FFCP PHASE1:Hg19::chr7:92463172..92463183,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1021 | |EntrezGene=1021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1777 | |HGNC=1777 | ||
|TSSclassifier=strong | |||
|UniProt=Q00534 | |UniProt=Q00534 | ||
|association_with_transcript=-421bp_to_X66365_5end | |association_with_transcript=-421bp_to_X66365_5end | ||
|cluster_id=chr7:92463172..92463183,- | |||
|coexpression_cluster_id=C2905 | |||
|description=CAGE_peak_12_at_CDK6_5end | |description=CAGE_peak_12_at_CDK6_5end | ||
|id=chr7:92463172..92463183,- | |id=chr7:92463172..92463183,- | ||
|ontology_enrichment_celltype=CL:0000763!8.19e-13!112;CL:0000049!8.19e-13!112;CL:0000988!1.38e-11!182;CL:0000037!7.97e-11!172;CL:0000566!7.97e-11!172;CL:0000557!8.40e-11!71;CL:0002032!6.94e-10!165;CL:0000837!6.94e-10!165;CL:0000839!1.81e-09!70;CL:0002194!1.98e-09!63;CL:0000576!1.98e-09!63;CL:0000040!1.98e-09!63;CL:0000559!1.98e-09!63;CL:0002009!2.12e-09!65;CL:0000860!1.51e-08!45;CL:0002057!2.27e-08!42;CL:0000766!5.06e-08!76;CL:0002031!9.29e-07!124 | |ontology_enrichment_celltype=CL:0000763!8.19e-13!112;CL:0000049!8.19e-13!112;CL:0000988!1.38e-11!182;CL:0000037!7.97e-11!172;CL:0000566!7.97e-11!172;CL:0000557!8.40e-11!71;CL:0002032!6.94e-10!165;CL:0000837!6.94e-10!165;CL:0000839!1.81e-09!70;CL:0002194!1.98e-09!63;CL:0000576!1.98e-09!63;CL:0000040!1.98e-09!63;CL:0000559!1.98e-09!63;CL:0002009!2.12e-09!65;CL:0000860!1.51e-08!45;CL:0002057!2.27e-08!42;CL:0000766!5.06e-08!76;CL:0002031!9.29e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000763;7.79e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.70e-19,108;CL:0000049,3.70e-19,108;CL:0000037,1.57e-18,168;CL:0000988,3.23e-18,177;CL:0002032,2.98e-17,161;CL:0000837,2.98e-17,161;CL:0002194,1.90e-11,59;CL:0000576,1.90e-11,59;CL:0000040,1.90e-11,59;CL:0000559,1.90e-11,59;CL:0002009,6.29e-11,61;CL:0000557,6.56e-11,67;CL:0000839,9.06e-10,66;CL:0000766,1.07e-09,72;CL:0002087,3.60e-09,115;CL:0000034,4.19e-09,441;CL:0000134,5.07e-09,354;CL:0000473,5.87e-09,48;CL:0000234,5.87e-09,48;CL:0000219,6.71e-09,386;CL:0002320,1.31e-08,361;CL:0002031,1.55e-08,120;CL:0000738,1.99e-08,136;CL:0000048,5.44e-08,427;CL:0000860,7.32e-08,42;CL:0002057,7.32e-08,42;CL:0000723,1.07e-07,433;CL:0002393,2.97e-07,9;CL:0002397,2.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000049;5.72e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!1.50e-12!51;DOID:0060083!1.50e-12!51;DOID:1240!7.78e-10!39;DOID:8692!1.65e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.02e-17;39!DOID:8692;2.04e-17;31!DOID:2531;2.79e-15;51!DOID:0060083;2.79e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.64e-26,51;DOID:0060083,1.64e-26,51;DOID:1240,1.90e-22,39;DOID:8692,8.14e-18,31;DOID:0050686,4.69e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.62e-09!80;UBERON:0001474!8.32e-09!86;UBERON:0004765!2.74e-08!101;UBERON:0001434!2.74e-08!101;UBERON:0002390!7.61e-08!102;UBERON:0003061!7.61e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.11e-11,76;UBERON:0001474,2.31e-11,82;UBERON:0002390,1.15e-10,98;UBERON:0003061,1.15e-10,98;UBERON:0002405,2.20e-10,93;UBERON:0004765,7.25e-10,90;UBERON:0001434,3.01e-09,100;UBERON:0002193,3.95e-09,108;UBERON:0002384,1.19e-08,371 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.873765488520689,0,0.123766352960047,0,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0.246242116153576,0,0,0.572471974262113,0.273748850145768,0.376627918784408,0.229240217243854,0.328402357799783,0.0787107813136792,0,0,0,0,0,0,0,0.426507697462265,3.52320527201817,1.66198622559563,1.00272223735071,0.434021741431704,0.223915474239924,0,0,0,0.377875943688809,0.242584061187816,0,0.822335776043652,0,0.863077176966451,0.768482119587302,1.6553756092201,0.689491361473237,1.29096936716765,1.35426486594342,0,0.272906150057846,0,2.14258724659632,0.641858054152187,2.55734850319616,0,0.997318288108159,1.27867425159808,0,0.56738522469114,1.24564449799115,0.251248665256743,1.0429658368404,0.217188844705117,0,0.368277635987565,0.632924774881769,0.422510572623884,1.06302149982522,0.209658645508376,0.112328631146495,0.150176892841506,0.48217676009124,1.42506371870624,2.58591680358817,0.730656615058536,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,2.24203425192614,2.37045676297569,0,0,0,0.334372990781356,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0,0.552700035571697,0,0.14828656316206,0,0,0.453237370790265,0,0,0.253019692019503,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0.434539556882471,0,0.486634870302636,1.13441780596881,0.221729397462564,0.43917392846563,0.0654895377488563,0.364295288292542,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0.25326102332916,1.19168262731897,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.454072282934794,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0.226864366320042,1.07633781413317,0.213557388818567,0,2.10063767259082,0.412210116953756,0,0,0.337552664482532,0.389748020644795,0.504867548488229,0.184099797284599,0.323292113637624,1.42003837006646,0.604512589365842,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0,0.337169380156203,0,0.110293972732394,0,0.474541238222193,0.269662616320329,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,7.94633578946371,0.737930631258681,0,0.548751427043128,0,0.201057944823262,0,0.325808305310325,0,0,0.231860809950154,0.234817388471643,0.288732895522148,0,0,0,0.858486162094873,0.246217006087397,0.234004265139238,0.297262324577456,0.93733833986777,0.503946384596579,0,0.0895585227028483,0.290633938513962,0,0.985326475791887,0.528290604079356,0,0.864719720501769,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.399891964728228,0,1.00451418286425,2.10833939483032,0.718874566474748,0,0,0.579125226670317,0,0,0.336255431980582,0.788123040807709,0,0,2.03275699377971,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0.415941723061614,0,0.315404830067869,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0.195801157462741,0.343143423810856,0.206768026122887,0.431428401637234,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0.177561725313127,0.410635780069046,0,0,0.241718899183244,0,0.0920809889358963,0.459257792658427,0.182091168006717,0.524497659837696,0,0.462092022626489,0,2.92278449306521,0.844413031143006,0,0,0.647747748306418,0,0,0.501689773854853,0.509752546090077,0,0,0,0,0.256450125116389,0,0.325378394664303,0.515205058238611,0,0,0,0.650060246036521,0,0.386682873168488,0.154048617114644,0.307007349452259,0.551346289938122,0.429680979473094,0.290033387828457,0.511359764496605,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0.62962469366128,0,0,0,0,0.18532421910392,0.572499546967965,0.372158369359667,0.949138274156178,0.190630193923825,0,0,0.636406495851874,0,0.359744915166629,0.823611089208164,0.353437207037059,0,0,0,0,1.21856744815642,0,0.136499911407986,0,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,1.44269212976445,3.84165954081436,3.66680427276291,1.39705560002972,0.766021480529467,2.11673582723883,3.57084134302011,3.65036331547496,5.70586697582981,0.47003968731907,0,0.677167111206413,2.24823305145179,5.24679238696724,13.6270796060904,0.343505344755765,2.15068535015921,2.46043718681657,2.33588798396672,0.97694047701020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| ||
|short_description=p12@CDK6 | |short_description=p12@CDK6 | ||
}} | }} |
Latest revision as of 00:40, 20 September 2015
Short description: | p12@CDK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CDK6_5end |
Coexpression cluster: | C2905_granulocyte_lymphoma_acute_Hodgkin_CD34_CD133_neuroblastoma |
Association with transcript: | -421bp_to_X66365_5end |
EntrezGene: | CDK6 |
HGNC: | 1777 |
UniProt: | Q00534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.70e-19 | 108 |
common myeloid progenitor | 3.70e-19 | 108 |
hematopoietic stem cell | 1.57e-18 | 168 |
hematopoietic cell | 3.23e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.98e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.98e-17 | 161 |
monopoietic cell | 1.90e-11 | 59 |
monocyte | 1.90e-11 | 59 |
monoblast | 1.90e-11 | 59 |
promonocyte | 1.90e-11 | 59 |
macrophage dendritic cell progenitor | 6.29e-11 | 61 |
granulocyte monocyte progenitor cell | 6.56e-11 | 67 |
myeloid lineage restricted progenitor cell | 9.06e-10 | 66 |
myeloid leukocyte | 1.07e-09 | 72 |
nongranular leukocyte | 3.60e-09 | 115 |
stem cell | 4.19e-09 | 441 |
mesenchymal cell | 5.07e-09 | 354 |
defensive cell | 5.87e-09 | 48 |
phagocyte | 5.87e-09 | 48 |
motile cell | 6.71e-09 | 386 |
connective tissue cell | 1.31e-08 | 361 |
hematopoietic lineage restricted progenitor cell | 1.55e-08 | 120 |
leukocyte | 1.99e-08 | 136 |
multi fate stem cell | 5.44e-08 | 427 |
classical monocyte | 7.32e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.32e-08 | 42 |
somatic stem cell | 1.07e-07 | 433 |
intermediate monocyte | 2.97e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.11e-11 | 76 |
bone element | 2.31e-11 | 82 |
hematopoietic system | 1.15e-10 | 98 |
blood island | 1.15e-10 | 98 |
immune system | 2.20e-10 | 93 |
skeletal element | 7.25e-10 | 90 |
skeletal system | 3.01e-09 | 100 |
hemolymphoid system | 3.95e-09 | 108 |
connective tissue | 1.19e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.64e-26 | 51 |
immune system cancer | 1.64e-26 | 51 |
leukemia | 1.90e-22 | 39 |
myeloid leukemia | 8.14e-18 | 31 |
organ system cancer | 4.69e-08 | 137 |