0004765!3.30e-10!101;UBERON:0001434!3.30e-10!101;UBERON:0003081!1.57e-09!216;UBERON:0000178!8.41e-09!15;UBERON:0000179!8.41e-09!15;UBERON:0000463!8.41e-09!15;UBERON:0002384!9.90e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!1.43e-27!102;UBERON:0003061!1.43e-27!102;UBERON:0002193!1.92e-25!112;UBERON:0002371!7.04e-17!80;UBERON:0001474!2.17e-14!86;UBERON:0002405!1.80e-13!115;UBERON:0004765!3.30e-10!101;UBERON:0001434!3.30e-10!101;UBERON:0003081!1.57e-09!216;UBERON:0000178!8.41e-09!15;UBERON:0000179!8.41e-09!15;UBERON:0000463!8.41e-09!15;UBERON:0002384!9.90e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.07e-08;15!UBERON:0000179;3.07e-08;15!UBERON:0000463;3.07e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.43e-30,98;UBERON:0003061,5.43e-30,98;UBERON:0002193,2.26e-27,108;UBERON:0002405,1.68e-20,93;UBERON:0002371,5.07e-19,76;UBERON:0001474,6.46e-17,82;UBERON:0004765,1.46e-14,90;UBERON:0001434,3.55e-12,100;UBERON:0002384,1.79e-10,371;UBERON:0003081,1.45e-09,203;UBERON:0000178,2.40e-08,15;UBERON:0000179,2.40e-08,15;UBERON:0000463,2.40e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0.764134057479513,0.57470412614962,0.393553906568396,16.9146639045029,5.75744097145819,5.10893206943051,0,0,0,0.697204805222715,0.284338464974843,0.587200878669695,2.76997704265939,4.01088894940283,3.25516306073778,0.223915474239924,0.971680998056939,1.03030227053675,7.12451370019867,9.82477453590904,7.5201058968223,6.0431549595478,6.98985409637104,4.64559556342655,0.575384784644301,2.30544635876191,0.945928919554341,5.86067657252252,8.39130088658974,6.77132432971709,6.96496656307637,7.64137220161968,1.34834090667051,3.06083892370903,2.56743221660875,2.55734850319616,0.329851300186716,2.79249120670285,0,0.290209238628584,1.70215567407342,0,5.02497330513487,2.08593167368081,1.95469960234605,1.21079900526674,0.736555271975129,0,1.69004229049553,1.4882300997553,0.628975936525128,3.14520167210186,4.05477610672067,0.803627933485401,0,1.59133341759272,0.365328307529268,1.75996244461323,4.36910889009705,0.889509253863555,2.13365111283254,2.00197993518006,0,2.64417949113945,1.90810750907073,25.6145836099252,17.6171156811282,19.8782078625119,2.64342657158052,1.68152568894461,0.263384084775077,2.360517241366,10.6112905942274,22.616164889946,1.17030546773475,7.49621213257258,6.15482147455153,3.89653456815823,0.668462741311041,9.42738903919479,4.87374568083967,1.89562704635511,1.15282187753108,1.56071217071854,0.328875809207352,0,0,5.19002971067211,5.35081656179426,9.40819714244791,0,3.44898444241729,6.18529401868734,4.55435445635105,0.318565414324097,0.651083453856419,1.90090408889675,0.752875595388864,0.76791966692651,1.24930726552346,0.710331756132051,0.821127996921047,8.46748321543876,12.0348088102578,9.99288386791313,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,0.398873881556595,6.43924685624423,6.86393892936153,2.22874500797739,0.198762407366705,1.72046919021225,0.694281003215189,0,0,0.275118041940067,0.835979866147242,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,2.43042584364528,0,0,0.112611480483322,0,0,0.549605231791222,31.6273001846552,62.0448422637321,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0.217879444092406,0.237270619111097,0.674156540800822,0.196221465125346,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0.784596007954691,4.72873824484625,6.253199670926,6.28880877770767,0,0,0.773288812777695,0.167516265334349,1.27587750330633,29.9602809578873,92.7400523532477,22.3784377255459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,8.19713963110744,8.00456683525833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,2.53723804616085,0.764637207142375,0.569647187174163,0.476463550915578,2.05681136543097,1.94541993357815,3.24018862342869,1.58625035258854,0,0,0,0.743212700502875,0.721346064882224,0.711418433484141,0.159426272728822,0.199579371432817,0.383010740264733,0.211673582723883,0,0,0.456469358066384,0.47003968731907,0,0,0.963528450622197,0.605399121573143,1.27753871307098,0.687010689511529,0,0,0.166849141711909,0.586164286206121,0,0,0,0,0,0,0.146508179271894,0,0.66866030566487,0,0,0.296964680832639,0,0,0.140669416410513,0.222617410045812,0,0,0.597743964753209,1.38141957765574,0,0.20453736500431,0.246169610922139,0,0,0,1.02314474045374,2.86065876347107,7.18449277040819,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0.611030144933625,0,0.123563938946503,0.208843899010911,0.067401132980677,0,0,1.27718352450966,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.0821154570532092,1.16386819786103,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,3.09683496446315,0.157204305099666,0.414239055347196,4.96166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14785514998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| ||
|short_description=p4@CXCR4 | |short_description=p4@CXCR4 | ||
}} | }} |
Latest revision as of 02:57, 17 September 2015
Short description: | p4@CXCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CXCR4_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -178bp_to_AY826773_5end |
EntrezGene: | CXCR4 |
HGNC: | 2561 |
UniProt: | Q5MIL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.43e-30 | 98 |
blood island | 5.43e-30 | 98 |
hemolymphoid system | 2.26e-27 | 108 |
immune system | 1.68e-20 | 93 |
bone marrow | 5.07e-19 | 76 |
bone element | 6.46e-17 | 82 |
skeletal element | 1.46e-14 | 90 |
skeletal system | 3.55e-12 | 100 |
connective tissue | 1.79e-10 | 371 |
lateral plate mesoderm | 1.45e-09 | 203 |
blood | 2.40e-08 | 15 |
haemolymphatic fluid | 2.40e-08 | 15 |
organism substance | 2.40e-08 | 15 |