FFCP PHASE1:Hg19::chr2:113931513..113931583,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23550 | |EntrezGene=23550 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19096 | |HGNC=19096 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDX1 | |UniProt=Q8NDX1 | ||
|association_with_transcript=0bp_to_ENST00000245796,ENST00000418251,ENST00000441564,ENST00000485525,NM_012455,uc002tjc.2,uc002tjd.2,uc002tje.2_5end | |association_with_transcript=0bp_to_ENST00000245796,ENST00000418251,ENST00000441564,ENST00000485525,NM_012455,uc002tjc.2,uc002tjd.2,uc002tje.2_5end | ||
|cluster_id=chr2:113931513..113931583,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_PSD4_5end | |description=CAGE_peak_1_at_PSD4_5end | ||
|id=chr2:113931513..113931583,+ | |id=chr2:113931513..113931583,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.19e-83!172;CL:0000566!3.19e-83!172;CL:0000988!1.08e-79!182;CL:0002032!4.11e-78!165;CL:0000837!4.11e-78!165;CL:0000738!9.73e-66!140;CL:0002031!3.12e-54!124;CL:0002087!3.27e-53!119;CL:0000763!1.41e-41!112;CL:0000049!1.41e-41!112;CL:0000542!1.91e-32!53;CL:0000051!1.91e-32!53;CL:0000838!4.98e-32!52;CL:0000766!1.29e-25!76;CL:0000557!5.91e-22!71;CL:0000839!5.74e-21!70;CL:0002009!6.19e-20!65;CL:0002194!5.81e-19!63;CL:0000576!5.81e-19!63;CL:0000040!5.81e-19!63;CL:0000559!5.81e-19!63;CL:0000084!9.91e-17!25;CL:0000827!9.91e-17!25;CL:0002057!1.48e-16!42;CL:0000134!8.43e-15!358;CL:0000945!2.05e-14!24;CL:0000826!2.05e-14!24;CL:0000860!2.90e-14!45;CL:0002320!1.33e-13!365;CL:0000791!1.63e-12!18;CL:0000789!1.63e-12!18;CL:0002420!1.63e-12!18;CL:0002419!1.63e-12!18;CL:0000790!1.63e-12!18;CL:0000219!8.86e-10!390;CL:0000236!1.11e-09!14;CL:0000625!1.48e-08!11;CL:0000094!4.99e-07!8 | |ontology_enrichment_celltype=CL:0000037!3.19e-83!172;CL:0000566!3.19e-83!172;CL:0000988!1.08e-79!182;CL:0002032!4.11e-78!165;CL:0000837!4.11e-78!165;CL:0000738!9.73e-66!140;CL:0002031!3.12e-54!124;CL:0002087!3.27e-53!119;CL:0000763!1.41e-41!112;CL:0000049!1.41e-41!112;CL:0000542!1.91e-32!53;CL:0000051!1.91e-32!53;CL:0000838!4.98e-32!52;CL:0000766!1.29e-25!76;CL:0000557!5.91e-22!71;CL:0000839!5.74e-21!70;CL:0002009!6.19e-20!65;CL:0002194!5.81e-19!63;CL:0000576!5.81e-19!63;CL:0000040!5.81e-19!63;CL:0000559!5.81e-19!63;CL:0000084!9.91e-17!25;CL:0000827!9.91e-17!25;CL:0002057!1.48e-16!42;CL:0000134!8.43e-15!358;CL:0000945!2.05e-14!24;CL:0000826!2.05e-14!24;CL:0000860!2.90e-14!45;CL:0002320!1.33e-13!365;CL:0000791!1.63e-12!18;CL:0000789!1.63e-12!18;CL:0002420!1.63e-12!18;CL:0002419!1.63e-12!18;CL:0000790!1.63e-12!18;CL:0000219!8.86e-10!390;CL:0000236!1.11e-09!14;CL:0000625!1.48e-08!11;CL:0000094!4.99e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000542;7.62e-21;53!CL:0000084;2.08e-18;25!CL:0002087;1.08e-16;104!CL:0000738;5.51e-16;136!CL:0000945;6.97e-16;24!CL:0000988;2.55e-15;177!CL:0000763;6.53e-14;100!CL:0000791;1.00e-13;18!CL:0000789;1.00e-13;18!CL:0002419;1.00e-13;18!CL:0000576;4.67e-13;48!CL:0000766;4.68e-13;69!CL:0000473;1.44e-12;39!CL:0000234;1.44e-12;39!CL:0000860;1.89e-12;33!CL:0002057;1.89e-12;33!CL:0000236;5.79e-10;13!CL:0000625;2.49e-09;11!CL:0000094;1.19e-07;8!CL:0000451;4.90e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.06e-97,168;CL:0000988,8.64e-93,177;CL:0002032,3.34e-91,161;CL:0000837,3.34e-91,161;CL:0000738,1.88e-77,136;CL:0002031,1.86e-64,120;CL:0002087,2.13e-63,115;CL:0000763,6.41e-50,108;CL:0000049,6.41e-50,108;CL:0000542,6.98e-36,53;CL:0000051,6.98e-36,53;CL:0000838,2.03e-35,52;CL:0000766,6.00e-32,72;CL:0000557,1.16e-27,67;CL:0000839,1.74e-26,66;CL:0002009,2.12e-25,61;CL:0002194,2.84e-24,59;CL:0000576,2.84e-24,59;CL:0000040,2.84e-24,59;CL:0000559,2.84e-24,59;CL:0000473,1.70e-20,48;CL:0000234,1.70e-20,48;CL:0000084,2.07e-18,25;CL:0000827,2.07e-18,25;CL:0000860,3.24e-18,42;CL:0002057,3.24e-18,42;CL:0000134,8.62e-18,354;CL:0002320,2.22e-16,361;CL:0000945,7.74e-16,24;CL:0000826,7.74e-16,24;CL:0000791,9.98e-14,18;CL:0000789,9.98e-14,18;CL:0002420,9.98e-14,18;CL:0002419,9.98e-14,18;CL:0000790,9.98e-14,18;CL:0000219,2.96e-12,386;CL:0000236,1.39e-10,14;CL:0000625,2.48e-09,11;CL:0000094,1.23e-07,8;CL:0000451,5.24e-07,10;CL:0000048,9.42e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000051;7.62e-21;53!CL:0000790;1.00e-13;18!CL:0000049;1.05e-13;108!CL:0002057;3.28e-13;42 | |||
|ontology_enrichment_disease=DOID:2531!2.82e-22!51;DOID:0060083!2.82e-22!51;DOID:1240!4.49e-18!39;DOID:8692!5.28e-14!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.90e-15;39!DOID:2531;3.36e-15;51!DOID:0060083;3.36e-15;51!DOID:8692;6.28e-15;31!DOID:0060058;4.70e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.11e-24,51;DOID:0060083,1.11e-24,51;DOID:1240,6.64e-20,39;DOID:8692,2.21e-15,31;DOID:0060058,4.79e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.05e-31!102;UBERON:0003061!1.05e-31!102;UBERON:0002193!2.10e-27!112;UBERON:0002371!7.73e-19!80;UBERON:0002405!3.65e-17!115;UBERON:0001474!1.18e-15!86;UBERON:0007023!2.90e-13!115;UBERON:0002384!2.12e-12!375;UBERON:0000178!7.48e-11!15;UBERON:0000179!7.48e-11!15;UBERON:0000463!7.48e-11!15;UBERON:0004765!1.51e-10!101;UBERON:0001434!1.51e-10!101 | |ontology_enrichment_uberon=UBERON:0002390!1.05e-31!102;UBERON:0003061!1.05e-31!102;UBERON:0002193!2.10e-27!112;UBERON:0002371!7.73e-19!80;UBERON:0002405!3.65e-17!115;UBERON:0001474!1.18e-15!86;UBERON:0007023!2.90e-13!115;UBERON:0002384!2.12e-12!375;UBERON:0000178!7.48e-11!15;UBERON:0000179!7.48e-11!15;UBERON:0000463!7.48e-11!15;UBERON:0004765!1.51e-10!101;UBERON:0001434!1.51e-10!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.15e-12;15!UBERON:0000179;7.15e-12;15!UBERON:0000463;7.15e-12;15!UBERON:0002390;4.78e-09;32 | |||
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| ||
|short_description=p1@PSD4 | |short_description=p1@PSD4 | ||
}} | }} |
Latest revision as of 12:39, 16 September 2015
Short description: | p1@PSD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSD4_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000245796, ENST00000418251, ENST00000441564, ENST00000485525, NM_012455, uc002tjc.2, uc002tjd.2, uc002tje.2_5end |
EntrezGene: | PSD4 |
HGNC: | 19096 |
UniProt: | Q8NDX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.85e-38 | 98 |
blood island | 1.85e-38 | 98 |
hemolymphoid system | 7.13e-34 | 108 |
immune system | 4.63e-24 | 93 |
bone marrow | 1.47e-23 | 76 |
bone element | 5.14e-20 | 82 |
skeletal element | 3.89e-16 | 90 |
connective tissue | 2.84e-15 | 371 |
skeletal system | 9.40e-13 | 100 |
blood | 7.01e-12 | 15 |
haemolymphatic fluid | 7.01e-12 | 15 |
organism substance | 7.01e-12 | 15 |
adult organism | 2.54e-08 | 114 |
lateral plate mesoderm | 2.99e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.11e-24 | 51 |
immune system cancer | 1.11e-24 | 51 |
leukemia | 6.64e-20 | 39 |
myeloid leukemia | 2.21e-15 | 31 |
lymphoma | 4.79e-07 | 10 |