FFCP PHASE1:Hg19::chr7:95115210..95115217,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51666 | |EntrezGene=51666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16009 | |HGNC=16009 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y574,Q14D68,Q8TBT2 | |UniProt=Q9Y574,Q14D68,Q8TBT2 | ||
|association_with_transcript=0bp_to_ENST00000325885,ENST00000428113,NM_016116,NM_145872_5end | |association_with_transcript=0bp_to_ENST00000325885,ENST00000428113,NM_016116,NM_145872_5end | ||
|cluster_id=chr7:95115210..95115217,+ | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_3_at_ASB4_5end | |description=CAGE_peak_3_at_ASB4_5end | ||
|id=chr7:95115210..95115217,+ | |id=chr7:95115210..95115217,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.31e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.31e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.17e-17;2!UBERON:0010056;1.17e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;7.67e-18;2!DOID:3908;6.13e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,7.67e-18,2;DOID:3908,6.13e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.48e-16!2;UBERON:0000341!2.03e-16!2;UBERON:0001723!1.41e-11!3;UBERON:0001033!1.41e-11!3;UBERON:0010056!1.41e-11!3;UBERON:0000989!2.60e-09!1;UBERON:0008811!2.60e-09!1;UBERON:0006258!2.60e-09!1;UBERON:0005876!2.60e-09!1;UBERON:0004874!2.60e-09!1;UBERON:0007023!7.64e-09!115;UBERON:0002336!7.85e-09!1;UBERON:0001018!7.85e-09!1;UBERON:0002473!7.85e-09!1;UBERON:0005340!7.85e-09!1;UBERON:0002316!7.85e-09!1;UBERON:0003544!7.85e-09!1;UBERON:0001020!7.85e-09!1;UBERON:0005970!7.85e-09!1;UBERON:0002437!7.85e-09!1;UBERON:0003296!9.94e-09!4;UBERON:0010133!9.94e-09!4;UBERON:0002022!1.16e-08!1;UBERON:0002368!2.11e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;7.67e-18;2!UBERON:0002173;7.67e-18;2!UBERON:0002186;7.67e-18;2!UBERON:0004821;2.31e-12;3!UBERON:0007499;2.31e-12;3!UBERON:0003215;2.31e-12;3!UBERON:0010368;2.31e-12;3!UBERON:0009911;2.31e-12;3!UBERON:0002299;2.31e-12;3!UBERON:0006524;2.31e-12;3!UBERON:0008874;2.31e-12;3!UBERON:0002169;2.31e-12;3!UBERON:0004894;2.31e-12;3!UBERON:0001723;3.06e-12;3!UBERON:0001033;3.06e-12;3!UBERON:0009856;1.32e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.67e-18,2;UBERON:0002173,7.67e-18,2;UBERON:0002186,7.67e-18,2;UBERON:0004821,2.31e-12,3;UBERON:0003215,2.31e-12,3;UBERON:0010368,2.31e-12,3;UBERON:0009911,2.31e-12,3;UBERON:0002299,2.31e-12,3;UBERON:0006524,2.31e-12,3;UBERON:0008874,2.31e-12,3;UBERON:0002169,2.31e-12,3;UBERON:0004894,2.31e-12,3;UBERON:0001723,2.89e-12,3;UBERON:0001033,2.89e-12,3;UBERON:0010056,2.89e-12,3 | |||
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|short_description=p3@ASB4 | |short_description=p3@ASB4 | ||
}} | }} |
Latest revision as of 04:50, 20 September 2015
Short description: | p3@ASB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ASB4_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | 0bp_to_ENST00000325885, ENST00000428113, NM_016116, NM_145872_5end |
EntrezGene: | ASB4 |
HGNC: | 16009 |
UniProt: | Q9Y574Q14D68Q8TBT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.67e-18 | 2 |
alveolar duct | 7.67e-18 | 2 |
bronchiole | 7.67e-18 | 2 |
pulmonary alveolus epithelium | 2.31e-12 | 3 |
alveolus | 2.31e-12 | 3 |
pulmonary lobule | 2.31e-12 | 3 |
lobule | 2.31e-12 | 3 |
alveolus of lung | 2.31e-12 | 3 |
alveolar system | 2.31e-12 | 3 |
pulmonary acinus | 2.31e-12 | 3 |
alveolar sac | 2.31e-12 | 3 |
alveolar wall | 2.31e-12 | 3 |
tongue | 2.89e-12 | 3 |
gustatory system | 2.89e-12 | 3 |
future tongue | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 7.67e-18 | 2 |
non-small cell lung carcinoma | 6.13e-08 | 5 |